DK951447 |
Clone id |
TST38A01NGRL0011_G24 |
Library |
TST38 |
Length |
682 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_G24. 5' end sequence. |
Accession |
DK951447 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
CTCGCTTCTCACGACCCTGGCTATGGCGAATACAGAAGAGGCTGAGCTTGAGGAAGGCGA AATCCCGAGGGCTCCAAAGCATCGCTTGGAGCGTGCCTGGACTTTCTGGTACGACAATTA CACCGCCAAATCCAAGCAAAAGACTTGGGGAAGCTCTCTTCGCCCCGTCTACACCTTTTC TACCGTGGAGGATTTCTGGGGTATTTACAACAATGTGATCCAACCAAGTCAATTAGCTCA TGGAGCTGACTTTCATTGCTTCAAGGCTGGAATAGAACCAAAGTGGGAGGATCCAATCTG CGCGCGAGGTGGAAAGTGGTCTATCACCTCACCAAGAGGAAAGAGCATGACAGACACTCT CTGGCTTTACACGGTTTTGGCGATGATTGGGGAGCAGTTTACCGAAAGTGATGAAATCTG TGGGGTTGTTGTGAGTATAAGGACTAGACTGGAAAAACTAGCATTGTGGACAAAAACTGC ATCCAATGAAGGAGCACAGATGAGCATCGGCAAGCAGTGGAAAGATCTACTGGACTATCA TGAAAAGATAGGCTTTATAGCTCATGAAGATGCCAAGAGGGATGACAAGGCAGCAAAAAA TAAATACAATGCGTGATTGTTTGGTGGTTCAAACCGCANAAAATGGCTCTGTGGGTTGTC CGAATGGAAGATAGGCTGCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P48599 |
Definition |
sp|P48599|IF4E1_ORYSJ Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica |
Align length |
181 |
Score (bit) |
253.0 |
E-value |
9.0e-67 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S3L2 |
Definition |
tr|A9S3L2|A9S3L2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
183 |
Score (bit) |
261.0 |
E-value |
2.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951447|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_G24, 5' (682 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S3L2|A9S3L2_PHYPA Predicted protein OS=Physcomitrella paten... 261 2e-68 tr|A7QV75|A7QV75_VITVI Chromosome undetermined scaffold_186, who... 259 1e-67 tr|Q00LS7|Q00LS7_NICBE Eukaryotic translation initiation factor ... 258 2e-67 tr|A9S0E0|A9S0E0_PHYPA Predicted protein OS=Physcomitrella paten... 258 3e-67 tr|Q66UV4|Q66UV4_TOBAC Eukaryotic translation initiation factor ... 256 1e-66 tr|A9U1W7|A9U1W7_PHYPA Predicted protein OS=Physcomitrella paten... 256 1e-66 tr|Q0JFN9|Q0JFN9_ORYSJ cDNA clone:J023009L14, full insert sequen... 253 1e-65 tr|A4Q8X0|A4Q8X0_ORYSI Putative uncharacterized protein OS=Oryza... 253 1e-65 tr|Q6TEC4|Q6TEC4_PEA Eukaryotic translation initiation factor 4E... 251 4e-65 tr|B6TBD1|B6TBD1_MAIZE Eukaryotic translation initiation factor ... 251 4e-65 tr|B4G0T4|B4G0T4_MAIZE Putative uncharacterized protein OS=Zea m... 251 4e-65 tr|A9PJ25|A9PJ25_POPJC Putative uncharacterized protein OS=Popul... 250 5e-65 tr|Q7XJB1|Q7XJB1_LACSA Eukaryotic translation initiation factor ... 250 7e-65 tr|Q0GRC7|Q0GRC7_PEA Eukaryotic translation initiation factor 4E... 250 7e-65 tr|B6TFS4|B6TFS4_MAIZE Eukaryotic translation initiation factor ... 250 7e-65 tr|A3A1Y5|A3A1Y5_ORYSJ Putative uncharacterized protein OS=Oryza... 250 7e-65 tr|Q54A13|Q54A13_ARATH Eukaryotic translation initiation factor ... 249 1e-64 tr|A9NNZ6|A9NNZ6_PICSI Putative uncharacterized protein OS=Picea... 249 2e-64 tr|A9S3L1|A9S3L1_PHYPA Predicted protein OS=Physcomitrella paten... 248 2e-64 tr|Q0GRC8|Q0GRC8_PEA Eukaryotic translation initiation factor 4E... 248 3e-64 tr|Q0GRC6|Q0GRC6_PEA Eukaryotic translation initiation factor 4E... 247 4e-64 tr|Q4VQY3|Q4VQY3_SOLLC Eukaryotic translation initiation factor ... 246 1e-63 tr|Q199C0|Q199C0_SOLLC Eukaryotic translation initiation factor ... 246 1e-63 tr|Q199B9|Q199B9_SOLLC Eukaryotic translation initiation factor ... 246 1e-63 tr|Q199B8|Q199B8_SOLLC Eukaryotic translation initiation factor ... 246 1e-63 tr|Q00LT0|Q00LT0_CUCME Eukaryotic translation initiation factor ... 246 1e-63 tr|Q00LS8|Q00LS8_CUCME Eukaryotic translation initiation factor ... 246 1e-63 tr|A7KWF8|A7KWF8_9ROSI Translation initiation factor OS=Cucumis ... 244 3e-63 tr|Q9M4R8|Q9M4R8_SOLLC EIF4E OS=Solanum lycopersicum PE=2 SV=1 244 4e-63 tr|Q6IZE4|Q6IZE4_PEA Eukaryotic translation initiation factor 4E... 244 4e-63
>tr|A9S3L2|A9S3L2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_180874 PE=3 SV=1 Length = 220
Score = 261 bits (668), Expect = 2e-68 Identities = 118/183 (64%), Positives = 141/183 (77%), Gaps = 2/183 (1%) Frame = +2
Query: 65 PRAPKHRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHG 244 PRA KH LE +WTFW+DN K KQ TWGSSLR VYTF TVEDFW YNNV+QPS+L G Sbjct: 36 PRAKKHPLEHSWTFWFDNPNGKQKQATWGSSLRAVYTFDTVEDFWCFYNNVLQPSKLNAG 95
Query: 245 ADFHCFKAGIEPKWEDPICARGGKWSITSPR--GKSMTDTLWLYTVLAMIGEQFTESDEI 418 ADFHCFKAGIEPKWEDP CA GGKW+ PR GK+ DT WL+T+LAMIGEQF ES+EI Sbjct: 96 ADFHCFKAGIEPKWEDPKCAHGGKWTAQPPRSGGKAALDTYWLHTLLAMIGEQFDESEEI 155
Query: 419 CGVVVSIRTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXX 598 CG VVS+R +K+A+WTKTASNE AQ++IGKQWKD++D ++K+G++ HE Sbjct: 156 CGAVVSVRRAQDKIAIWTKTASNEAAQVTIGKQWKDIIDCNDKLGYLVHEDAKRQEKGAK 215
Query: 599 NKY 607 N+Y Sbjct: 216 NRY 218
>tr|A7QV75|A7QV75_VITVI Chromosome undetermined scaffold_186, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007223001 PE=3 SV=1 Length = 236
Score = 259 bits (661), Expect = 1e-67 Identities = 116/176 (65%), Positives = 136/176 (77%) Frame = +2
Query: 80 HRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHGADFHC 259 H LE +WTFW+DN +AKSKQ WGSS+RP+YTFS VE+FW IYNN+ PS+LA GADFHC Sbjct: 61 HPLEHSWTFWFDNPSAKSKQAAWGSSMRPIYTFSNVEEFWSIYNNIHHPSKLAVGADFHC 120
Query: 260 FKAGIEPKWEDPICARGGKWSITSPRGKSMTDTLWLYTVLAMIGEQFTESDEICGVVVSI 439 FK IEPKWEDP+CA GGKW++T +GKS DT WLYT+LAMIGEQF DEICG V+++ Sbjct: 121 FKHKIEPKWEDPVCANGGKWTVTFAKGKS--DTCWLYTLLAMIGEQFDHGDEICGAVINV 178
Query: 440 RTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNKY 607 R R EK+ALWTK ASNE AQ+SIGKQWK+ LDY E IGFI HE N+Y Sbjct: 179 RARQEKIALWTKNASNEAAQLSIGKQWKEFLDYSESIGFIFHEDAKKLDRAAKNRY 234
>tr|Q00LS7|Q00LS7_NICBE Eukaryotic translation initiation factor 4E OS=Nicotiana benthamiana PE=2 SV=1 Length = 222
Score = 258 bits (659), Expect = 2e-67 Identities = 115/182 (63%), Positives = 142/182 (78%) Frame = +2
Query: 68 RAPKHRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHGA 247 +A KH LE +WTFW+DN + KSKQ WGSS+RP+YTFSTVEDFW +YNN+ PS+LA GA Sbjct: 43 KAMKHPLEHSWTFWFDNPSGKSKQAAWGSSIRPIYTFSTVEDFWSVYNNIHHPSKLAVGA 102
Query: 248 DFHCFKAGIEPKWEDPICARGGKWSITSPRGKSMTDTLWLYTVLAMIGEQFTESDEICGV 427 DFHCFK IEPKWEDP+CA GGKW+++ RGKS DT WLYT+LAMIGEQF DEICG Sbjct: 103 DFHCFKNKIEPKWEDPVCANGGKWTMSFSRGKS--DTCWLYTLLAMIGEQFDCGDEICGA 160
Query: 428 VVSIRTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNKY 607 V+++R R EK+ALWT+ A+NE AQ+SIGKQWK+ LDY++ IGFI H+ N+Y Sbjct: 161 VINVRVRQEKIALWTRNAANETAQVSIGKQWKEFLDYNDSIGFIFHDDAKKLDRAAKNRY 220
Query: 608 NA 613 +A Sbjct: 221 SA 222
>tr|A9S0E0|A9S0E0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162107 PE=3 SV=1 Length = 220
Score = 258 bits (658), Expect = 3e-67 Identities = 115/179 (64%), Positives = 139/179 (77%), Gaps = 2/179 (1%) Frame = +2
Query: 77 KHRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHGADFH 256 KH LE +WTFW+DN K KQ TWGSSLR VYTF TVE+FW +YNN++QPS+L GADFH Sbjct: 40 KHPLEHSWTFWFDNPNGKQKQATWGSSLRSVYTFHTVEEFWCLYNNILQPSKLIAGADFH 99
Query: 257 CFKAGIEPKWEDPICARGGKWSITSPR--GKSMTDTLWLYTVLAMIGEQFTESDEICGVV 430 CFK+GIEPKWEDP CA GGKW+ PR GK++ DT WL+T+LAMIGEQF E DEICG V Sbjct: 100 CFKSGIEPKWEDPKCAHGGKWTAQPPRSGGKAVLDTYWLHTLLAMIGEQFDEGDEICGAV 159
Query: 431 VSIRTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNKY 607 VS+R +K+A+WTKTASNE AQ+SI KQWKD+LDY++KIG++ HE N+Y Sbjct: 160 VSVRRAQDKIAIWTKTASNEAAQVSIAKQWKDVLDYNDKIGYLVHEDAKRQDKNAKNRY 218
>tr|Q66UV4|Q66UV4_TOBAC Eukaryotic translation initiation factor eIF4E OS=Nicotiana tabacum PE=2 SV=1 Length = 222
Score = 256 bits (653), Expect = 1e-66 Identities = 113/180 (62%), Positives = 140/180 (77%) Frame = +2
Query: 71 APKHRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHGAD 250 A KH LE +WTFW+DN + KSKQ WGSS+RP+YTFSTVEDFW +YNN+ PS+LA GAD Sbjct: 44 AMKHALEHSWTFWFDNPSGKSKQAAWGSSIRPIYTFSTVEDFWSVYNNIHHPSKLAVGAD 103
Query: 251 FHCFKAGIEPKWEDPICARGGKWSITSPRGKSMTDTLWLYTVLAMIGEQFTESDEICGVV 430 FHCFK IEPKWEDP+CA GGKW+++ RGKS DT WLYT+LAMIGEQF DEICG V Sbjct: 104 FHCFKNKIEPKWEDPVCANGGKWTMSFSRGKS--DTCWLYTLLAMIGEQFDCGDEICGAV 161
Query: 431 VSIRTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNKYN 610 +++R R EK+ALWT+ A+NE AQ+SIGKQWK+ LDY++ +GFI H+ N+Y+ Sbjct: 162 INVRVRQEKIALWTRNAANETAQVSIGKQWKEFLDYNDSVGFIFHDDAKKLDRAAKNRYS 221
>tr|A9U1W7|A9U1W7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227546 PE=3 SV=1 Length = 220
Score = 256 bits (653), Expect = 1e-66 Identities = 114/179 (63%), Positives = 139/179 (77%), Gaps = 2/179 (1%) Frame = +2
Query: 77 KHRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHGADFH 256 KH LE +WTFW+DN K KQ TWGSSLR VYTF TVE+FW +YNNV+QPS+L GADFH Sbjct: 40 KHPLEHSWTFWFDNPGGKQKQATWGSSLRAVYTFHTVEEFWCLYNNVLQPSKLIQGADFH 99
Query: 257 CFKAGIEPKWEDPICARGGKWSITSPR--GKSMTDTLWLYTVLAMIGEQFTESDEICGVV 430 CFK+GIEPKWEDP CA GGKW+ PR GK++ DT WL+T+LAMIGEQF E DEICG V Sbjct: 100 CFKSGIEPKWEDPKCAHGGKWTAQPPRSGGKAILDTYWLHTLLAMIGEQFDEGDEICGAV 159
Query: 431 VSIRTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNKY 607 VS+R +K+A+WTKTASNE AQ+SI KQWK++LDY++K+G++ HE N+Y Sbjct: 160 VSVRRAQDKIAIWTKTASNEAAQVSIAKQWKEVLDYNDKLGYLVHEDAKRQDKSAKNRY 218
>tr|Q0JFN9|Q0JFN9_ORYSJ cDNA clone:J023009L14, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1 Length = 227
Score = 253 bits (645), Expect = 1e-65 Identities = 115/181 (63%), Positives = 138/181 (76%) Frame = +2
Query: 65 PRAPKHRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHG 244 P AP H LE AWTFW+DN KSKQ TWGSS+RP++TFSTVEDFW +YNN+ PS+L G Sbjct: 48 PAAP-HPLEHAWTFWFDNPQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVG 106
Query: 245 ADFHCFKAGIEPKWEDPICARGGKWSITSPRGKSMTDTLWLYTVLAMIGEQFTESDEICG 424 ADFHCFK IEPKWEDPICA GGKW+ + RGKS DT+WL+T+LAMIGEQF DEICG Sbjct: 107 ADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKS--DTMWLHTLLAMIGEQFDYGDEICG 164
Query: 425 VVVSIRTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNK 604 VVS+R + E++A+WTK A+NE AQ+SIGKQWK+ LDY + IGFI H+ N+ Sbjct: 165 AVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFLDYKDSIGFIVHDDAKKMDKGLKNR 224
Query: 605 Y 607 Y Sbjct: 225 Y 225
>tr|A4Q8X0|A4Q8X0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=eIF4E PE=2 SV=1 Length = 227
Score = 253 bits (645), Expect = 1e-65 Identities = 115/181 (63%), Positives = 138/181 (76%) Frame = +2
Query: 65 PRAPKHRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHG 244 P AP H LE AWTFW+DN KSKQ TWGSS+RP++TFSTVEDFW +YNN+ PS+L G Sbjct: 48 PAAP-HPLEHAWTFWFDNPQGKSKQATWGSSIRPIHTFSTVEDFWSLYNNIHHPSKLVVG 106
Query: 245 ADFHCFKAGIEPKWEDPICARGGKWSITSPRGKSMTDTLWLYTVLAMIGEQFTESDEICG 424 ADFHCFK IEPKWEDPICA GGKW+ + RGKS DT+WL+T+LAMIGEQF DEICG Sbjct: 107 ADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKS--DTMWLHTLLAMIGEQFDYGDEICG 164
Query: 425 VVVSIRTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNK 604 VVS+R + E++A+WTK A+NE AQ+SIGKQWK+ LDY + IGFI H+ N+ Sbjct: 165 AVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFLDYKDSIGFIVHDDAKKMDKGLKNR 224
Query: 605 Y 607 Y Sbjct: 225 Y 225
>tr|Q6TEC4|Q6TEC4_PEA Eukaryotic translation initiation factor 4E OS=Pisum sativum GN=SBM-1 PE=2 SV=2 Length = 228
Score = 251 bits (640), Expect = 4e-65 Identities = 113/176 (64%), Positives = 134/176 (76%) Frame = +2
Query: 80 HRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHGADFHC 259 H LE +WTFW+D AKSKQ WGSS+RP+YTFSTVE+FW IYNN+ P +LA GADF+C Sbjct: 53 HLLENSWTFWFDTPAAKSKQAAWGSSMRPIYTFSTVEEFWSIYNNIHHPGKLAVGADFYC 112
Query: 260 FKAGIEPKWEDPICARGGKWSITSPRGKSMTDTLWLYTVLAMIGEQFTESDEICGVVVSI 439 FK IEPKWEDPICA GGKW+ P+GKS DT WLYT+LAMIGEQF DEICG VV++ Sbjct: 113 FKHKIEPKWEDPICANGGKWTANYPKGKS--DTSWLYTLLAMIGEQFDHGDEICGAVVNV 170
Query: 440 RTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNKY 607 R R EK+++WTK ASNE AQ+SIGKQWK+ LDY+E +GFI H+ NKY Sbjct: 171 RGRAEKISIWTKNASNEAAQVSIGKQWKEFLDYNETMGFIFHDDARKLDRNAKNKY 226
>tr|B6TBD1|B6TBD1_MAIZE Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1 Length = 218
Score = 251 bits (640), Expect = 4e-65 Identities = 112/176 (63%), Positives = 137/176 (77%) Frame = +2
Query: 80 HRLERAWTFWYDNYTAKSKQKTWGSSLRPVYTFSTVEDFWGIYNNVIQPSQLAHGADFHC 259 H LE +WTFW+DN +KSKQ WGSS+RP++TFSTVE+FWG+YNN+ PS+L GADFHC Sbjct: 43 HPLEHSWTFWFDNPQSKSKQAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHC 102
Query: 260 FKAGIEPKWEDPICARGGKWSITSPRGKSMTDTLWLYTVLAMIGEQFTESDEICGVVVSI 439 FK IEPKWEDPICA GGKW+I+ RGKS DT WL+T+LAMIGEQF DEICG VVS+ Sbjct: 103 FKNKIEPKWEDPICANGGKWTISCGRGKS--DTFWLHTLLAMIGEQFDYGDEICGAVVSV 160
Query: 440 RTRLEKLALWTKTASNEGAQMSIGKQWKDLLDYHEKIGFIAHEXXXXXXXXXXNKY 607 R + E++A+WTK A+NE AQ+SIGKQWK+LLDY + IGFI H+ N+Y Sbjct: 161 RGKQERIAIWTKNAANEAAQVSIGKQWKELLDYKDSIGFIVHDDAKKMDKGLKNRY 216
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