DK951457 |
Clone id |
TST38A01NGRL0011_H10 |
Library |
TST38 |
Length |
620 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_H10. 5' end sequence. |
Accession |
DK951457 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
- |
Sequence |
GTTAATTTCTATGACAACCTTGCATTTTGTAGGAGTCTCAACATCAACGTACTCCCTTTC TTCCATTTCTATCGTGGCTCTGAGGGCCGCATTGATGCTTTTTCATGTTCTTTGTCTAAG ATTGATAAGCTAAGGGCAGCTGTGGCAAAGTATCAAGCTGATTCGCCTTTTCTCACAAAC AAAATTGGTTCCTCCTGTTCTGAGCTACCAAAGGAGCTCGTTCTATTGTCATCACTAACG AGTGTAGGGGCAGCTGCTTGATCACATGGACCAGCGTCTTTACACAAGTATTCATCAACA AACCATTCTTTGGCCAACTTTGACAGCCACCACATTTCATCTAGGTAGCTGGCCACCATA TTTTTCAACTAAATTGTTCATAGTTGTATAAAATGCTCTTGTTACACAGACAAGCACAAC ATATCATGGCCTTGTACATAAGACACCCCCAGTGGGATTCTCTGAAGTAAGATTGTCAAG GGGGGAAATGCTACAGGGCTTGATCAGTCAAGTGTCATCCATTGGTGGTGTCTCTTTGCT GGAAATATCCTTCTGCGGCCTTTGCCTAAAGTTTCTGGTCGATGTTTAGGTGAAAGAATC CCACCACTTTCTCTTGGTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LEK4 |
Definition |
sp|Q8LEK4|TRXL2_ARATH Thioredoxin-like 2, chloroplastic OS=Arabidopsis thaliana |
Align length |
68 |
Score (bit) |
76.3 |
E-value |
1.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SXM8 |
Definition |
tr|A9SXM8|A9SXM8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
63 |
Score (bit) |
80.9 |
E-value |
6.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951457|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_H10, 5' (620 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SXM8|A9SXM8_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 6e-14 tr|Q2HIH3|Q2HIH3_ARATH At4g26160 OS=Arabidopsis thaliana PE=2 SV=1 76 1e-12 tr|A9NNR0|A9NNR0_PICSI Putative uncharacterized protein OS=Picea... 74 9e-12 tr|Q68BL1|Q68BL1_NANBA Thioredoxin-like protein OS=Nannochloris ... 72 3e-11 tr|B6UHV8|B6UHV8_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1 70 1e-10 tr|B6SJZ6|B6SJZ6_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1 70 1e-10 tr|B4FKI6|B4FKI6_MAIZE Putative uncharacterized protein OS=Zea m... 70 1e-10 tr|Q5TKD8|Q5TKD8_ORYSJ Os05g0200100 protein OS=Oryza sativa subs... 69 2e-10 tr|A3B0W8|A3B0W8_ORYSJ Putative uncharacterized protein OS=Oryza... 69 2e-10 tr|A2Y1C0|A2Y1C0_ORYSI Putative uncharacterized protein OS=Oryza... 69 2e-10 tr|A7PE91|A7PE91_VITVI Chromosome chr11 scaffold_13, whole genom... 67 1e-09 tr|A5AED6|A5AED6_VITVI Putative uncharacterized protein OS=Vitis... 67 1e-09 tr|A8J7H6|A8J7H6_CHLRE Thioredoxin-like protein OS=Chlamydomonas... 66 2e-09 tr|A6N003|A6N003_ORYSI Thioredoxin like 6 (Fragment) OS=Oryza sa... 65 3e-09 tr|A2Q5R3|A2Q5R3_MEDTR Thioredoxin domain 2; Thioredoxin fold OS... 64 5e-09 tr|Q10M18|Q10M18_ORYSJ Thioredoxin-like 1, putative, expressed O... 63 2e-08 tr|B6THP7|B6THP7_MAIZE Thioredoxin-like 1 OS=Zea mays PE=2 SV=1 63 2e-08 tr|A3AHI7|A3AHI7_ORYSJ Putative uncharacterized protein OS=Oryza... 63 2e-08 tr|A2XG84|A2XG84_ORYSI Putative uncharacterized protein OS=Oryza... 63 2e-08 tr|Q00ZH9|Q00ZH9_OSTTA Putative UV-damaged DNA binding factor (I... 62 2e-08 tr|B3H436|B3H436_ARATH Uncharacterized protein At1g08570.4 (Unch... 62 2e-08 tr|A8MQQ7|A8MQQ7_ARATH Uncharacterized protein At1g08570.2 OS=Ar... 62 2e-08 tr|A7PW73|A7PW73_VITVI Chromosome chr8 scaffold_34, whole genome... 62 4e-08 tr|A5AQX7|A5AQX7_VITVI Putative uncharacterized protein OS=Vitis... 62 4e-08 tr|Q40230|Q40230_LILLO Thioredoxin OS=Lilium longiflorum PE=2 SV=1 61 5e-08 tr|B6U6B7|B6U6B7_MAIZE Thioredoxin-like 1 OS=Zea mays PE=2 SV=1 61 5e-08 tr|B4F7S8|B4F7S8_MAIZE Putative uncharacterized protein OS=Zea m... 61 5e-08 tr|Q5ZF47|Q5ZF47_PLAMJ Thioredoxin 2 OS=Plantago major GN=trx2 P... 61 6e-08 tr|Q6Z4N3|Q6Z4N3_ORYSJ Os07g0684100 protein OS=Oryza sativa subs... 60 8e-08 tr|A2YQ16|A2YQ16_ORYSI Putative uncharacterized protein OS=Oryza... 60 8e-08
>tr|A9SXM8|A9SXM8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48042 PE=4 SV=1 Length = 148
Score = 80.9 bits (198), Expect = 6e-14 Identities = 37/63 (58%), Positives = 47/63 (74%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180 VNF +N C+SLNI VLP+FHFYRG+EGR+DAFSCSL+K+ KLR A+A + D + Sbjct: 70 VNFEENKPMCKSLNIKVLPYFHFYRGAEGRLDAFSCSLAKLQKLRDAIALHNTDRCSIGP 129
Query: 181 KIG 189 IG Sbjct: 130 PIG 132
>tr|Q2HIH3|Q2HIH3_ARATH At4g26160 OS=Arabidopsis thaliana PE=2 SV=1 Length = 221
Score = 76.3 bits (186), Expect = 1e-12 Identities = 34/68 (50%), Positives = 50/68 (73%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180 VNF +N + C+SLN+ VLP+FHFYRG++G++++FSCSL+K KLR A+ ++ S + Sbjct: 150 VNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAKFQKLREAIERHNVGS---IS 206
Query: 181 KIGSSCSE 204 I SS SE Sbjct: 207 NISSSASE 214
>tr|A9NNR0|A9NNR0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 248
Score = 73.6 bits (179), Expect = 9e-12 Identities = 31/49 (63%), Positives = 41/49 (83%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147 +NF +N C+SLNI VLP+FHFYRG++GRI++FSCSL+K KLR A+A Sbjct: 163 INFDENKPMCKSLNIKVLPYFHFYRGAQGRIESFSCSLAKFQKLRDAIA 211
>tr|Q68BL1|Q68BL1_NANBA Thioredoxin-like protein OS=Nannochloris bacillaris PE=4 SV=1 Length = 229
Score = 71.6 bits (174), Expect = 3e-11 Identities = 34/73 (46%), Positives = 46/73 (63%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180 +NF +N RSL + VLPFFHFYRG+EGR+ AFS S+SK+ LR A+A + ++ FL Sbjct: 135 INFEENKGLARSLGVKVLPFFHFYRGAEGRVGAFSASVSKVQLLRDAIADFSSERCFLEE 194
Query: 181 KIGSSCSELPKEL 219 + E P L Sbjct: 195 VPEAPLPEFPSIL 207
>tr|B6UHV8|B6UHV8_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1 Length = 222
Score = 70.1 bits (170), Expect = 1e-10 Identities = 30/51 (58%), Positives = 40/51 (78%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKY 153 VNF +N C+ LN+ VLPFFHFYRG++G ++AFSCSL+K KL+ AVA + Sbjct: 138 VNFDENKPMCKRLNVKVLPFFHFYRGADGLLEAFSCSLAKFQKLKDAVAMH 188
>tr|B6SJZ6|B6SJZ6_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1 Length = 243
Score = 69.7 bits (169), Expect = 1e-10 Identities = 27/54 (50%), Positives = 42/54 (77%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQAD 162 VNF +N C+SLN+ VLP+FHFYRG++G++++FSCSL+K K++ A+ + D Sbjct: 159 VNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIRLHNTD 212
>tr|B4FKI6|B4FKI6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 221
Score = 69.7 bits (169), Expect = 1e-10 Identities = 29/51 (56%), Positives = 40/51 (78%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKY 153 VNF +N C+ LN+ VLPFFHFYRG++G ++AFSCSL+K KL+ A+A + Sbjct: 137 VNFDENKPMCKRLNVKVLPFFHFYRGADGLLEAFSCSLAKFQKLKDAIAMH 187
>tr|Q5TKD8|Q5TKD8_ORYSJ Os05g0200100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0017O06.11 PE=2 SV=1 Length = 216
Score = 69.3 bits (168), Expect = 2e-10 Identities = 28/49 (57%), Positives = 40/49 (81%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147 VNF +N C+ LN+ VLP+FHFYRG++G+++AFSCSL+K KL+ A+A Sbjct: 136 VNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIA 184
>tr|A3B0W8|A3B0W8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016690 PE=4 SV=1 Length = 224
Score = 69.3 bits (168), Expect = 2e-10 Identities = 28/49 (57%), Positives = 40/49 (81%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147 VNF +N C+ LN+ VLP+FHFYRG++G+++AFSCSL+K KL+ A+A Sbjct: 144 VNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIA 192
>tr|A2Y1C0|A2Y1C0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18803 PE=4 SV=1 Length = 224
Score = 69.3 bits (168), Expect = 2e-10 Identities = 28/49 (57%), Positives = 40/49 (81%) Frame = +1
Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147 VNF +N C+ LN+ VLP+FHFYRG++G+++AFSCSL+K KL+ A+A Sbjct: 144 VNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIA 192
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