DK951457
Clone id TST38A01NGRL0011_H10
Library
Length 620
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_H10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID -
Sequence
GTTAATTTCTATGACAACCTTGCATTTTGTAGGAGTCTCAACATCAACGTACTCCCTTTC
TTCCATTTCTATCGTGGCTCTGAGGGCCGCATTGATGCTTTTTCATGTTCTTTGTCTAAG
ATTGATAAGCTAAGGGCAGCTGTGGCAAAGTATCAAGCTGATTCGCCTTTTCTCACAAAC
AAAATTGGTTCCTCCTGTTCTGAGCTACCAAAGGAGCTCGTTCTATTGTCATCACTAACG
AGTGTAGGGGCAGCTGCTTGATCACATGGACCAGCGTCTTTACACAAGTATTCATCAACA
AACCATTCTTTGGCCAACTTTGACAGCCACCACATTTCATCTAGGTAGCTGGCCACCATA
TTTTTCAACTAAATTGTTCATAGTTGTATAAAATGCTCTTGTTACACAGACAAGCACAAC
ATATCATGGCCTTGTACATAAGACACCCCCAGTGGGATTCTCTGAAGTAAGATTGTCAAG
GGGGGAAATGCTACAGGGCTTGATCAGTCAAGTGTCATCCATTGGTGGTGTCTCTTTGCT
GGAAATATCCTTCTGCGGCCTTTGCCTAAAGTTTCTGGTCGATGTTTAGGTGAAAGAATC
CCACCACTTTCTCTTGGTGC
■■Homology search results ■■ -
sp_hit_id Q8LEK4
Definition sp|Q8LEK4|TRXL2_ARATH Thioredoxin-like 2, chloroplastic OS=Arabidopsis thaliana
Align length 68
Score (bit) 76.3
E-value 1.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951457|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_H10, 5'
(620 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8LEK4|TRXL2_ARATH Thioredoxin-like 2, chloroplastic OS=Arabi... 76 1e-13
sp|Q8LCT3|TRXL6_ARATH Thioredoxin-like 6, chloroplastic OS=Arabi... 66 1e-10
sp|O64654|TRXL1_ARATH Thioredoxin-like 1 OS=Arabidopsis thaliana... 62 2e-09
sp|O22779|TRXL7_ARATH Thioredoxin-like 7, chloroplastic OS=Arabi... 62 3e-09
sp|Q9XFI1|TRXL3_ARATH Thioredoxin-like 3, chloroplastic OS=Arabi... 58 5e-08
sp|Q11CL2|HSLV_MESSB ATP-dependent protease hslV OS=Mesorhizobiu... 30 7.7
sp|Q07436|EXPA_DROME Protein expanded OS=Drosophila melanogaster... 30 7.7

>sp|Q8LEK4|TRXL2_ARATH Thioredoxin-like 2, chloroplastic
OS=Arabidopsis thaliana GN=At4g26160 PE=2 SV=2
Length = 221

Score = 76.3 bits (186), Expect = 1e-13
Identities = 34/68 (50%), Positives = 50/68 (73%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180
VNF +N + C+SLN+ VLP+FHFYRG++G++++FSCSL+K KLR A+ ++ S +
Sbjct: 150 VNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAKFQKLREAIERHNVGS---IS 206

Query: 181 KIGSSCSE 204
I SS SE
Sbjct: 207 NISSSASE 214


>sp|Q8LCT3|TRXL6_ARATH Thioredoxin-like 6, chloroplastic
OS=Arabidopsis thaliana GN=At4g29670 PE=2 SV=2
Length = 236

Score = 66.2 bits (160), Expect = 1e-10
Identities = 26/43 (60%), Positives = 37/43 (86%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDK 129
VNF +N C+SLN+ VLPFFHFYRG++G++++FSCSL+K+ K
Sbjct: 160 VNFDENKPMCKSLNVRVLPFFHFYRGADGQLESFSCSLAKVKK 202


>sp|O64654|TRXL1_ARATH Thioredoxin-like 1 OS=Arabidopsis thaliana
GN=At1g08570 PE=2 SV=1
Length = 275

Score = 62.4 bits (150), Expect = 2e-09
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180
VN+ ++ + C SL ++VLPFF FYRGS+GR+ +FSC+ + I K R A+AK+ D
Sbjct: 154 VNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPD----RC 209

Query: 181 KIGSSCSELPKELVLLSS 234
+G + KELV L++
Sbjct: 210 SLGPTKGLEEKELVALAA 227


>sp|O22779|TRXL7_ARATH Thioredoxin-like 7, chloroplastic
OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV=1
Length = 273

Score = 61.6 bits (148), Expect = 3e-09
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180
VN+ ++ + C+SLNI+VLPFF FYRGS GR+ +FSC+ + I K + A+ K+ +
Sbjct: 150 VNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEKHGREQ----C 205

Query: 181 KIGSSCSELPKELVLLSS 234
IG + KELV +++
Sbjct: 206 SIGETKGLEEKELVAMAA 223


>sp|Q9XFI1|TRXL3_ARATH Thioredoxin-like 3, chloroplastic
OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV=1
Length = 245

Score = 57.8 bits (138), Expect = 5e-08
Identities = 30/79 (37%), Positives = 49/79 (62%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180
VN + C LN++VLPFF FYRG+EG++ +FSC+++ I+K + A+ K+ ++ L +
Sbjct: 142 VNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINKFKKALDKHGSERCSLGD 201

Query: 181 KIGSSCSELPKELVLLSSL 237
G KEL L+S+
Sbjct: 202 AKGLD----EKELAALASV 216


>sp|Q11CL2|HSLV_MESSB ATP-dependent protease hslV OS=Mesorhizobium
sp. (strain BNC1) GN=hslV PE=3 SV=1
Length = 182

Score = 30.4 bits (67), Expect = 7.7
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = -1

Query: 368 LKNMVASYLDEMWWLS-KLAKEWFVDEYLCKDAGPCDQAAAPTLVSDDNRTSSFGSS--- 201
L+ + Y D++ S +LAK+W D YL + A LV+D N T + +
Sbjct: 69 LEKKLEQYPDQLMRASVELAKDWRTDRYL-------RRLEAMMLVADKNVTLALTGTGDV 121

Query: 200 -EQEEPILFVRKGESA*YFATAALSLSILDKEHEKASMRPSE 78
E EE ++ + G + Y AA +L DK E+ + + E
Sbjct: 122 LEPEEGVMAIGSGGN--YALAAARALIDTDKSAEEIARKAME 161


>sp|Q07436|EXPA_DROME Protein expanded OS=Drosophila melanogaster
GN=ex PE=1 SV=3
Length = 1427

Score = 30.4 bits (67), Expect = 7.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1

Query: 160 DSPFLTNKIGSSCSELPKELVLLSSLTSVGAAA*SHGPASLHKYSST 300
DSP + IGS CS +V+ S + GA++ S P +H SS+
Sbjct: 555 DSPSSQHNIGSQCSSTCSTVVVTSPVNGAGASS-SGAPIPVHSTSSS 600


tr_hit_id A9SXM8
Definition tr|A9SXM8|A9SXM8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 63
Score (bit) 80.9
E-value 6.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951457|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_H10, 5'
(620 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SXM8|A9SXM8_PHYPA Predicted protein (Fragment) OS=Physcomit... 81 6e-14
tr|Q2HIH3|Q2HIH3_ARATH At4g26160 OS=Arabidopsis thaliana PE=2 SV=1 76 1e-12
tr|A9NNR0|A9NNR0_PICSI Putative uncharacterized protein OS=Picea... 74 9e-12
tr|Q68BL1|Q68BL1_NANBA Thioredoxin-like protein OS=Nannochloris ... 72 3e-11
tr|B6UHV8|B6UHV8_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1 70 1e-10
tr|B6SJZ6|B6SJZ6_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1 70 1e-10
tr|B4FKI6|B4FKI6_MAIZE Putative uncharacterized protein OS=Zea m... 70 1e-10
tr|Q5TKD8|Q5TKD8_ORYSJ Os05g0200100 protein OS=Oryza sativa subs... 69 2e-10
tr|A3B0W8|A3B0W8_ORYSJ Putative uncharacterized protein OS=Oryza... 69 2e-10
tr|A2Y1C0|A2Y1C0_ORYSI Putative uncharacterized protein OS=Oryza... 69 2e-10
tr|A7PE91|A7PE91_VITVI Chromosome chr11 scaffold_13, whole genom... 67 1e-09
tr|A5AED6|A5AED6_VITVI Putative uncharacterized protein OS=Vitis... 67 1e-09
tr|A8J7H6|A8J7H6_CHLRE Thioredoxin-like protein OS=Chlamydomonas... 66 2e-09
tr|A6N003|A6N003_ORYSI Thioredoxin like 6 (Fragment) OS=Oryza sa... 65 3e-09
tr|A2Q5R3|A2Q5R3_MEDTR Thioredoxin domain 2; Thioredoxin fold OS... 64 5e-09
tr|Q10M18|Q10M18_ORYSJ Thioredoxin-like 1, putative, expressed O... 63 2e-08
tr|B6THP7|B6THP7_MAIZE Thioredoxin-like 1 OS=Zea mays PE=2 SV=1 63 2e-08
tr|A3AHI7|A3AHI7_ORYSJ Putative uncharacterized protein OS=Oryza... 63 2e-08
tr|A2XG84|A2XG84_ORYSI Putative uncharacterized protein OS=Oryza... 63 2e-08
tr|Q00ZH9|Q00ZH9_OSTTA Putative UV-damaged DNA binding factor (I... 62 2e-08
tr|B3H436|B3H436_ARATH Uncharacterized protein At1g08570.4 (Unch... 62 2e-08
tr|A8MQQ7|A8MQQ7_ARATH Uncharacterized protein At1g08570.2 OS=Ar... 62 2e-08
tr|A7PW73|A7PW73_VITVI Chromosome chr8 scaffold_34, whole genome... 62 4e-08
tr|A5AQX7|A5AQX7_VITVI Putative uncharacterized protein OS=Vitis... 62 4e-08
tr|Q40230|Q40230_LILLO Thioredoxin OS=Lilium longiflorum PE=2 SV=1 61 5e-08
tr|B6U6B7|B6U6B7_MAIZE Thioredoxin-like 1 OS=Zea mays PE=2 SV=1 61 5e-08
tr|B4F7S8|B4F7S8_MAIZE Putative uncharacterized protein OS=Zea m... 61 5e-08
tr|Q5ZF47|Q5ZF47_PLAMJ Thioredoxin 2 OS=Plantago major GN=trx2 P... 61 6e-08
tr|Q6Z4N3|Q6Z4N3_ORYSJ Os07g0684100 protein OS=Oryza sativa subs... 60 8e-08
tr|A2YQ16|A2YQ16_ORYSI Putative uncharacterized protein OS=Oryza... 60 8e-08

>tr|A9SXM8|A9SXM8_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_48042 PE=4 SV=1
Length = 148

Score = 80.9 bits (198), Expect = 6e-14
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180
VNF +N C+SLNI VLP+FHFYRG+EGR+DAFSCSL+K+ KLR A+A + D +
Sbjct: 70 VNFEENKPMCKSLNIKVLPYFHFYRGAEGRLDAFSCSLAKLQKLRDAIALHNTDRCSIGP 129

Query: 181 KIG 189
IG
Sbjct: 130 PIG 132


>tr|Q2HIH3|Q2HIH3_ARATH At4g26160 OS=Arabidopsis thaliana PE=2 SV=1
Length = 221

Score = 76.3 bits (186), Expect = 1e-12
Identities = 34/68 (50%), Positives = 50/68 (73%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180
VNF +N + C+SLN+ VLP+FHFYRG++G++++FSCSL+K KLR A+ ++ S +
Sbjct: 150 VNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAKFQKLREAIERHNVGS---IS 206

Query: 181 KIGSSCSE 204
I SS SE
Sbjct: 207 NISSSASE 214


>tr|A9NNR0|A9NNR0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 248

Score = 73.6 bits (179), Expect = 9e-12
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147
+NF +N C+SLNI VLP+FHFYRG++GRI++FSCSL+K KLR A+A
Sbjct: 163 INFDENKPMCKSLNIKVLPYFHFYRGAQGRIESFSCSLAKFQKLRDAIA 211


>tr|Q68BL1|Q68BL1_NANBA Thioredoxin-like protein OS=Nannochloris
bacillaris PE=4 SV=1
Length = 229

Score = 71.6 bits (174), Expect = 3e-11
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQADSPFLTN 180
+NF +N RSL + VLPFFHFYRG+EGR+ AFS S+SK+ LR A+A + ++ FL
Sbjct: 135 INFEENKGLARSLGVKVLPFFHFYRGAEGRVGAFSASVSKVQLLRDAIADFSSERCFLEE 194

Query: 181 KIGSSCSELPKEL 219
+ E P L
Sbjct: 195 VPEAPLPEFPSIL 207


>tr|B6UHV8|B6UHV8_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1
Length = 222

Score = 70.1 bits (170), Expect = 1e-10
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKY 153
VNF +N C+ LN+ VLPFFHFYRG++G ++AFSCSL+K KL+ AVA +
Sbjct: 138 VNFDENKPMCKRLNVKVLPFFHFYRGADGLLEAFSCSLAKFQKLKDAVAMH 188


>tr|B6SJZ6|B6SJZ6_MAIZE Thioredoxin-like 6 OS=Zea mays PE=2 SV=1
Length = 243

Score = 69.7 bits (169), Expect = 1e-10
Identities = 27/54 (50%), Positives = 42/54 (77%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKYQAD 162
VNF +N C+SLN+ VLP+FHFYRG++G++++FSCSL+K K++ A+ + D
Sbjct: 159 VNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIRLHNTD 212


>tr|B4FKI6|B4FKI6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 221

Score = 69.7 bits (169), Expect = 1e-10
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVAKY 153
VNF +N C+ LN+ VLPFFHFYRG++G ++AFSCSL+K KL+ A+A +
Sbjct: 137 VNFDENKPMCKRLNVKVLPFFHFYRGADGLLEAFSCSLAKFQKLKDAIAMH 187


>tr|Q5TKD8|Q5TKD8_ORYSJ Os05g0200100 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0017O06.11 PE=2 SV=1
Length = 216

Score = 69.3 bits (168), Expect = 2e-10
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147
VNF +N C+ LN+ VLP+FHFYRG++G+++AFSCSL+K KL+ A+A
Sbjct: 136 VNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIA 184


>tr|A3B0W8|A3B0W8_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_016690 PE=4 SV=1
Length = 224

Score = 69.3 bits (168), Expect = 2e-10
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147
VNF +N C+ LN+ VLP+FHFYRG++G+++AFSCSL+K KL+ A+A
Sbjct: 144 VNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIA 192


>tr|A2Y1C0|A2Y1C0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18803 PE=4 SV=1
Length = 224

Score = 69.3 bits (168), Expect = 2e-10
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = +1

Query: 1 VNFYDNLAFCRSLNINVLPFFHFYRGSEGRIDAFSCSLSKIDKLRAAVA 147
VNF +N C+ LN+ VLP+FHFYRG++G+++AFSCSL+K KL+ A+A
Sbjct: 144 VNFDENKPMCKRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIA 192