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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951472
Clone id TST38A01NGRL0011_I02
Library
Length 686
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_I02. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CACAGGAGTAGAAAATGGCGCCCGCTGCTGCCGCGGCAGCGAGCAGTGGCAGTGCCGCCT
TCTCCTGTCCCACTCTCTCCCGAGTACCTGCCCACTCCTCGACACTCTTCTCCTTCTTCT
CCAGATCACGTGCCCCCCGCTACTTCCTTCAGCCTCAGCCTCAGCTGGCGTTGATGATGG
GTGGCCTACACATTGTCCGCGCTGAGAGTAGTGTGGATGAGGCCACCCCCCCGGCAGATG
ATCCGCCGCCGCCGCCTCCCAAGCAGAGCGTGCTTGAAGCTCTCGATTTCTCTGCCGTCC
GTTCTCAAGACGACGCCCAGCTCCTGGACGATGCTCGCTATGCTACCAACATGGGCGAGA
AGATGAGCCGCGAGCAGTATGCGGCCTTGAGAAGGAAGATAGGTGGCACGTACAGAGACT
TCTTCAAGGACTCTATCGAAGTGGAAGGGGAGTTCGTGGATGAAGGGTGGGTGGATAAGA
GCTGCAGATTCTGCAAGAAAGACACAGCGTCTGAAGCCCGCACCGTTGATAAGTTTGGTC
GGTACGCACACATTTCCTGCTTGGACAACTCCAAATCCAAATCGGGCAACTTCTTCACTC
GCCTCTTTGGAATGTAGACAACCTAAATTCTAATATTGTAATTGTGGACTGTGGCATATT
TTGTTTCAACAACCTAACCTACATAC
■■Homology search results ■■ -
sp_hit_id A7GWZ2
Definition sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter curvus (strain 525.92)
Align length 58
Score (bit) 32.3
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951472|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_I02, 5'
         (686 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter c...    32   2.4  
sp|O84716|PPCK_CHLTR Phosphoenolpyruvate carboxykinase [GTP] OS=...    32   4.1  
sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3 lysi...    31   5.4  
sp|Q5TCQ9|MAGI3_HUMAN Membrane-associated guanylate kinase, WW a...    31   5.4  
sp|Q68772|RPOA_SHFV Replicase polyprotein 1ab OS=Simian hemorrha...    31   7.1  
sp|Q01656|RSP4_CHLRE Flagellar radial spoke protein 4 OS=Chlamyd...    30   9.2  

>sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter
           curvus (strain 525.92) GN=engA PE=3 SV=1
          Length = 461

 Score = 32.3 bits (72), Expect = 2.4
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = +3

Query: 375 QYAALRRKIGGTYRDFFKDSIEVEGE---FVDEGWVDKSCRFCKK---DTASEARTVD 530
           Q  A+  +I GT RD  K  IEVEG+    +D G +D+S    K     T +EA+  D
Sbjct: 24  QRIAITSEISGTTRDTNKAKIEVEGKDCLLIDSGGLDESSELFKNVKFKTLAEAKNSD 81


>sp|O84716|PPCK_CHLTR Phosphoenolpyruvate carboxykinase [GTP]
           OS=Chlamydia trachomatis GN=pckG PE=3 SV=1
          Length = 599

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 409 RTETSSRTLSKWKGSSWMKGGWIRAADSARKTQRLKPAPLISLVGTHTFPAWTTP 573
           +T T  + +  WKG +W+ GG   A  +AR T  L   P +        P W  P
Sbjct: 354 KTTTPPQGMIDWKGRTWVSGGEPAAHPNARFTAPLDHCPSLD-------PQWNNP 401


>sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3
           lysine-4 specific OS=Cryptococcus neoformans GN=SET1
           PE=3 SV=1
          Length = 1469

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 17/67 (25%), Positives = 30/67 (44%)
 Frame = -3

Query: 342 HSEHRPGAGRRLENGRQRNRELQARSAWEAAAADHLPGGWPHPHYSQRGQCVGHPSSTPA 163
           HS   PG G+  +NG+ R+R L    + E  ++      +   +  QR +    PS +P 
Sbjct: 177 HSHREPGRGKEHQNGQGRDRSLYRDHSRERESSRDERDRYSEEYKHQRSKARFSPSPSPE 236

Query: 162 EAEAEGS 142
            +  + S
Sbjct: 237 RSRLKSS 243


>sp|Q5TCQ9|MAGI3_HUMAN Membrane-associated guanylate kinase, WW and
            PDZ domain-containing protein 3 OS=Homo sapiens GN=MAGI3
            PE=1 SV=2
          Length = 1506

 Score = 31.2 bits (69), Expect = 5.4
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 463  KGGWIRAADSARKTQRLKPAPLISLVGTHTFPA-WTTPNPNRATSSLASLECRQ 621
            KG  + AAD  ++T R KP     +  T   P  W  P+ N+ T ++   E RQ
Sbjct: 1453 KGKELEAADKNKETGRFKPESSSPVKKTLITPGPWKVPSGNKVTGTIGMAEKRQ 1506


>sp|Q68772|RPOA_SHFV Replicase polyprotein 1ab OS=Simian hemorrhagic
            fever virus GN=rep PE=2 SV=3
          Length = 3596

 Score = 30.8 bits (68), Expect = 7.1
 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
 Frame = -1

Query: 617  LHSKEASEEVARFGFGVVQAGNVCVPTKLIN-GAGFRRCVFLAESAALIHPPFIHELPFH 441
            L  K A   + RFG  +  A   C  TKL++   G    +F  + A    P      P+H
Sbjct: 3017 LMKKNALHAIYRFGQNICNAIQPCYSTKLVSQRQGDTEVIFQTKFA----PRGKVLTPYH 3072

Query: 440  FDRVLEEVSVRAT----------YLPSQGRILLAAHLL 357
             DRV   V++ ++          YLP++G + LA  L+
Sbjct: 3073 RDRVGAAVTIDSSQGSTYDVVTLYLPTKGSLTLARGLV 3110


>sp|Q01656|RSP4_CHLRE Flagellar radial spoke protein 4
           OS=Chlamydomonas reinhardtii GN=RSP4 PE=3 SV=1
          Length = 465

 Score = 30.4 bits (67), Expect = 9.2
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
 Frame = -3

Query: 282 ELQARSAWEAAAADHL--PGGWPH--PHYSQRGQCVGHPSSTPAEAEAE 148
           EL+    WE  A   +  P  W H  PH   +G+C  H    P +A+ +
Sbjct: 298 ELERAEDWEPPAGREMAAPTAWVHVRPHLKSQGRCEVHKRELPEDADED 346
tr_hit_id B8LP25
Definition tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 115
Score (bit) 171.0
E-value 3.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951472|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_I02, 5'
         (686 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea...   171   3e-41
tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genom...   164   4e-39
tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis...   164   4e-39
tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment) OS=Physcomit...   162   2e-38
tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_2...   161   3e-38
tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea m...   154   7e-36
tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea m...   154   7e-36
tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02...   152   2e-35
tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza...   152   2e-35
tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus ...    64   7e-09
tr|A4S9S3|A4S9S3_OSTLU Predicted protein OS=Ostreococcus lucimar...    60   1e-07
tr|B8AUK3|B8AUK3_ORYSI Putative uncharacterized protein OS=Oryza...    37   1.5  
tr|A5UQT4|A5UQT4_ROSS1 Cobalamin (Vitamin B12) biosynthesis CbiX...    35   4.5  
tr|Q5M6A3|Q5M6A3_STRT2 Polar amino acid ABC uptake transporter A...    34   7.7  
tr|Q5M1R2|Q5M1R2_STRT1 Amino acid (Glutamine) ABC transporter AT...    34   7.7  
tr|Q03MN8|Q03MN8_STRTD ABC-type polar amino acid transport syste...    34   7.7  

>tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 202

 Score =  171 bits (434), Expect = 3e-41
 Identities = 80/115 (69%), Positives = 98/115 (85%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           S+ EALDFS VRS++DA LL+DAR AT  G++MSREQYAALRRKIGGTY+DFFK  +EVE
Sbjct: 89  SITEALDFSEVRSEEDAVLLEDARDATKSGDRMSREQYAALRRKIGGTYQDFFKGYVEVE 148

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLFG 611
           GE+V+EGWVDK+C+ CKKDT++E R VD  GRYAH++C+   K +SGNFFTRLFG
Sbjct: 149 GEYVEEGWVDKTCKICKKDTSNEPRNVDAMGRYAHVACM--KKDESGNFFTRLFG 201


>tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029417001
           PE=4 SV=1
          Length = 176

 Score =  164 bits (416), Expect = 4e-39
 Identities = 78/114 (68%), Positives = 94/114 (82%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           SV EALDFS VRS +DAQLL+ AR AT  G +MSREQY ALRRKIGGTY+DFFK  ++V+
Sbjct: 63  SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLF 608
           G++V+EGWVDK+C+ CK+DT  E R VDKFGRY H++CL+  KS SGNFFTRLF
Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVACLE--KSNSGNFFTRLF 174


>tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043600 PE=4 SV=1
          Length = 176

 Score =  164 bits (416), Expect = 4e-39
 Identities = 78/114 (68%), Positives = 94/114 (82%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           SV EALDFS VRS +DAQLL+ AR AT  G +MSREQY ALRRKIGGTY+DFFK  ++V+
Sbjct: 63  SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLF 608
           G++V+EGWVDK+C+ CK+DT  E R VDKFGRY H++CL+  KS SGNFFTRLF
Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVACLE--KSNSGNFFTRLF 174


>tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_48718 PE=4 SV=1
          Length = 128

 Score =  162 bits (409), Expect = 2e-38
 Identities = 76/115 (66%), Positives = 92/115 (80%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           S+ +ALDF+AVRS+ DA+LL DAR AT  GEKMSREQY ALRRKIGGTY DFFK  +EV+
Sbjct: 15  SLTDALDFAAVRSEKDAELLQDARQATKSGEKMSREQYGALRRKIGGTYGDFFKGYVEVD 74

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLFG 611
           G +VDEGWVDK+C++CKKDT    RT D  GRYAH++C +N  +  GNFF+RLFG
Sbjct: 75  GAYVDEGWVDKTCKYCKKDTKGAPRTKDSSGRYAHVACAEN--APKGNFFSRLFG 127


>tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_250
           (Putative uncharacterized protein At3g56290) (Putative
           uncharacterized protein At3g56290; F18O21_250)
           OS=Arabidopsis thaliana GN=F18O21_250 PE=2 SV=1
          Length = 173

 Score =  161 bits (408), Expect = 3e-38
 Identities = 76/111 (68%), Positives = 91/111 (81%)
 Frame = +3

Query: 276 EALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVEGEF 455
           +ALDFS VRS+ DA+LL +AR AT  G KM++EQY ALRRKIGGTY+DFFK  +EV+G++
Sbjct: 63  DALDFSQVRSEKDAELLYEAREATKSGRKMTQEQYGALRRKIGGTYKDFFKSYVEVDGQY 122

Query: 456 VDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLF 608
           V+EGWVDK+C+ CKKDT  EAR VDK GRYAH+SCL N    SGNFFTRLF
Sbjct: 123 VEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSCLQN--PPSGNFFTRLF 171


>tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 162

 Score =  154 bits (388), Expect = 7e-36
 Identities = 71/114 (62%), Positives = 91/114 (79%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           S+ EALDFS VRS+ DA+LL +AR +T  G +M+REQY ALRRKIGGTY+DFFK  +EV+
Sbjct: 49  SITEALDFSQVRSEKDAELLYEARESTRGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLF 608
           G++V+EGWVDK+C+ CKKDT  E R VDK GRYAH++CL+N K    NFF ++F
Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVACLENPKPT--NFFAKIF 160


>tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 162

 Score =  154 bits (388), Expect = 7e-36
 Identities = 71/114 (62%), Positives = 91/114 (79%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           S+ EALDFS VRS+ DA+LL +AR +T  G +M+REQY ALRRKIGGTY+DFFK  +EV+
Sbjct: 49  SITEALDFSQVRSEKDAELLYEARESTKGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLF 608
           G++V+EGWVDK+C+ CKKDT  E R VDK GRYAH++CL+N K    NFF ++F
Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVACLENPKPT--NFFAKIF 160


>tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02.18
           (Putative uncharacterized protein) (Os01g0823600
           protein) OS=Oryza sativa subsp. japonica GN=P0031D02.18
           PE=4 SV=1
          Length = 170

 Score =  152 bits (384), Expect = 2e-35
 Identities = 71/114 (62%), Positives = 90/114 (78%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           S+ EALDFS VRS+ DA+LL +AR AT  G +M++EQY ALRRKIGGTY+DFFK  ++V+
Sbjct: 57  SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLF 608
           GE+V+EGWVDK+C+ CKKDT  E R VDK GRYAH++CL+N K    N F +LF
Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVACLENPKPT--NIFAKLF 168


>tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04255 PE=4 SV=1
          Length = 170

 Score =  152 bits (384), Expect = 2e-35
 Identities = 71/114 (62%), Positives = 90/114 (78%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           S+ EALDFS VRS+ DA+LL +AR AT  G +M++EQY ALRRKIGGTY+DFFK  ++V+
Sbjct: 57  SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116

Query: 447 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDNSKSKSGNFFTRLF 608
           GE+V+EGWVDK+C+ CKKDT  E R VDK GRYAH++CL+N K    N F +LF
Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVACLENPKPT--NIFAKLF 168


>tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus
           tauri GN=Ot18g00990 PE=4 SV=1
          Length = 161

 Score = 64.3 bits (155), Expect = 7e-09
 Identities = 36/71 (50%), Positives = 47/71 (66%)
 Frame = +3

Query: 267 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 446
           SV  ALDF     + D  LL+ AR   N G+KMS EQY ALRRK+GGT   FF ++++V 
Sbjct: 61  SVARALDFQE-DIESDRGLLNAARRMRN-GDKMSTEQYGALRRKVGGTKGGFFGENVDVV 118

Query: 447 GEFVDEGWVDK 479
           G + D+G+VDK
Sbjct: 119 GAYTDKGYVDK 129