DK951480 |
Clone id |
TST38A01NGRL0011_I10 |
Library |
TST38 |
Length |
664 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_I10. 5' end sequence. |
Accession |
DK951480 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL291Contig1 |
Sequence |
GTTGACATCACCCCAGTTCTCTGCTGCTCGATTCATCCAGTCTGCACAGGGATACATGGG TGGAGGAGCAATGATTCGTGGCATGGCACGATTGATGGGGGTCGCAGCAGCAGGGACTGC TGCAATGGCTCCATCATCTTCTCCAGCTTTCTGCCATGCTTCGACGCAAGAACATTCAGC CAACATGCCATCTGCGCTACATCTGTCTCAGAAGGAGGCTTCTTCTGGAGGTGTCCCTTC TGACATGCGATTCCTCAATGCAGATGACTTGGAATATTCTTCAGATGAGGATTGGGGCAA ACTCTCTTACAATCGCCTTGTATTTTCCACTGCTCCCTCGGAAGAGGAAGTTGAAGAGGC CACCAAAGAGCTACATGCTGCTCTTCATCTCTCCATTCCTGCCTCTAGTTCTGTGGAAAA AGAGAGCCCAACCATGCCTGTGGTGGAGAATGAGGAGAAAGAATTTGTTCCGGCCATTGT GAATCAAGAGAGGGCAACAGAGGAACAGCTTCCATCTTTGTCTGCTGGCCTGGGTCTGCT TGCTGCAGGAAGCAGCTCTGTTTATCAAGCATTTCATTTATTGCAGACTAACTCCNAGGT CCAGGATGCAGTCAAATCGCTTGCTCGTGATCCGGCNATCTGGAAAGCAGTTTTAAGCAA CGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5TGJ6 |
Definition |
sp|Q5TGJ6|HDGL1_HUMAN Hepatoma-derived growth factor-like protein 1 OS=Homo sapiens |
Align length |
59 |
Score (bit) |
35.0 |
E-value |
0.36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SL01 |
Definition |
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
197 |
Score (bit) |
59.7 |
E-value |
2.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951480|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_I10, 5' (664 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 60 2e-07 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 59 4e-07 tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 58 5e-07 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05 tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 53 1e-05 tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella paten... 53 2e-05 tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome... 47 0.001 tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 46 0.002 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 45 0.004 tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.004 tr|A7Q5B8|A7Q5B8_VITVI Chromosome undetermined scaffold_52, whol... 43 0.020 tr|Q01JC7|Q01JC7_ORYSA OSIGBa0122F23.3 protein OS=Oryza sativa G... 42 0.034 tr|A2XW72|A2XW72_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.034 tr|Q9FKH0|Q9FKH0_ARATH Genomic DNA, chromosome 5, TAC clone:K11J... 42 0.045 tr|Q7XU30|Q7XU30_ORYSJ Os04g0550700 protein OS=Oryza sativa subs... 42 0.045 tr|A5BI54|A5BI54_VITVI Putative uncharacterized protein OS=Vitis... 42 0.045 tr|A3AW63|A3AW63_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.045 tr|A7PKF7|A7PKF7_VITVI Chromosome chr15 scaffold_19, whole genom... 41 0.058 tr|A9NUF8|A9NUF8_PICSI Putative uncharacterized protein OS=Picea... 41 0.076 tr|A9TGP9|A9TGP9_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.22 tr|A9PAV8|A9PAV8_POPTR Putative uncharacterized protein OS=Popul... 39 0.38 tr|B6TL94|B6TL94_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.84 tr|B4G1S6|B4G1S6_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.84 tr|B4FQT4|B4FQT4_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.84 tr|B4FKH1|B4FKH1_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.1 tr|Q6BTR4|Q6BTR4_DEBHA DEHA2C16500p OS=Debaryomyces hansenii GN=... 37 1.1 tr|Q949B5|Q949B5_ORYSA Putative uncharacterized protein W1110ERI... 37 1.4 tr|Q6H689|Q6H689_ORYSJ Os02g0657700 protein OS=Oryza sativa subs... 37 1.4 tr|Q10QD3|Q10QD3_ORYSJ Os03g0201000 protein OS=Oryza sativa subs... 37 1.4 tr|B8AG50|B8AG50_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.4
>tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229919 PE=4 SV=1 Length = 375
Score = 59.7 bits (143), Expect = 2e-07 Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 26/197 (13%) Frame = +2
Query: 152 CHASTQEHSANMPSALHLS---QKEASSGGVPSDMRF---LNADDLEYSSDEDWGKLSYN 313 C T S P++ ++ E S G +D F L+ +D E++ DED+ Sbjct: 23 CRMCTTTPSLKAPTSARITCDCPSEVHSPGSTTDSGFKQYLDIEDWEFAGDEDY------ 76
Query: 314 RLVFSTAPSEEEVEEATKELHAALHLSI---------------PASSSVEKESPTM--PV 442 LVF T P++ EVEEAT +L AL + + SS EK+ P Sbjct: 77 -LVFGTLPTQGEVEEATSDLQHALQIGLFTNRSSNPLESSLARAGSSGKEKDGAVSRDPK 135
Query: 443 VENEEKEF--VPAIVNQERATEEQLPXXXXXXXXXXXXXXX-VYQAFHLLQTNSXVQDAV 613 V+ E+ + V A+ + L + +AFH Q N +Q V Sbjct: 136 VDGEDAGYHVVDAVADDWLEPSVALASSSKGKEVAGSGGKSAMLEAFHQFQHNPQIQQMV 195
Query: 614 KSLARDPAIWKAVLSNE 664 SLA D +W AVL+N+ Sbjct: 196 VSLATDKGVWDAVLAND 212
>tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17 (AT5g54540/MRB17_4) OS=Arabidopsis thaliana GN=At5g54540 PE=2 SV=1 Length = 297
Score = 58.5 bits (140), Expect = 4e-07 Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 3/172 (1%) Frame = +2
Query: 158 ASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP 337 AS++ SA++ SA+H S +E G + M+ DD E++ +E R+VFS P Sbjct: 44 ASSKPVSASITSAVHPSVEE--DGMI---MQRPVWDDWEFAEEEP-----IPRVVFSKPP 93
Query: 338 SEEEVEEATKELHAALHL---SIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQ 508 S EE +EAT++L A++L S P SS+ + S V F + + RA E Sbjct: 94 SLEEAKEATEDLKEAINLVYMSSPKSSAAMEGSNDGGSVSKMLSGFQSS---ENRAVESA 150
Query: 509 LPXXXXXXXXXXXXXXXVYQAFHLLQTNSXVQDAVKSLARDPAIWKAVLSNE 664 +P QAF L N+ Q V S+A DP +W AV+ N+ Sbjct: 151 VPQV-------------ALQAFAFLSENTAAQTVVASIASDPKVWDAVMENK 189
>tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 58.2 bits (139), Expect = 5e-07 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 9/143 (6%) Frame = +2
Query: 263 DDLEYSSDEDWGKLSYN-----RLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKE 424 DD E++ DE+ + Y+ RL+F + P+++EV+E + AL I P S + + Sbjct: 75 DDWEFTGDEEGFQRHYDDDHHDRLIFGSVPTQKEVQEVVSDFQDALTQGIVPVSGNFNDK 134
Query: 425 ---SPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNS 595 S + V + + +VN ++ E V +AF+LLQ+N Sbjct: 135 TTLSSSSSVYKKSGNKSCGTLVNLDQMERES--HEDNYRIVQKAGHNNVCEAFNLLQSNP 192
Query: 596 XVQDAVKSLARDPAIWKAVLSNE 664 VQ+ V SLA D +W+A+L NE Sbjct: 193 AVQEMVISLASDKTVWEALLKNE 215
>tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 53.1 bits (126), Expect = 1e-05 Identities = 44/117 (37%), Positives = 57/117 (48%) Frame = +2
Query: 314 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 493 RLVF+ PS EE EEAT EL A+ + S VE VV+ + KEF + Sbjct: 101 RLVFAP-PSREEAEEATTELRDAIGRAYFNESPVE-------VVKEQNKEF------NKL 146
Query: 494 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSXVQDAVKSLARDPAIWKAVLSNE 664 AT+ +P V QAF LL++++ Q V SLA D +W AVL NE Sbjct: 147 ATDAIIPSMPGH----------VVQAFTLLKSSTEAQSVVASLASDRNVWDAVLKNE 193
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 53.1 bits (126), Expect = 1e-05 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 11/142 (7%) Frame = +2
Query: 272 EYSSDEDWGKLSY-NRLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKESPTMPVV 445 E ++++++G + +R+VF AP++EEVEEA +L +L SI S S ES ++P Sbjct: 86 EETNNDNFGHHPFRDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTA 145
Query: 446 ENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQ---------AFHLLQTNSX 598 + + + +E V Q AF LLQ N Sbjct: 146 VQKNGGSIEVSQCSDSESESSKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHT 205
Query: 599 VQDAVKSLARDPAIWKAVLSNE 664 V++ V SL D AIW A+L NE Sbjct: 206 VREMVISLVSDKAIWDALLKNE 227
>tr|A9SDT8|A9SDT8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164415 PE=4 SV=1 Length = 352
Score = 52.8 bits (125), Expect = 2e-05 Identities = 57/215 (26%), Positives = 83/215 (38%), Gaps = 43/215 (20%) Frame = +2
Query: 149 FCHASTQEHSANMPSALHLSQKEASSGGVPSD--MRFLNADDLEYSSDEDW---GKLSYN 313 +CH + +++ P + S K + GG+ + + ++ ++ EDW G + Sbjct: 29 YCHCAPPPNAS--PRSRGASCKCKAVGGIHAHPGLSAVSYGPRQFWDGEDWEIAGDEERD 86
Query: 314 RLVFSTAPSEEEVEEATKELHAALHLSI-------------PASSSVEK----------- 421 VF + P+ EEVEEA+ +L AL L P SSS Sbjct: 87 HYVFGSLPTVEEVEEASSDLQNALRLGFFTPPPPKSEALPKPESSSSRSHPQSPRSSLGP 146
Query: 422 ------ESPTMPVVENEEKEF--------VPAIVNQERATEEQLPXXXXXXXXXXXXXXX 559 E T+ V E+E V +V + E L Sbjct: 147 VLVEATEMSTVTTVGEVEEEVTSNLSPLPVEPLVESKECIESPLYEVATSPKHSGAPSSA 206
Query: 560 VYQAFHLLQTNSXVQDAVKSLARDPAIWKAVLSNE 664 + +AF+ Q N VQ V SLA D AIW AVLSNE Sbjct: 207 MLEAFYQFQHNPQVQGMVVSLATDKAIWDAVLSNE 241
>tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027469001 PE=4 SV=1 Length = 209
Score = 46.6 bits (109), Expect = 0.001 Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 7/169 (4%) Frame = +2
Query: 179 ANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYN----RLVFSTAPSEE 346 A +P + +S + V DD E++S E+ + R+VF P+ + Sbjct: 8 ATVPVSSVISSAKLGDAPVSVQRPSWELDDWEFASVEEEINIGTGEPLPRVVFGGVPTLQ 67
Query: 347 EVEEATKELHAAL-HLSIPASSSVEKESPTMPVVE--NEEKEFVPAIVNQERATEEQLPX 517 E +EAT EL AL L + S S+ + +++ N + A V T +P Sbjct: 68 EAKEATSELKDALDQLYLSPSRSIRSGVQQLGLLQIANSDHLETKACVATTENTVATVPA 127
Query: 518 XXXXXXXXXXXXXXVYQAFHLLQTNSXVQDAVKSLARDPAIWKAVLSNE 664 QAF L+ + Q+ V S+A DP +W AV+ NE Sbjct: 128 H-------------AIQAFAYLKDSPAAQNVVASIASDPNVWSAVMQNE 163
>tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g10390 PE=4 SV=1 Length = 288
Score = 45.8 bits (107), Expect = 0.002 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%) Frame = +2
Query: 275 YSSDEDWGKLSYNRLVFSTAPSEEEVEEATKELHAALHLSIPAS----SSVEKESPTMPV 442 Y++ +DW + +R VF P+ EE AT +L + + A S + + PT + Sbjct: 52 YAAIDDW--VIPDREVFGPVPTHEEAMAATLDLKESFQFAKSAQLEPLPSGDLDVPTKGL 109
Query: 443 VENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSXVQDAVKSL 622 V +E + + E ++ V QAF +LQ + Q+ V SL Sbjct: 110 VHSESSQGLIHSKTSEHEDNHEISLVSSGAPGR------VVQAFTMLQDSPEAQEVVASL 163
Query: 623 ARDPAIWKAVLSNE 664 A D +W AV+ NE Sbjct: 164 ASDQNVWNAVMRNE 177
>tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subsp. japonica GN=P0455A11.10 PE=4 SV=1 Length = 300
Score = 45.1 bits (105), Expect = 0.004 Identities = 38/117 (32%), Positives = 54/117 (46%) Frame = +2
Query: 314 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 493 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 104 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 149
Query: 494 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSXVQDAVKSLARDPAIWKAVLSNE 664 + +P V QAF LL+++ Q V SLA D +W AVL NE Sbjct: 150 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNE 196
>tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28043 PE=4 SV=1 Length = 240
Score = 45.1 bits (105), Expect = 0.004 Identities = 38/117 (32%), Positives = 54/117 (46%) Frame = +2
Query: 314 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 493 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 44 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 89
Query: 494 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSXVQDAVKSLARDPAIWKAVLSNE 664 + +P V QAF LL+++ Q V SLA D +W AVL NE Sbjct: 90 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVWDAVLKNE 136
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