DK951488 |
Clone id |
TST38A01NGRL0011_I18 |
Library |
TST38 |
Length |
704 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_I18. 5' end sequence. |
Accession |
DK951488 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL20Contig1 |
Sequence |
GTTAGCCCCAAGCTTCCATGGCTTCCTCCGTTGCCTCCCCCGCTGTTGCATCGCTTCAAG CTGTCCAGGGCTTAGGACCGTCCCCTTGCACTGGGCAGGCAGTGCCTGCGTCGGCATTCC TTGGAGCTGGATTGAAGAAGTCCAACATCTCCATCACACCGGCAACTAGCTCTGCAAAGC CATTGGTGGTGCACGCTTCGGAGGATGAGTCGAAGCAGACCAAGAAGGATAAATGGGCAG GACTTGCATACGACACTTCCGATGATCAGCAAGACATTACAAGAGGGAAAGGGATGGTGG ATGCCCTCTTCCAAGGGGCAGTTGGCTTGGGTACCCAGCATGCTGTCATGAGTTCCTACG AGTACATCAGCACTGGTCAGAGGACTTTCCAGATGGACAACATGAAGGATGGGTACTACA TCGCACCGGCTTTCATGGACAAGTTGGTGGTGCACATTGCCAAGAACTTTATGAACCTTC CCAATATTAAGATTCCTTTGATTCTTGGTATTTGGGGTGGAAAAGGACAAGGAAAATCTT TCCAGTGTGAACTAGTGTTCTCAAAGCTTGGAATCAACCCCATCATGATGAGTGCTGGTG AGCTCGAGAGTGGAAATGCTGGTGAACCCGCCAAGCTCATTCGACAGAGATACCGTGAAG CTGCGGATGTGATTCGAAAGAAAGGAAAGATGTGTTGTCTCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40281 |
Definition |
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica |
Align length |
202 |
Score (bit) |
300.0 |
E-value |
5.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951488|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_I18, 5' (704 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 300 5e-81 sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 297 3e-80 sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 297 3e-80 sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 296 7e-80 sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 292 1e-78 sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 287 3e-77 sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 286 1e-76 sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 285 2e-76 sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 285 2e-76 sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 281 2e-75 sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 281 3e-75 sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 279 9e-75 sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 276 8e-74 sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 273 7e-73 sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 270 4e-72 sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 219 1e-56 sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 137 7e-32 sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 136 1e-31 sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 107 5e-23 sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 51 5e-06 sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_... 34 0.67 sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ... 33 1.1 sp|Q4KM73|KCY_RAT UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 P... 33 1.1 sp|Q9DBP5|KCY_MOUSE UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1... 33 1.1 sp|P30085|KCY_HUMAN UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1... 33 1.1 sp|Q9JJG0|TACC2_MOUSE Transforming acidic coiled-coil-containing... 33 1.5 sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE... 33 1.5 sp|Q9Y6K8|KAD5_HUMAN Adenylate kinase isoenzyme 5 OS=Homo sapien... 33 1.5 sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing prote... 33 2.0 sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio... 32 2.6
>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1 Length = 437
Score = 300 bits (768), Expect = 5e-81 Identities = 150/202 (74%), Positives = 167/202 (82%) Frame = +3
Query: 99 AVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDI 278 +VP+S FLG+ LKK N T + S+ L + AS DE KQT KD+W GLA+DTSDDQQDI Sbjct: 26 SVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDI 85
Query: 279 TRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHI 458 TRGKG VD+LFQ G GT A+MSSYEYISTG R + DN DGYYIAPAFMDKLVVHI Sbjct: 86 TRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHI 145
Query: 459 AKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAKL 638 KNFM LPN+K+PLILGIWGGKGQGKSFQCELVF+K+ I+PIMMSAGELESGNAGEPAKL Sbjct: 146 TKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKL 205
Query: 639 IRQRYREAADVIRKKGKMCCLF 704 IRQRYREAAD+IR KGKMC LF Sbjct: 206 IRQRYREAADIIR-KGKMCALF 226
>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1 Length = 435
Score = 297 bits (761), Expect = 3e-80 Identities = 151/211 (71%), Positives = 167/211 (79%) Frame = +3
Query: 72 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 251 L S VP++AF G+ LKKS P SS +V E +QT KDKW GLAY Sbjct: 18 LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76
Query: 252 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 431 D SDDQQDITRGKGMVD LFQ + GT +AVMSSY+YIS G R + +DN DG+YIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136
Query: 432 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 611 FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196
Query: 612 GNAGEPAKLIRQRYREAADVIRKKGKMCCLF 704 GNAGEPAKLIRQRYREAAD+I KKGKMCCLF Sbjct: 197 GNAGEPAKLIRQRYREAADII-KKGKMCCLF 226
>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1 Length = 476
Score = 297 bits (761), Expect = 3e-80 Identities = 151/211 (71%), Positives = 167/211 (79%) Frame = +3
Query: 72 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 251 L S VP++AF G+ LKKS P SS +V E +QT KDKW GLAY Sbjct: 18 LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76
Query: 252 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 431 D SDDQQDITRGKGMVD LFQ + GT +AVMSSY+YIS G R + +DN DG+YIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136
Query: 432 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 611 FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196
Query: 612 GNAGEPAKLIRQRYREAADVIRKKGKMCCLF 704 GNAGEPAKLIRQRYREAAD+I KKGKMCCLF Sbjct: 197 GNAGEPAKLIRQRYREAADII-KKGKMCCLF 226
>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1 Length = 413
Score = 296 bits (758), Expect = 7e-80 Identities = 148/204 (72%), Positives = 167/204 (81%) Frame = +3
Query: 93 GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 272 G VP SAFLG+ LK S+ T + +V A +DE KQT+KDKW GLA+DTSDDQQ Sbjct: 22 GGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIV-AEQDEEKQTEKDKWRGLAFDTSDDQQ 80
Query: 273 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 452 DITRGKG+ D LFQ +G GT +AV+SSYEYIS G R + DN DG+YIAPAFMDKL V Sbjct: 81 DITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTV 140
Query: 453 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA 632 HI KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEPA Sbjct: 141 HIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPA 200
Query: 633 KLIRQRYREAADVIRKKGKMCCLF 704 KLIRQRYREAAD+I KKGKMCCLF Sbjct: 201 KLIRQRYREAADII-KKGKMCCLF 223
>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2 Length = 439
Score = 292 bits (747), Expect = 1e-78 Identities = 149/208 (71%), Positives = 166/208 (79%), Gaps = 4/208 (1%) Frame = +3
Query: 93 GQAVPASAFLGAGLKKSNISITP----ATSSAKPLVVHASEDESKQTKKDKWAGLAYDTS 260 G + P SAF G LKK+ S P S K + +ES+QT KD+W GLAYD S Sbjct: 24 GASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDIS 83
Query: 261 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 440 DDQQDITRGKGMVD LFQ + GT +AVMSSYEY+STG R Q+DN+KDG+YIAPAF+D Sbjct: 84 DDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLD 141
Query: 441 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 620 KLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA Sbjct: 142 KLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 201
Query: 621 GEPAKLIRQRYREAADVIRKKGKMCCLF 704 GEPAKLIRQRYREAAD+I KGKMC LF Sbjct: 202 GEPAKLIRQRYREAADLI-AKGKMCALF 228
>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2 Length = 474
Score = 287 bits (735), Expect = 3e-77 Identities = 145/203 (71%), Positives = 165/203 (81%), Gaps = 1/203 (0%) Frame = +3
Query: 99 AVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQD 275 + PAS FLG + S + + S+ V+ ED KQT D+W GLAYDTSDDQQD Sbjct: 27 SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKED--KQTDGDRWRGLAYDTSDDQQD 84
Query: 276 ITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVH 455 ITRGKGMVD++FQ +G GT HAV+SSYEY+S G R + +DNM DG+YIAPAFMDKLVVH Sbjct: 85 ITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVH 144
Query: 456 IAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPAK 635 I KNF+ LPNIK+PLILGIWGGKGQGKSFQCELV +K+GINPIMMSAGELESGNAGEPAK Sbjct: 145 ITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAK 204
Query: 636 LIRQRYREAADVIRKKGKMCCLF 704 LIRQRYREAAD+I KKGKMCCLF Sbjct: 205 LIRQRYREAADLI-KKGKMCCLF 226
>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2 Length = 466
Score = 286 bits (731), Expect = 1e-76 Identities = 149/207 (71%), Positives = 165/207 (79%), Gaps = 7/207 (3%) Frame = +3
Query: 105 PASA---FLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSD 263 PAS FLG LKK S ++ +S+ V A E DE KQT +D+W GLAYD SD Sbjct: 12 PASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISD 71
Query: 264 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 443 DQQDITRGKG VD+LFQ G GT AV+SSYEY+S G RT+ DN G+YIAPAFMDK Sbjct: 72 DQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDK 131
Query: 444 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 623 LVVHI+KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG Sbjct: 132 LVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 191
Query: 624 EPAKLIRQRYREAADVIRKKGKMCCLF 704 EPAKLIRQRYREAAD+I KKGKMCCLF Sbjct: 192 EPAKLIRQRYREAADII-KKGKMCCLF 217
>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1 Length = 441
Score = 285 bits (729), Expect = 2e-76 Identities = 142/208 (68%), Positives = 171/208 (82%), Gaps = 4/208 (1%) Frame = +3
Query: 93 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 260 G + P+SAF G LKK S + + TS + +V E +E++QT+ D+W GLAYD S Sbjct: 24 GASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVS 83
Query: 261 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 440 DDQQDITRGKG+VD+LFQ + GT +AV+SS++Y+S G R + DN+KDG+YIAPAF+D Sbjct: 84 DDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLD 143
Query: 441 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 620 KLVVHIAKNFM LPNIK+PLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA Sbjct: 144 KLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 203
Query: 621 GEPAKLIRQRYREAADVIRKKGKMCCLF 704 GEPAKLIRQRYREA+D+I KKGKMC LF Sbjct: 204 GEPAKLIRQRYREASDLI-KKGKMCVLF 230
>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 442
Score = 285 bits (728), Expect = 2e-76 Identities = 142/208 (68%), Positives = 162/208 (77%), Gaps = 4/208 (1%) Frame = +3
Query: 93 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 260 G +VP++AF G LKK +S T+ + +V + D KQT D+W GL D S Sbjct: 24 GTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFS 83
Query: 261 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 440 DDQQDITRGKGMVD+LFQ G GT HAV+ SYEY+S G R + +DN DG+YIAPAFMD Sbjct: 84 DDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMD 143
Query: 441 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 620 KLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF K+GINPIMMSAGELESGNA Sbjct: 144 KLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNA 203
Query: 621 GEPAKLIRQRYREAADVIRKKGKMCCLF 704 GEPAKLIRQRYREAA++IR KG MCCLF Sbjct: 204 GEPAKLIRQRYREAAEIIR-KGNMCCLF 230
>sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1 Length = 464
Score = 281 bits (719), Expect = 2e-75 Identities = 145/206 (70%), Positives = 163/206 (79%), Gaps = 6/206 (2%) Frame = +3
Query: 105 PASA---FLGAGLKK---SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDD 266 PAS FLG LKK S ++ +S A V A+E+ ++ DKW GLAYD SDD Sbjct: 12 PASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDD 71
Query: 267 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 446 QQDITRGKG+VD+LFQ G GT AV+SSYEY+S G R + DN G+YIAPAFMDKL Sbjct: 72 QQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 131
Query: 447 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 626 VVH++KNFM LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGE Sbjct: 132 VVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 191
Query: 627 PAKLIRQRYREAADVIRKKGKMCCLF 704 PAKLIRQRYREAAD+I KKGKMCCLF Sbjct: 192 PAKLIRQRYREAADMI-KKGKMCCLF 216
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PIQ8 |
Definition |
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
204 |
Score (bit) |
310.0 |
E-value |
4.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951488|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0011_I18, 5' (704 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 310 4e-83 tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 310 8e-83 tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 308 3e-82 tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 308 3e-82 tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 304 4e-81 tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 304 4e-81 tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 303 9e-81 tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 302 1e-80 tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 301 2e-80 tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 301 2e-80 tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 299 1e-79 tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 298 2e-79 tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 297 4e-79 tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 297 4e-79 tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=... 297 5e-79 tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 294 3e-78 tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 293 6e-78 tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 293 7e-78 tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea... 293 7e-78 tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea... 293 7e-78 tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea... 293 7e-78 tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten... 293 1e-77 tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 290 5e-77 tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 290 8e-77 tr|Q9ATC0|Q9ATC0_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 289 1e-76 tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 287 4e-76 tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 287 4e-76 tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 287 5e-76 tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ... 286 7e-76 tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 286 1e-75
>tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018440001 PE=4 SV=1 Length = 438
Score = 310 bits (795), Expect = 4e-83 Identities = 154/204 (75%), Positives = 171/204 (83%) Frame = +3
Query: 93 GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 272 G +VP+SAFLG+ LKK N T + S+ V A D+ QT+KDKW GLA+DTSDDQQ Sbjct: 25 GASVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGLAFDTSDDQQ 84
Query: 273 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 452 DI RGKGMVD+LFQ + GT +AVMSSYEYISTG R + +DN DG+YIAPAFMDKLVV Sbjct: 85 DIVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLVV 144
Query: 453 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEPA 632 HI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEPA Sbjct: 145 HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEPA 204
Query: 633 KLIRQRYREAADVIRKKGKMCCLF 704 KLIRQRYREAAD+IR KGKMCCLF Sbjct: 205 KLIRQRYREAADIIR-KGKMCCLF 227
>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001 PE=4 SV=1 Length = 474
Score = 310 bits (793), Expect = 8e-83 Identities = 154/205 (75%), Positives = 171/205 (83%) Frame = +3
Query: 90 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 269 TG +VP+SAFLG LKK + I +S+ V A DE KQT KDKW GLA+D SDDQ Sbjct: 23 TGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQ 82
Query: 270 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 449 QDITRGKGMVD+LFQ + GT +AVMSSY+YISTG R + +DN DG+YIAPAFMDKLV Sbjct: 83 QDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLV 142
Query: 450 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 629 VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEP Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 202
Query: 630 AKLIRQRYREAADVIRKKGKMCCLF 704 AKLIRQRYREAAD+IR KGKMCCLF Sbjct: 203 AKLIRQRYREAADIIR-KGKMCCLF 226
>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001 PE=4 SV=1 Length = 472
Score = 308 bits (788), Expect = 3e-82 Identities = 152/205 (74%), Positives = 172/205 (83%) Frame = +3
Query: 90 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 269 TG +VP+SAF G+ LKK + T ++ V A DE++QT+KD+W GLAYD SDDQ Sbjct: 23 TGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82
Query: 270 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 449 QDITRGKGMVD+LFQ + GT +AVMSSYEY+STG R + +DN DG+YIAPAFMDKLV Sbjct: 83 QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142
Query: 450 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 629 VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEP Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEP 202
Query: 630 AKLIRQRYREAADVIRKKGKMCCLF 704 AKLIRQRYREAAD+IR KGKMCCLF Sbjct: 203 AKLIRQRYREAADIIR-KGKMCCLF 226
>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039112 PE=4 SV=1 Length = 472
Score = 308 bits (788), Expect = 3e-82 Identities = 152/205 (74%), Positives = 172/205 (83%) Frame = +3
Query: 90 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 269 TG +VP+SAF G+ LKK + T ++ V A DE++QT+KD+W GLAYD SDDQ Sbjct: 23 TGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82
Query: 270 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 449 QDITRGKGMVD+LFQ + GT +AVMSSYEY+STG R + +DN DG+YIAPAFMDKLV Sbjct: 83 QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142
Query: 450 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 629 VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCELVFSK+GINPIMMSAGELESGNAGEP Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMGINPIMMSAGELESGNAGEP 202
Query: 630 AKLIRQRYREAADVIRKKGKMCCLF 704 AKLIRQRYREAAD+IR KGKMCCLF Sbjct: 203 AKLIRQRYREAADIIR-KGKMCCLF 226
>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 461
Score = 304 bits (778), Expect = 4e-81 Identities = 150/206 (72%), Positives = 168/206 (81%), Gaps = 2/206 (0%) Frame = +3
Query: 93 GQAVPASAFLGAGLKKSNIS--ITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDD 266 G VP SAF G LKK + S SS VV DE KQT+KD+W GL D SDD Sbjct: 24 GSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDD 83
Query: 267 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 446 QQDITRGKGMVD+LFQ G GT + V+SSYEY+S G RT+ +DNM DGYYIAPAFMDK+ Sbjct: 84 QQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDKI 143
Query: 447 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 626 VVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGE Sbjct: 144 VVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGE 203
Query: 627 PAKLIRQRYREAADVIRKKGKMCCLF 704 PAKLIRQRYREAAD+I+KKGKMCCLF Sbjct: 204 PAKLIRQRYREAADIIKKKGKMCCLF 229
>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 476
Score = 304 bits (778), Expect = 4e-81 Identities = 150/205 (73%), Positives = 168/205 (81%), Gaps = 1/205 (0%) Frame = +3
Query: 93 GQAVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 269 G VP SAF G LKK S+ T + S+ V A DE KQT KD+W GL D SDDQ Sbjct: 24 GSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQ 83
Query: 270 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 449 QDITRGKGMVD+LFQ G GT + ++SSYEY+S G RT+ +DN DGYYIAPAFMDKLV Sbjct: 84 QDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLV 143
Query: 450 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 629 VHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEP Sbjct: 144 VHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 203
Query: 630 AKLIRQRYREAADVIRKKGKMCCLF 704 AKLIRQRYREAAD+I+KKGKMCCLF Sbjct: 204 AKLIRQRYREAADIIKKKGKMCCLF 228
>tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedeschia aethiopica GN=rca4 PE=2 SV=1 Length = 435
Score = 303 bits (775), Expect = 9e-81 Identities = 155/206 (75%), Positives = 172/206 (83%), Gaps = 1/206 (0%) Frame = +3
Query: 90 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSDD 266 +G +V S FLG LK N S+ +S L V A++ DESKQTK D+WAGL DTSDD Sbjct: 20 SGASVTRSGFLGTSLKTVNPSLGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYTDTSDD 79
Query: 267 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 446 QQDITRGKGMVD+LFQ +G GT + V+SSYEYISTG R+F +DN +G YIAPAFMDKL Sbjct: 80 QQDITRGKGMVDSLFQAPMGDGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKL 139
Query: 447 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 626 VVHI KNFMNLPNIKIPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGE Sbjct: 140 VVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE 199
Query: 627 PAKLIRQRYREAADVIRKKGKMCCLF 704 PAKLIRQRYREAAD+IR KGKMCCLF Sbjct: 200 PAKLIRQRYREAADIIR-KGKMCCLF 224
>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 475
Score = 302 bits (774), Expect = 1e-80 Identities = 149/206 (72%), Positives = 168/206 (81%), Gaps = 2/206 (0%) Frame = +3
Query: 93 GQAVPASAFLGAGLKKSNIS--ITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDD 266 G VP SAF G LKK + S SS VV DE KQT+KD+W GL D SDD Sbjct: 24 GSTVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVTDMSDD 83
Query: 267 QQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKL 446 QQDITRGKGMVD+LFQ G GT + V+SSYEY+S G RT+ +DNM DG+YIAPAFMDK+ Sbjct: 84 QQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDKI 143
Query: 447 VVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGE 626 VVHI+KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GI+PIMMSAGELESGNAGE Sbjct: 144 VVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGE 203
Query: 627 PAKLIRQRYREAADVIRKKGKMCCLF 704 PAKLIRQRYREAAD+I+KKGKMCCLF Sbjct: 204 PAKLIRQRYREAADIIKKKGKMCCLF 229
>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase small protein isoform OS=Acer rubrum PE=2 SV=1 Length = 437
Score = 301 bits (772), Expect = 2e-80 Identities = 154/211 (72%), Positives = 169/211 (80%) Frame = +3
Query: 72 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 251 L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 252 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 431 DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAPA Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136
Query: 432 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 611 FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELES Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196
Query: 612 GNAGEPAKLIRQRYREAADVIRKKGKMCCLF 704 GNAGEPAKLIRQRYREAAD+I KKGKMCCLF Sbjct: 197 GNAGEPAKLIRQRYREAADII-KKGKMCCLF 226
>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase large protein isoform OS=Acer rubrum PE=2 SV=1 Length = 474
Score = 301 bits (772), Expect = 2e-80 Identities = 154/211 (72%), Positives = 169/211 (80%) Frame = +3
Query: 72 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 251 L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 252 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 431 DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAPA Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136
Query: 432 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 611 FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCELVF+K+GI PIMMSAGELES Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELES 196
Query: 612 GNAGEPAKLIRQRYREAADVIRKKGKMCCLF 704 GNAGEPAKLIRQRYREAAD+I KKGKMCCLF Sbjct: 197 GNAGEPAKLIRQRYREAADII-KKGKMCCLF 226
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