DK951543
Clone id TST38A01NGRL0011_L01
Library
Length 667
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_L01. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
AAGTGAACACATAATCAAGAAAGGTAAGCAGGAAGGAAGCCGCAGTCATGGCAGCAACAA
CTGCCTCCCTCTCCTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGAGCTCT
CTCGCAAGGTGGGAGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTCCTCAT
CTGGCAGCATCTGGTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGGCTCTC
CCCCATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGGTCTGT
CCGCAGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAGATGGG
CCATGTTGGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAAGAACGGTGTCAAGT
TTGGTGAGGCTGTGTGGTTCAAGGCTGGCTCCCAGATCTTCGCCGATGGCGGCCTTGATT
ATCTTGGCAACCCGAGCCTTGTCCACGCTCAAAGCATTTTGGCCATTTGGGCCTGCCAGG
TCATCCTTATGGGCGCTGTTGAGGGGTACCGTGTTGCAGGTGGTCCCCTTGGTGAGGTTG
AGGACCCCATCTACCCCGGTGGCTCCTTCGACCCCCTCGGCTTGGCTGACGACCCAGAGG
CTTTCGC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 207
Score (bit) 399.0
E-value 1.0e-111
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951543|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_L01, 5'
(667 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 399 e-111
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 336 6e-92
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 335 2e-91
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 334 3e-91
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 333 4e-91
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 333 5e-91
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 333 6e-91
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 332 8e-91
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 332 1e-90
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 332 1e-90
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 331 2e-90
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 331 2e-90
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 330 3e-90
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 330 5e-90
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 329 7e-90
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 329 7e-90
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 328 1e-89
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 328 1e-89
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro... 328 2e-89
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 328 2e-89
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 328 2e-89
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 326 6e-89
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 326 8e-89
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 325 1e-88
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 325 1e-88
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 325 1e-88
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 325 1e-88
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 324 2e-88
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 324 2e-88
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop... 324 3e-88

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
SV=1
Length = 265

Score = 399 bits (1025), Expect = e-111
Identities = 196/207 (94%), Positives = 203/207 (98%), Gaps = 1/207 (0%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 224
MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG
Sbjct: 1 MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59

Query: 225 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 404
PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA
Sbjct: 60 PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119

Query: 405 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 584
KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179

Query: 585 PLGEVEDPIYPGGSFDPLGLADDPEAF 665
PLGEVEDPIYPGGSFDPLGLADDPEAF
Sbjct: 180 PLGEVEDPIYPGGSFDPLGLADDPEAF 206


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
OS=Physcomitrella patens PE=3 SV=1
Length = 269

Score = 336 bits (862), Expect = 6e-92
Identities = 165/209 (78%), Positives = 182/209 (87%), Gaps = 3/209 (1%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 218
MAA TA S+++ +KPVNELSRKV G EARV M S+GS IWYG+DRP +
Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60

Query: 219 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 398
LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 399 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 578
LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180

Query: 579 GGPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GGPLGEV DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPDTF 209



Score = 31.2 bits (69), Expect = 5.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3

Query: 231 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 410
+G P +T +D GL+ DP+TFA+ + E+ + R AM G ++
Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239

Query: 411 G 413
G
Sbjct: 240 G 240


>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9,
chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1
Length = 265

Score = 335 bits (858), Expect = 2e-91
Identities = 164/211 (77%), Positives = 181/211 (85%), Gaps = 5/211 (2%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 212
MA++T +LSS+ F+G+ + + L GEARV M A +SSGS WYG DR
Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55

Query: 213 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 392
LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P
Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115

Query: 393 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 572
ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR
Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR 175

Query: 573 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 665
VAGGPLGEV DP+YPGG+FDPLGLADDPEAF
Sbjct: 176 VAGGPLGEVVDPLYPGGTFDPLGLADDPEAF 206


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
Length = 267

Score = 334 bits (856), Expect = 3e-91
Identities = 163/208 (78%), Positives = 177/208 (85%), Gaps = 2/208 (0%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 221
MA +T +LSSS F+G+ +K S G G ++ A K +SSGS WYG DR YL
Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401
GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581
A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180

Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAF 208


>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1,
chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1
Length = 262

Score = 333 bits (855), Expect = 4e-91
Identities = 163/211 (77%), Positives = 181/211 (85%), Gaps = 5/211 (2%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGA-GEARVQMMA----PKKSSSGSIWYGSDRP 212
MAA+T ++SS+ +G +K VG+ GE R+ M PK ++SGS WYG DR
Sbjct: 1 MAASTMAISSTAMAGTPIK--------VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRV 52

Query: 213 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 392
YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P
Sbjct: 53 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 112

Query: 393 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 572
ELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR
Sbjct: 113 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 172

Query: 573 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 665
+AGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 173 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 203


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
(Fragment) OS=Silene pratensis PE=2 SV=2
Length = 205

Score = 333 bits (854), Expect = 5e-91
Identities = 162/203 (79%), Positives = 173/203 (85%), Gaps = 1/203 (0%)
Frame = +3

Query: 60 TASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSG 236
T+++ S F+GQ L KP NEL RKVG RV M KS+ SIWYG DRP YLGPFS
Sbjct: 3 TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 237 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGV 416
PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 417 KFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 596
KFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQSILAIWACQV+LMGAVEGYRV GGPLGE
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGE 182

Query: 597 VEDPIYPGGSFDPLGLADDPEAF 665
D +YPGG+FDPLGLA+DPEAF
Sbjct: 183 GLDQLYPGGAFDPLGLAEDPEAF 205


>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic
OS=Zea mays PE=2 SV=1
Length = 265

Score = 333 bits (853), Expect = 6e-91
Identities = 166/211 (78%), Positives = 180/211 (85%), Gaps = 5/211 (2%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 212
MA++T +LSS+ F+G K VN S G EARV M A ++SGS WYG DR
Sbjct: 1 MASSTMALSSTAFAG---KAVNVPSSSFG--EARVTMRKTAAKAKPAAASGSPWYGPDRV 55

Query: 213 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 392
LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV P
Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP 115

Query: 393 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 572
ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR
Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 175

Query: 573 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAF 665
+AGGPLGEV DP+YPGGSFDPLGLADDPEAF
Sbjct: 176 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAF 206


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
Length = 266

Score = 332 bits (852), Expect = 8e-91
Identities = 165/210 (78%), Positives = 177/210 (84%), Gaps = 4/210 (1%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 215
MAATT SLSSS F+G K V L G+ARV M K+ SS S WYGSDR L
Sbjct: 1 MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57

Query: 216 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 395
YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 58 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 396 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 575
LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGYR+
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRI 177

Query: 576 AGGPLGEVEDPIYPGGSFDPLGLADDPEAF 665
AGGPLGE+ DP+YPGGSFDPLGLA+ P+AF
Sbjct: 178 AGGPLGEIVDPLYPGGSFDPLGLAERPQAF 207


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
Length = 267

Score = 332 bits (850), Expect = 1e-90
Identities = 163/208 (78%), Positives = 176/208 (84%), Gaps = 2/208 (0%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 221
MAA T +LSSS F+G+ +K S G G+ ++ K SSGS WYG DR YL
Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401
GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581
A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GPLGEV DP+YPGGSFDPLGLA+DPEAF
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAF 208


>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40,
chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1
Length = 267

Score = 332 bits (850), Expect = 1e-90
Identities = 163/208 (78%), Positives = 177/208 (85%), Gaps = 2/208 (0%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 221
MAA+T +LSS F+G+ +K S G G+ ++ A K SSGS WYG DR YL
Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401
GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL
Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581
A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GPLGEV DP+YPGGSFDPLGLA+DPEAF
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAF 208


tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 206
Score (bit) 350.0
E-value 6.0e-95
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951543|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_L01, 5'
(667 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 350 6e-95
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 349 8e-95
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 347 5e-94
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 346 6e-94
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 346 8e-94
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 345 1e-93
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 345 1e-93
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 343 7e-93
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 343 7e-93
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 342 1e-92
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 341 2e-92
tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant... 340 4e-92
tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T... 340 6e-92
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 338 1e-91
tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote... 338 2e-91
tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 337 3e-91
tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind... 337 4e-91
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 337 4e-91
tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ... 336 7e-91
tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 335 2e-90
tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ... 335 2e-90
tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 334 3e-90
tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 333 4e-90
tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 333 4e-90
tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ... 333 4e-90
tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 333 4e-90
tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 333 4e-90
tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 333 4e-90
tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 333 6e-90
tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 333 6e-90

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
Length = 263

Score = 350 bits (897), Expect = 6e-95
Identities = 170/206 (82%), Positives = 182/206 (88%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227
MAA TA S+++ LKPVNELSRKVG EARV M K S S SIWYG+DRP +LGP
Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58

Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407
FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587
NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178

Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAF 665
LGEV DPIYPGGSFDPLGLADDP+ F
Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTF 204


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
Length = 265

Score = 349 bits (896), Expect = 8e-95
Identities = 167/206 (81%), Positives = 184/206 (89%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227
MAA TA S+++ LKPVNELSRKVG+ EARV M KS+S SIWYG+DRP YLGP
Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60

Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407
FSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 61 FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120

Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587
+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGP
Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGP 180

Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAF 665
LGE+ DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPDTF 206


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
protein 2 (Predicted protein) OS=Physcomitrella patens
subsp. patens GN=PpLhcb2 PE=4 SV=1
Length = 267

Score = 347 bits (889), Expect = 5e-94
Identities = 168/208 (80%), Positives = 183/208 (87%), Gaps = 2/208 (0%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 221
MAA TA S+++ LKPVNELSRKVG+ +ARV M S+GS IWYG+DRP YL
Sbjct: 1 MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401
GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581
AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180

Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GPLGEV DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTF 208


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
Length = 263

Score = 346 bits (888), Expect = 6e-94
Identities = 167/206 (81%), Positives = 183/206 (88%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227
MAA TA S+++ LKPVNELSR+VGA EARV M K + S SIWYG+DRP +LGP
Sbjct: 1 MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58

Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407
FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118

Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587
+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP
Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178

Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAF 665
LGEV DPIYPGGSFDPLGLADDP+ F
Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTF 204


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
Length = 265

Score = 346 bits (887), Expect = 8e-94
Identities = 167/206 (81%), Positives = 180/206 (87%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227
MAA TA S+++ LKPVNELSRKVG EAR+ M SS SIWYG+DRP YLGP
Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60

Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407
FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 61 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120

Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587
NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 180

Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAF 665
LG+V DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 LGDVTDPIYPGGSFDPLGLADDPDTF 206


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
OS=Physcomitrella patens PE=2 SV=1
Length = 268

Score = 345 bits (885), Expect = 1e-93
Identities = 167/209 (79%), Positives = 185/209 (88%), Gaps = 3/209 (1%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 218
MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP +
Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 219 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 398
LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 399 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 578
LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 579 GGPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GGPLG+V DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTF 209


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
Length = 268

Score = 345 bits (885), Expect = 1e-93
Identities = 167/209 (79%), Positives = 185/209 (88%), Gaps = 3/209 (1%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 218
MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP +
Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 219 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 398
LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 399 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 578
LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180

Query: 579 GGPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GGPLG+V DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTF 209


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
Length = 263

Score = 343 bits (879), Expect = 7e-93
Identities = 169/206 (82%), Positives = 182/206 (88%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 227
MAA TA+ S+++ LK +NELSRKVG +ARV M K SSS SIWYG+DRP YLGP
Sbjct: 1 MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58

Query: 228 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 407
SG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59 LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 408 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 587
NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP
Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 178

Query: 588 LGEVEDPIYPGGSFDPLGLADDPEAF 665
LGEV DPIYPGGSFDPLGLADDP+ F
Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTF 204


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
Length = 267

Score = 343 bits (879), Expect = 7e-93
Identities = 168/208 (80%), Positives = 183/208 (87%), Gaps = 2/208 (0%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 221
MAA TA S+++ LKPVNELSRKVG EARV M A K ++S SIWYG+DRP YL
Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401
GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581
AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAG 180

Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GPLG+V DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 GPLGDVTDPIYPGGSFDPLGLADDPDTF 208


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
Length = 267

Score = 342 bits (877), Expect = 1e-92
Identities = 166/208 (79%), Positives = 182/208 (87%), Gaps = 2/208 (0%)
Frame = +3

Query: 48 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 221
MA TA S+++ LKPVNELSRKVG EARV M K + S SIWYG+DRP +L
Sbjct: 1 MAGATAMHSTALAGQGVLKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFL 60

Query: 222 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 401
GPFSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELL
Sbjct: 61 GPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELL 120

Query: 402 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 581
AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 582 GPLGEVEDPIYPGGSFDPLGLADDPEAF 665
GPLGEV DPIYPGGSFDPLGLADDP+ F
Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTF 208