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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951563
Clone id TST38A01NGRL0011_L21
Library
Length 645
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_L21. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TTGACCGTCACCTGGCTTTCCTTCCTCTCACGTCTATTGGATGCTGCTAAGTATGCACTG
ACAATGCTCTTCTGTTCTATGATGTCGTCTTCTCTTCCGAGTAGTAATGTCTCCTCGCTC
GCCTCAAGCCTGCACCTGCAGAACCACAACCCTGTAGGAGCATCTTCATCGACATCAACA
GCAACAGTCTTGTCGCCTCCTCCTCCAGCACCTACCAGCATTCCTAGTCGGCAGCTGCGG
ACTCCTCATAGTGGATATCACTTTGATGGATCCAAGCGACGATTCTTTGAGGGCTGGTAT
TTCAAATTGACCCTTCCTGAAGAGAAGACAAGCTTTGCTTTTATTTATACAATCGAAGAC
CCTGCATTCAGTGGCAATTACGGCGAAACTGACAGGCGGGAGTATGGGCCAAGGTTCCCA
GGAGCAGGAGCACAAGTCATGGAAGGCAAAGATAGCTTTCTTTTCCAATACTCTCAGGAC
ACTAGTTCTTTCTGGGCAAGTAGGCATGAATTGGCTTTGGGAAACACATTTGTAGCTCGA
CCGGGGCAAACACCTCCAAGGGGGGAAGCCTCTAATGAGGTAAAGTTTTTGCTGTTTTGG
GCCTCTATAGGAAGAAGAGCTGATGCATTGGCAAACATGCTTCGG
■■Homology search results ■■ -
sp_hit_id Q94FY7
Definition sp|Q94FY7|TOCC_ARATH Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana
Align length 117
Score (bit) 147.0
E-value 6.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951563|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_L21, 5'
         (645 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q94FY7|TOCC_ARATH Tocopherol cyclase, chloroplastic OS=Arabid...   147   6e-35
sp|Q94FY8|TOCC_MAIZE Probable tocopherol cyclase, chloroplastic ...   144   4e-34
sp|Q12VH1|GATA_METBU Glutamyl-tRNA(Gln) amidotransferase subunit...    33   1.3  
sp|Q5DZ04|LUXD_VIBF1 Acyl transferase OS=Vibrio fischeri (strain...    30   8.3  

>sp|Q94FY7|TOCC_ARATH Tocopherol cyclase, chloroplastic
           OS=Arabidopsis thaliana GN=VTE1 PE=1 SV=1
          Length = 488

 Score =  147 bits (370), Expect = 6e-35
 Identities = 63/117 (53%), Positives = 83/117 (70%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R+LRTPHSGYHFDG+ R+FFEGWYF++++PE++ SF F+Y++E+PAF  +    +   YG
Sbjct: 73  RELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYG 132

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNE 579
           PRF G GAQ++   D +L QY QD+ +FW  RHEL LGNTF A PG   P  E   E
Sbjct: 133 PRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPE 189


>sp|Q94FY8|TOCC_MAIZE Probable tocopherol cyclase, chloroplastic
           OS=Zea mays GN=SDX1 PE=2 SV=1
          Length = 474

 Score =  144 bits (363), Expect = 4e-34
 Identities = 60/113 (53%), Positives = 83/113 (73%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R LRTPHSGYHFDG+ R FFEGWYFK+++PE + SF F+Y++E+P F     + D+  Y 
Sbjct: 62  RSLRTPHSGYHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLLYR 121

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGE 567
           PRF G GAQ++   D ++ Q+S+ +++FW SRHEL LGNTF++    TPP+GE
Sbjct: 122 PRFTGVGAQILGADDKYICQFSEKSNNFWGSRHELMLGNTFISNKESTPPQGE 174


>sp|Q12VH1|GATA_METBU Glutamyl-tRNA(Gln) amidotransferase subunit A
           OS=Methanococcoides burtonii (strain DSM 6242) GN=gatA
           PE=3 SV=1
          Length = 475

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = +1

Query: 304 KLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYGPRFPGAGAQVMEGK 450
           K+++P  K + A  YTI     S N    D   YGPR  G    VM  K
Sbjct: 285 KVSMPNTKYALAAYYTIAMSEASSNLARFDGTRYGPRNDGENWHVMASK 333


>sp|Q5DZ04|LUXD_VIBF1 Acyl transferase OS=Vibrio fischeri (strain
           ATCC 700601 / ES114) GN=luxD PE=3 SV=1
          Length = 307

 Score = 30.4 bits (67), Expect = 8.3
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 475 QDTSSFWASRHELALGNTFVARPGQTPPRGEASNEVKFLLFWASIGRRADALANM 639
           +D SSF+   H + L N    R  +TPP+ +   +   ++  A   RR D  A +
Sbjct: 2   KDESSFFTIDHIIELENGQSIRVWETPPKSDTHKKNSTIVIAAGFARRMDHFAGL 56
tr_hit_id A7P598
Definition tr|A7P598|A7P598_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera
Align length 117
Score (bit) 150.0
E-value 8.0e-35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951563|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_L21, 5'
         (645 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P598|A7P598_VITVI Chromosome chr4 scaffold_6, whole genome ...   150   8e-35
tr|Q6E6T1|Q6E6T1_SOLTU Tocopherol cyclase OS=Solanum tuberosum G...   147   5e-34
tr|B7X941|B7X941_HEVBR Tocopherol cyclase OS=Hevea brasiliensis ...   147   5e-34
tr|Q0WW11|Q0WW11_ARATH Sucrose export defective 1 OS=Arabidopsis...   147   7e-34
tr|Q2XV81|Q2XV81_HELAN Tocopherol cyclase OS=Helianthus annuus G...   144   4e-33
tr|Q2XV80|Q2XV80_HELAN Tocopherol cyclase OS=Helianthus annuus G...   144   4e-33
tr|B2ZSX9|B2ZSX9_PHAVU Tocopherol cyclase OS=Phaseolus vulgaris ...   143   8e-33
tr|Q1PBH4|Q1PBH4_GOSHI Tocopherol cyclase OS=Gossypium hirsutum ...   142   1e-32
tr|Q1PBH3|Q1PBH3_WHEAT Tocopherol cyclase OS=Triticum aestivum G...   142   1e-32
tr|Q7XAF0|Q7XAF0_EUCGU Tocopherol cyclase OS=Eucalyptus gunnii G...   142   2e-32
tr|Q6K7V6|Q6K7V6_ORYSJ Os02g0276500 protein OS=Oryza sativa subs...   142   2e-32
tr|B8AFL1|B8AFL1_ORYSI Putative uncharacterized protein OS=Oryza...   142   2e-32
tr|B2KSJ0|B2KSJ0_SESIN Chloroplast tocopherol cyclase OS=Sesamum...   141   3e-32
tr|A9SWQ5|A9SWQ5_PHYPA Predicted protein OS=Physcomitrella paten...   136   1e-30
tr|A3A5I4|A3A5I4_ORYSJ Putative uncharacterized protein OS=Oryza...   127   6e-28
tr|Q114L4|Q114L4_TRIEI Tocopherol cyclase OS=Trichodesmium eryth...    99   2e-19
tr|A8HPF7|A8HPF7_CHLRE Tocopherol cyclase (Fragment) OS=Chlamydo...    97   6e-19
tr|Q8Z056|Q8Z056_ANASP All0245 protein OS=Anabaena sp. (strain P...    94   7e-18
tr|B8HJJ8|B8HJJ8_9CHRO Tocopherol cyclase OS=Cyanothece sp. PCC ...    93   2e-17
tr|B1X1K7|B1X1K7_CYAA5 Putative uncharacterized protein OS=Cyano...    92   2e-17
tr|Q3M9I8|Q3M9I8_ANAVT Tocopherol cyclase OS=Anabaena variabilis...    92   3e-17
tr|B7K7Y9|B7K7Y9_9CHRO Putative uncharacterized protein OS=Cyano...    92   4e-17
tr|B5W9G5|B5W9G5_SPIMA Putative uncharacterized protein OS=Arthr...    92   4e-17
tr|B2J3L9|B2J3L9_NOSP7 Putative uncharacterized protein OS=Nosto...    91   6e-17
tr|Q4CAF9|Q4CAF9_CROWT Putative uncharacterized protein OS=Croco...    91   8e-17
tr|A3IMZ1|A3IMZ1_9CHRO Putative uncharacterized protein OS=Cyano...    89   2e-16
tr|A0YKU8|A0YKU8_9CYAN Putative uncharacterized protein OS=Lyngb...    89   2e-16
tr|B4VH68|B4VH68_9CYAN Putative uncharacterized protein OS=Micro...    89   2e-16
tr|A0ZJ07|A0ZJ07_NODSP Putative uncharacterized protein OS=Nodul...    86   2e-15
tr|B0C447|B0C447_ACAM1 Tocopherol cyclase, putative OS=Acaryochl...    84   6e-15

>tr|A7P598|A7P598_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032449001
           PE=4 SV=1
          Length = 502

 Score =  150 bits (378), Expect = 8e-35
 Identities = 63/117 (53%), Positives = 86/117 (73%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R+LRTPHSGYHFDGS R+FFEGWYFK+++PE+K SF F+Y++E+PAF    G  +  +YG
Sbjct: 88  RELRTPHSGYHFDGSPRQFFEGWYFKVSIPEQKQSFCFMYSVENPAFQKKLGTFEELQYG 147

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNE 579
           PRF G GAQ++   D ++ Q+S+++++FW  RHEL LG+TFV R    PP  E   E
Sbjct: 148 PRFTGVGAQILGADDKYICQFSEESTNFWGCRHELMLGHTFVGRKDLRPPNKEVPPE 204


>tr|Q6E6T1|Q6E6T1_SOLTU Tocopherol cyclase OS=Solanum tuberosum
           GN=SXD1 PE=2 SV=1
          Length = 501

 Score =  147 bits (371), Expect = 5e-34
 Identities = 62/113 (54%), Positives = 84/113 (74%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R LRTPHSGYHFDGS R+FFEGW+FK+++PE + SF F+Y++E P+F+      +  +YG
Sbjct: 86  RPLRTPHSGYHFDGSTRKFFEGWFFKVSIPECRQSFCFMYSVESPSFTKKLSSFEELQYG 145

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGE 567
           PRF G GAQ++   D ++ QYS+++S+FW SRHEL LGNTFVA+    PP  E
Sbjct: 146 PRFTGVGAQILGADDKYICQYSEESSNFWGSRHELMLGNTFVAQNSAKPPNKE 198


>tr|B7X941|B7X941_HEVBR Tocopherol cyclase OS=Hevea brasiliensis
           GN=tc PE=2 SV=1
          Length = 508

 Score =  147 bits (371), Expect = 5e-34
 Identities = 62/113 (54%), Positives = 83/113 (73%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R+LRTPHSGYHFDG+ R+FFEGWYFK+++PE K SF F+Y++E+PAF       +  ++G
Sbjct: 94  RELRTPHSGYHFDGTTRQFFEGWYFKVSIPERKESFCFMYSVENPAFRKKLSPLEVAQHG 153

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGE 567
           PR  G GAQ++   D ++ QYS+++ +FW SRHEL LGNTFVA  G  PP  E
Sbjct: 154 PRSTGVGAQILGASDKYICQYSEESQNFWGSRHELMLGNTFVAEKGMQPPSKE 206


>tr|Q0WW11|Q0WW11_ARATH Sucrose export defective 1 OS=Arabidopsis
           thaliana GN=At4g32770 PE=2 SV=1
          Length = 488

 Score =  147 bits (370), Expect = 7e-34
 Identities = 63/117 (53%), Positives = 83/117 (70%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R+LRTPHSGYHFDG+ R+FFEGWYF++++PE++ SF F+Y++E+PAF  +    +   YG
Sbjct: 73  RELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYG 132

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNE 579
           PRF G GAQ++   D +L QY QD+ +FW  RHEL LGNTF A PG   P  E   E
Sbjct: 133 PRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPE 189


>tr|Q2XV81|Q2XV81_HELAN Tocopherol cyclase OS=Helianthus annuus
           GN=TC PE=4 SV=1
          Length = 483

 Score =  144 bits (364), Expect = 4e-33
 Identities = 59/118 (50%), Positives = 87/118 (73%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R LR PHSGYHFDG+ R+FFEGWYFK+++PE++ SF F+Y++E+PAF  +    ++ ++G
Sbjct: 67  RPLRPPHSGYHFDGTTRKFFEGWYFKVSIPEQRQSFCFMYSVENPAFKKDLNILEQLQHG 126

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEV 582
           PRF G GAQ++   D ++ QYS+++ +FW SRHEL LGN+F  + G+ PP  E   +V
Sbjct: 127 PRFTGVGAQILGAHDKYICQYSKESHNFWGSRHELMLGNSFSVQTGKQPPNSEVPPQV 184


>tr|Q2XV80|Q2XV80_HELAN Tocopherol cyclase OS=Helianthus annuus
           GN=TC PE=4 SV=1
          Length = 483

 Score =  144 bits (364), Expect = 4e-33
 Identities = 59/118 (50%), Positives = 87/118 (73%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R LR PHSGYHFDG+ R+FFEGWYFK+++PE++ SF F+Y++E+PAF  +    ++ ++G
Sbjct: 67  RPLRPPHSGYHFDGTTRKFFEGWYFKVSIPEQRQSFCFMYSVENPAFKKDLNILEQLQHG 126

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEV 582
           PRF G GAQ++   D ++ QYS+++ +FW SRHEL LGN+F  + G+ PP  E   +V
Sbjct: 127 PRFTGVGAQILGAHDKYICQYSKESHNFWGSRHELMLGNSFSVQTGKQPPNSEVPPQV 184


>tr|B2ZSX9|B2ZSX9_PHAVU Tocopherol cyclase OS=Phaseolus vulgaris
           PE=2 SV=1
          Length = 494

 Score =  143 bits (361), Expect = 8e-33
 Identities = 60/113 (53%), Positives = 79/113 (69%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R LRTPHSGYHFDG+ R+FFEGWYFK+++PE + SF F+Y++E P+F       ++ +YG
Sbjct: 74  RDLRTPHSGYHFDGTSRKFFEGWYFKVSIPERRQSFCFMYSVESPSFRKPLSPLEQVQYG 133

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGE 567
           PRF G GAQ++   D ++ QYS ++  FW SRHEL LGNTFV      PP  E
Sbjct: 134 PRFTGVGAQILGADDKYICQYSPESQFFWGSRHELTLGNTFVPNQNSKPPNKE 186


>tr|Q1PBH4|Q1PBH4_GOSHI Tocopherol cyclase OS=Gossypium hirsutum
           GN=TC PE=2 SV=1
          Length = 481

 Score =  142 bits (359), Expect = 1e-32
 Identities = 60/117 (51%), Positives = 81/117 (69%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R  RTPHSGYHFDG+ R+FFEGWYFK+++PE K SF F+Y++E+P F     + +  ++G
Sbjct: 94  RDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHG 153

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNE 579
           PRF G GAQ++   D ++ QYS ++ +FW SRHEL LGNTF+A     PP  E   E
Sbjct: 154 PRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELILGNTFLANKNSRPPSKEVPPE 210


>tr|Q1PBH3|Q1PBH3_WHEAT Tocopherol cyclase OS=Triticum aestivum
           GN=TC PE=2 SV=1
          Length = 467

 Score =  142 bits (359), Expect = 1e-32
 Identities = 60/113 (53%), Positives = 81/113 (71%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R LRTPHSGYH+DG+ R FFEGWYFK+++PE + SF F+Y++E+P F       DR  YG
Sbjct: 55  RPLRTPHSGYHYDGTARAFFEGWYFKVSIPECRQSFCFMYSVENPFFRDGMTALDRTLYG 114

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGE 567
           P+F G GAQ++   D ++ Q+S+ +++FW SRHEL LGNTF+   G TPP  E
Sbjct: 115 PQFTGVGAQILGADDKYICQFSEKSNNFWGSRHELILGNTFIPNKGSTPPERE 167


>tr|Q7XAF0|Q7XAF0_EUCGU Tocopherol cyclase OS=Eucalyptus gunnii
           GN=Sxd1 PE=2 SV=1
          Length = 515

 Score =  142 bits (358), Expect = 2e-32
 Identities = 58/113 (51%), Positives = 83/113 (73%)
 Frame = +1

Query: 229 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 408
           R+ RTPHSGYH+DGS R+FFEGWYFK+++PE + SF F+Y++E+PAF       +  +YG
Sbjct: 101 RESRTPHSGYHWDGSSRKFFEGWYFKVSIPESRQSFCFMYSVENPAFPKKLSALEVAQYG 160

Query: 409 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGE 567
           PR+ G GAQ++   D ++ Q+S+++++FW SRHEL LGNTF+A     PP  E
Sbjct: 161 PRYTGVGAQILGADDKYICQFSEESANFWGSRHELILGNTFMAEKDAKPPNKE 213