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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951572
Clone id TST38A01NGRL0011_M07
Library
Length 690
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_M07. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
CAACGAGCAGGCCTGCTCGAGCGGAGTTTGTTCGCCACTTGTCTCTCTAGACGAGGGCTT
GTAGCTTGCTGCTTCCATGGCGTCTACTGCCACTAGCCCTACTGTTGGCTCCGTCCAGAA
TTTCACACCAGTAAATGGAACCCCCGTCCGTGTAAGGAGCACCGCTCCTGCTTCTGCCTT
CTTTGGGGCCTCCCTGAAGAAAACCGCCCCTTCCGTTGTATCTAGCAATATTGCCAAGCA
TTTCGTTGTGCACGCTTCGGAGGATGAGGGCAAGCAGACGAAGAAGGACAGATGGGCTGG
TCTTGCATATGACACCTCCGATGACCAGCAAGACATCACTCGTGGAAAAGGCATGGTGGA
CGCTCTTTTCCAAGGTGCAGTTGGTGTAGGAACTCAACACGCCGTCATGAGTTCGTATGA
CTATATTAGCCAGGGCCAGAGAATGTTCTCCATGGACAACATGAAGGATGGCTATTACAT
CGCCCCTGCCTTCATGGACAAACTGGTTGTGCACATTGCCAAGAACTTCATGAACTTACC
AAATATCAAGGTGCCTTTGATTCTTGGTATTTGGGGTGGCAAGGGGCAAGGCAAGTCCTT
CCAGTGTGAGCTTGTCTTTTCAAAGTTGGGAATCAACCCAATCATGATGAGTGCCGGAGA
GCTCGAGAGTGGCAATGCTGGTGAGCCTGC
■■Homology search results ■■ -
sp_hit_id Q7X999
Definition sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata
Align length 186
Score (bit) 261.0
E-value 2.0e-69
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951572|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_M07, 5'
         (690 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   261   2e-69
sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   261   2e-69
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   254   3e-67
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   254   4e-67
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   253   5e-67
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   253   7e-67
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   251   2e-66
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   250   4e-66
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   250   6e-66
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   246   1e-64
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   244   2e-64
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   244   4e-64
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   243   7e-64
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   237   5e-62
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   229   1e-59
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   185   2e-46
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...   106   1e-22
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...   106   1e-22
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...   104   4e-22
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    46   2e-04
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus...    35   0.38 
sp|Q55EL3|UCKA_DICDI Uridine/cytidine kinase A OS=Dictyostelium ...    33   1.1  
sp|Q7ZV79|UCK2B_DANRE Uridine-cytidine kinase 2-B OS=Danio rerio...    33   1.9  
sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ...    33   1.9  
sp|Q7ZX23|KCY_XENLA UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE...    33   1.9  
sp|Q4KM73|KCY_RAT UMP-CMP kinase OS=Rattus norvegicus GN=Cmpk1 P...    32   4.2  
sp|Q9DBP5|KCY_MOUSE UMP-CMP kinase OS=Mus musculus GN=Cmpk1 PE=1...    32   4.2  
sp|P30085|KCY_HUMAN UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1...    32   4.2  
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem...    32   4.2  
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom...    32   4.2  

>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  261 bits (668), Expect = 2e-69
 Identities = 128/186 (68%), Positives = 150/186 (80%)
 Frame = +2

Query: 131 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 310
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 311 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 490
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 491 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 670
           FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 671 GNAGEP 688
           GNAGEP
Sbjct: 197 GNAGEP 202


>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  261 bits (668), Expect = 2e-69
 Identities = 128/186 (68%), Positives = 150/186 (80%)
 Frame = +2

Query: 131 VNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAY 310
           +NG+  R  S  P++AFFG+SLKK+A     ++     +V     E +QT KD+W GLAY
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 311 DTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPA 490
           D SDDQQDITRGKGMVD LFQ  +  GT +AVMSSYDYISQG R +++DN  DG+YIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 491 FMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELES 670
           FMDKLVVHI KNF++LPNIK+PLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 671 GNAGEP 688
           GNAGEP
Sbjct: 197 GNAGEP 202


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  254 bits (649), Expect = 3e-67
 Identities = 130/196 (66%), Positives = 150/196 (76%), Gaps = 1/196 (0%)
 Frame = +2

Query: 104 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAKHFV-VHASEDEGKQT 280
           +GSV N  P N       ++ P+S F G+SLKK      +S ++   + + AS DE KQT
Sbjct: 8   IGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQT 66

Query: 281 KKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDN 460
            KDRW GLA+DTSDDQQDITRGKG VD+LFQ   G GT  A+MSSY+YIS G R ++ DN
Sbjct: 67  DKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDN 126

Query: 461 MKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINP 640
             DGYYIAPAFMDKLVVHI KNFM LPN+KVPLILGIWGGKGQGKSFQCELVF+K+ I+P
Sbjct: 127 NMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISP 186

Query: 641 IMMSAGELESGNAGEP 688
           IMMSAGELESGNAGEP
Sbjct: 187 IMMSAGELESGNAGEP 202


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  254 bits (648), Expect = 4e-67
 Identities = 121/174 (69%), Positives = 142/174 (81%)
 Frame = +2

Query: 167 PASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRG 346
           P SAF G+ LK ++    S  +  +F + A +DE KQT+KD+W GLA+DTSDDQQDITRG
Sbjct: 26  PNSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRG 85

Query: 347 KGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKN 526
           KG+ D LFQ  +G GT +AV+SSY+YIS G R +S DN  DG+YIAPAFMDKL VHI KN
Sbjct: 86  KGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKN 145

Query: 527 FMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 688
           F+ LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAGEP
Sbjct: 146 FLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEP 199


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  253 bits (647), Expect = 5e-67
 Identities = 129/182 (70%), Positives = 148/182 (81%), Gaps = 5/182 (2%)
 Frame = +2

Query: 158 STAPASAFFGASLKKTAPSVVSSNIAKH--FVVHASE---DEGKQTKKDRWAGLAYDTSD 322
           ++AP SAFFG SLKK   S V ++   +  F + A+E   +E +QT KDRW GLAYD SD
Sbjct: 25  ASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISD 84

Query: 323 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 502
           DQQDITRGKGMVD LFQ  +  GT +AVMSSY+Y+S G R   +DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDK 142

Query: 503 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 682
           LVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG
Sbjct: 143 LVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 202

Query: 683 EP 688
           EP
Sbjct: 203 EP 204


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  253 bits (646), Expect = 7e-67
 Identities = 130/183 (71%), Positives = 142/183 (77%), Gaps = 8/183 (4%)
 Frame = +2

Query: 164 APASA---FFGASLKKTAPSVV-----SSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTS 319
           APAS    F G  LKK   S V     SSNI +  V+    DEGKQT +DRW GLAYD S
Sbjct: 11  APASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDIS 70

Query: 320 DDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMD 499
           DDQQDITRGKG VD+LFQ   G GT  AV+SSY+Y+SQG R +  DN   G+YIAPAFMD
Sbjct: 71  DDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMD 130

Query: 500 KLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNA 679
           KLVVHI+KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNA
Sbjct: 131 KLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 190

Query: 680 GEP 688
           GEP
Sbjct: 191 GEP 193


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  251 bits (642), Expect = 2e-66
 Identities = 130/203 (64%), Positives = 149/203 (73%), Gaps = 10/203 (4%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS----NIAKHFVVHASE 262
           SV     VN TP+ + ++      P++AFFG +LKK     VSS    N +   V    +
Sbjct: 4   SVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQID 63

Query: 263 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 439
            D  KQT  DRW GL  D SDDQQDITRGKGMVD+LFQ   G GT HAV+ SY+Y+SQG 
Sbjct: 64  VDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 440 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 619
           R +++DN  DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF
Sbjct: 124 RQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVF 183

Query: 620 SKLGINPIMMSAGELESGNAGEP 688
            K+GINPIMMSAGELESGNAGEP
Sbjct: 184 RKMGINPIMMSAGELESGNAGEP 206


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  250 bits (639), Expect = 4e-66
 Identities = 121/176 (68%), Positives = 140/176 (79%)
 Frame = +2

Query: 161 TAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDIT 340
           +APAS F G  +   +    S+  +       +  E KQT  DRW GLAYDTSDDQQDIT
Sbjct: 27  SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDIT 86

Query: 341 RGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIA 520
           RGKGMVD++FQ  +G GT HAV+SSY+Y+SQG R +++DNM DG+YIAPAFMDKLVVHI 
Sbjct: 87  RGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHIT 146

Query: 521 KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 688
           KNF+ LPNIKVPLILGIWGGKGQGKSFQCELV +K+GINPIMMSAGELESGNAGEP
Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEP 202


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  250 bits (638), Expect = 6e-66
 Identities = 123/182 (67%), Positives = 150/182 (82%), Gaps = 5/182 (2%)
 Frame = +2

Query: 158 STAPASAFFGASLKKTAPSVVSSN--IAKHFVVHASE---DEGKQTKKDRWAGLAYDTSD 322
           ++ P+SAFFG SLKK   S V ++   +  F + A++   +E +QT+ DRW GLAYD SD
Sbjct: 25  ASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSD 84

Query: 323 DQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDK 502
           DQQDITRGKG+VD+LFQ  +  GT +AV+SS+ Y+S G R ++ DN+KDG+YIAPAF+DK
Sbjct: 85  DQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDK 144

Query: 503 LVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAG 682
           LVVHIAKNFM LPNIKVPLILG+WGGKGQGKSFQCELVF+K+GINPIMMSAGELESGNAG
Sbjct: 145 LVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 204

Query: 683 EP 688
           EP
Sbjct: 205 EP 206


>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA
           PE=2 SV=1
          Length = 439

 Score =  246 bits (627), Expect = 1e-64
 Identities = 126/203 (62%), Positives = 147/203 (72%), Gaps = 10/203 (4%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSS-NIAKHFVVHASE--- 262
           SV      N  P+ + ++      P++AFFG +LKK     VSS  +    +  A+E   
Sbjct: 4   SVSTIGAANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKD 63

Query: 263 -DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQ 439
            D  KQT  DRW GL  D SDDQQDI RGKGMVD+LFQ   G GT HAV+ SY+Y+SQG 
Sbjct: 64  ADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGL 123

Query: 440 RMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF 619
           R ++MDN  DG+YIAP+FMDKLVVHI KNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF
Sbjct: 124 RQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVF 183

Query: 620 SKLGINPIMMSAGELESGNAGEP 688
            K+GINPIMMSAGELESGNAGEP
Sbjct: 184 RKMGINPIMMSAGELESGNAGEP 206
tr_hit_id A7NYV5
Definition tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 199
Score (bit) 267.0
E-value 5.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951572|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_M07, 5'
         (690 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   267   5e-70
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   267   5e-70
tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   266   1e-69
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   261   4e-68
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   260   5e-68
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   260   5e-68
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   260   7e-68
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   260   7e-68
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   260   7e-68
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   260   7e-68
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   259   9e-68
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   258   2e-67
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   257   4e-67
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   256   7e-67
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   256   7e-67
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   256   7e-67
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   255   2e-66
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   253   6e-66
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   253   6e-66
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   253   6e-66
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   253   8e-66
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   253   8e-66
tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t...   253   8e-66
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   252   2e-65
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   250   5e-65
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   250   5e-65
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar...   250   5e-65
tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten...   250   7e-65
tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   248   2e-64
tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car...   248   2e-64

>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  267 bits (682), Expect = 5e-70
 Identities = 136/199 (68%), Positives = 155/199 (77%), Gaps = 6/199 (3%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 271
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 272 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 451
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 452 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 631
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 632 INPIMMSAGELESGNAGEP 688
           INPIMMSAGELESGNAGEP
Sbjct: 184 INPIMMSAGELESGNAGEP 202


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  267 bits (682), Expect = 5e-70
 Identities = 136/199 (68%), Positives = 155/199 (77%), Gaps = 6/199 (3%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEG 271
           +V     VN TP+ + S+      P+SAFFG+SLKK +       IA   F V A  DE 
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDEN 63

Query: 272 KQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFS 451
           +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+Y+S G R ++
Sbjct: 64  EQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYN 123

Query: 452 MDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLG 631
           +DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVFSK+G
Sbjct: 124 LDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSKMG 183

Query: 632 INPIMMSAGELESGNAGEP 688
           INPIMMSAGELESGNAGEP
Sbjct: 184 INPIMMSAGELESGNAGEP 202


>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
          Length = 471

 Score =  266 bits (679), Expect = 1e-69
 Identities = 134/180 (74%), Positives = 149/180 (82%)
 Frame = +2

Query: 149 RVRSTAPASAFFGASLKKTAPSVVSSNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQ 328
           RV+ST P+SAFFG   K +A   +     K  VV  +E E  +TK DRWAGL  D SDDQ
Sbjct: 17  RVKSTVPSSAFFGCKSKVSANGTLGIANGKSRVV--AEAESSKTKVDRWAGLGNDISDDQ 74

Query: 329 QDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLV 508
           QDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQGQR +SMDN+KDG YIAPAFMDKLV
Sbjct: 75  QDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLV 134

Query: 509 VHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSAGELESGNAGEP 688
           +HIAKNFMNLP IKVPLILGIWGGKGQGKSFQCELV SKLGINPI+MSAGELESGNAGEP
Sbjct: 135 IHIAKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSKLGINPIVMSAGELESGNAGEP 194


>tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021361001
           PE=4 SV=1
          Length = 474

 Score =  261 bits (666), Expect = 4e-68
 Identities = 130/191 (68%), Positives = 149/191 (78%), Gaps = 1/191 (0%)
 Frame = +2

Query: 119 NFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSSNIAK-HFVVHASEDEGKQTKKDRW 295
           N  P+N       ++ P+SAF G SLKK +  +     +  +F V A  DE KQT KD+W
Sbjct: 12  NRAPLNLNGSGTGASVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKW 71

Query: 296 AGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMKDGY 475
            GLA+D SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSYDYIS G R +++DN  DG+
Sbjct: 72  KGLAFDESDDQQDITRGKGMVDSLFQAPMDSGTHYAVMSSYDYISTGLRQYNLDNTMDGF 131

Query: 476 YIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIMMSA 655
           YIAPAFMDKLVVHI KNFM LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GINPIMMSA
Sbjct: 132 YIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA 191

Query: 656 GELESGNAGEP 688
           GELESGNAGEP
Sbjct: 192 GELESGNAGEP 202


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  260 bits (665), Expect = 5e-68
 Identities = 133/200 (66%), Positives = 153/200 (76%), Gaps = 7/200 (3%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 268
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 269 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 448
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 449 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 628
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 629 GINPIMMSAGELESGNAGEP 688
           GI PIMMSAGELESGNAGEP
Sbjct: 183 GITPIMMSAGELESGNAGEP 202


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  260 bits (665), Expect = 5e-68
 Identities = 133/200 (66%), Positives = 153/200 (76%), Gaps = 7/200 (3%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTAPSVVSSNI-AKHFVVHASEDE 268
           +V     +N  P+ +       ST P SAFFG SLKK A    +  + +  F V A  DE
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDE 63

Query: 269 GKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMF 448
            KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYDYIS G R +
Sbjct: 64  NKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY 123

Query: 449 SMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKL 628
            ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVF+K+
Sbjct: 124 -LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAKM 182

Query: 629 GINPIMMSAGELESGNAGEP 688
           GI PIMMSAGELESGNAGEP
Sbjct: 183 GITPIMMSAGELESGNAGEP 202


>tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 476

 Score =  260 bits (664), Expect = 7e-68
 Identities = 136/197 (69%), Positives = 154/197 (78%), Gaps = 2/197 (1%)
 Frame = +2

Query: 104 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPS-VVSSNIAK-HFVVHASEDEGKQ 277
           VG+V N  P+        ST P SAFFG SLKK + S   +S I+   F V A  DE KQ
Sbjct: 8   VGAV-NTAPLALNGSGAGSTVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQ 66

Query: 278 TKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMD 457
           T KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + ++SSY+Y+SQG R +++D
Sbjct: 67  TDKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPILSSYEYLSQGLRTYNLD 126

Query: 458 NMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGIN 637
           N  DGYYIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVF+K+GIN
Sbjct: 127 NNMDGYYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGIN 186

Query: 638 PIMMSAGELESGNAGEP 688
           PIMMSAGELESGNAGEP
Sbjct: 187 PIMMSAGELESGNAGEP 203


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 363

 Score =  260 bits (664), Expect = 7e-68
 Identities = 128/194 (65%), Positives = 150/194 (77%), Gaps = 1/194 (0%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 286
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 287 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 466
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 467 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 646
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 647 MSAGELESGNAGEP 688
           MSAGELESG+AGEP
Sbjct: 192 MSAGELESGDAGEP 205


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 440

 Score =  260 bits (664), Expect = 7e-68
 Identities = 128/194 (65%), Positives = 150/194 (77%), Gaps = 1/194 (0%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 286
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 287 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 466
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 467 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 646
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 647 MSAGELESGNAGEP 688
           MSAGELESG+AGEP
Sbjct: 192 MSAGELESGDAGEP 205


>tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 480

 Score =  260 bits (664), Expect = 7e-68
 Identities = 128/194 (65%), Positives = 150/194 (77%), Gaps = 1/194 (0%)
 Frame = +2

Query: 110 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTAPSVVSS-NIAKHFVVHASEDEGKQTKK 286
           +V +  P++     +  T P++ FFG  LKKT+ +   +   A HF V A  DEGKQT K
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTSFNASHTFTKANHFKVVAEIDEGKQTDK 71

Query: 287 DRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRMFSMDNMK 466
           D+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS+YDYIS  QR +  DN  
Sbjct: 72  DKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMSTYDYISTAQRTYDFDNTM 131

Query: 467 DGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFSKLGINPIM 646
           DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGIWGGKGQGKSFQCELVF+KLGINPIM
Sbjct: 132 DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAKLGINPIM 191

Query: 647 MSAGELESGNAGEP 688
           MSAGELESG+AGEP
Sbjct: 192 MSAGELESGDAGEP 205