DK951588
Clone id TST38A01NGRL0011_M23
Library
Length 681
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_M23. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CGTCCTCCTACCCGGCGTGTTTTGCGTGGTTGCCTCTCCCTCTTCCTCCTCCTCCTCCTC
CTCTCCTAGTACGTCCCCGTTCAATCTTCCCGTAAGAGGAGGGAGAGAGAGAGAGAGAGT
GAGAGAAGAGAGGGTGTGAGGCACACATAGCTCTACCACTTCGGCAGCAACGAGAACCAG
GGCCAGTAAATCAGCGTTCGTCCCTCGTCTTTTTCTGCACAATCTCTCTTCCTGTTTGCA
ATTGGGCGATCCACCAGGTTAAGTGCAGCTGTGCGTGTACATTCTTCTCTCTTGGGCGCT
ATTGTACTACAGGCAAGCTTCTGATTCTTCAACGAATCTGGCACATTTTCCTGATCAGTG
ATCGATCTCACGGAAACTGCAGCACAGATTGGAGAAGACTCCCTTTGCCCTTCTTTACCG
AGTTACAGAGTTCCGTTTGCCTCTATTACGACTTGCAAGTAGCAAGGAAAGCATTGATAT
TTTGGAGTCCGTTTACTAGTTTCCAAACCCCTGCTTATCAGGGCTTGTAAAGAAACTACA
TTTTGACATTGCGACCTAGCGCAGTCAATTATCTGCATTGTTCATTGTGCCGTTCACTAG
ATCGTCCCTTGGTTGCAGGCCATCTAAATTCTAAATTCTTCTTGTCATCCTGAATGCATA
TAACAAGCAGCCTGCAATGCA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951588|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_M23, 5'
(681 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A1D7N2
Definition tr|A1D7N2|A1D7N2_NEOFI F-box and JmjC domain protein, putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
Align length 63
Score (bit) 34.7
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK951588|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_M23, 5'
(681 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1D7N2|A1D7N2_NEOFI F-box and JmjC domain protein, putative O... 35 5.8
tr|Q038U4|Q038U4_LACC3 DNA primase OS=Lactobacillus casei (strai... 34 9.8
tr|B6K9T9|B6K9T9_TOXGO Putative uncharacterized protein OS=Toxop... 34 9.8

>tr|A1D7N2|A1D7N2_NEOFI F-box and JmjC domain protein, putative
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181) GN=NFIA_068970 PE=4 SV=1
Length = 505

Score = 34.7 bits (78), Expect = 5.8
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3

Query: 468 KALIFWSPFTSFQTPAYQGL*RNYILTLRPSAVNYLHCS--LCRSLDRPLVAGHLNSKFF 641
KAL WSP +SF ++G R+ L L PS V L CS +L RP H++ +
Sbjct: 103 KALFVWSPPSSF---TWRGTWRSTYLNLPPSKVAILDCSSLFSDALHRPFYCAHISLDAY 159

Query: 642 LSS 650
+++
Sbjct: 160 VNN 162


>tr|Q038U4|Q038U4_LACC3 DNA primase OS=Lactobacillus casei (strain
ATCC 334) GN=LSEI_1502 PE=4 SV=1
Length = 595

Score = 33.9 bits (76), Expect = 9.8
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Frame = -2

Query: 557 RSQCQNVVSLQALISRGLETSKRTPKYQCFPCYLQVVIEANGTL*LGKEGQRESSPICAA 378
++Q ++V++ A I + L Q YL ++ G + S+P+ A
Sbjct: 355 QAQVKSVLTPTAFILQFLARGVDMNNDQAKLTYLNAALKTIGKI---------SNPVARA 405

Query: 377 VSVRSITDQENVPDSLKNQKLACSTIAPKREECT----RTAALNLVDRPIANRKRDCAEK 210
V V+ + D VP+S NQ L A +++ +TA +N RPI R A +
Sbjct: 406 VYVKQLADTTGVPESALNQSLPAPQQAVQQQSSAPVSYQTAPVNQPVRPI---DRYTAAQ 462

Query: 209 DEGRTLIYWPW 177
R L+Y+ W
Sbjct: 463 ---RQLLYYVW 470


>tr|B6K9T9|B6K9T9_TOXGO Putative uncharacterized protein OS=Toxoplasma
gondii ME49 GN=TGME49_116470 PE=4 SV=1
Length = 3152

Score = 33.9 bits (76), Expect = 9.8
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 9/67 (13%)
Frame = -3

Query: 325 IRSLPVVQ*RPREKNVHAQLHLTWWIA-----QLQTGREIVQKKTRDER*FTGPGSRC-- 167
+ +L V+ + +HA L WW+A +L RE V+KKTR+ R PG RC
Sbjct: 2526 LEALAAVRPSLPDLGLHAPLDRLWWLAAARLEELLKPRE-VEKKTREARQSRRPGQRCTD 2584

Query: 166 --CRSGR 152
CR R
Sbjct: 2585 ASCRDER 2591