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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951640
Clone id TST38A01NGRL0011_P03
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0011_P03. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TGCTGAGCAGGATTACGAAAAGGAAAAATTGAATGAAAGGATTGCCAAACTCTCTGGTGG
TGTTGCCATTATTCAGGTTGGAGCACAAACAGAAACAGAGTTGAAGGAGAAGAAGCTTCG
AGTTGAGGATGCTTTGAATGCAACAAAGGCCGCTGTAGAAGAAGGTATCGTAGTAGGTGG
AGGTTGTACACTGCTTCGCCTAGCAGCTAAAGTGGAGGGAGTAAAGGCAATCTTAGAAAA
CAATGAACAGAAGGTTGGTGCAGATATAGTGCAGAGGGCATTGAGTTATCCCCTCAAACT
CATAGCAAAGAATGCAGGGGTAAATGGCAGTGTTGTTGAGGAGAAAGTGCTTTCTAATGA
TGACTTCAAATTCGGCTATAATGCGGCCACAGGAAAGTATGAAGATCTTATGGCTGCTGG
CATTATCGACCCTACAAAGGTTGTAAGGTGTTGCCTTGAACATGCTGCATCCGTGGCAAA
GACTTTTCTCACATCGGATGCTGTGGTCGTCGATATTAAAGAACCTGAGGTTGCTGCTCC
TGTGGGAAACCCTATGGATAATTCTGGATATGGTTATTAAGGTACTGGCTGGAAAAGGAT
GTAAGCCTTTTTAAAACCGTTTCTGATGCTGATGCTCCACATTGATAGAAGTGATTGCAG
ATGAC
■■Homology search results ■■ -
sp_hit_id P21240
Definition sp|P21240|RUBB_ARATH RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana
Align length 192
Score (bit) 315.0
E-value 1.0e-85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951640|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_P03, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P21240|RUBB_ARATH RuBisCO large subunit-binding protein subun...   315   1e-85
sp|Q43831|RUBB_SECCE RuBisCO large subunit-binding protein subun...   313   5e-85
sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit...   302   9e-82
sp|P21241|RUBB_BRANA RuBisCO large subunit-binding protein subun...   290   4e-78
sp|Q42695|RUBC_CHLRE RuBisCO large subunit-binding protein subun...   238   3e-62
sp|Q42693|RUBB_CHLRE RuBisCO large subunit-binding protein subun...   222   1e-57
sp|Q119S1|CH601_TRIEI 60 kDa chaperonin 1 OS=Trichodesmium eryth...   200   5e-51
sp|Q5N3T6|CH602_SYNP6 60 kDa chaperonin 2 OS=Synechococcus sp. (...   197   4e-50
sp|Q3M6L5|CH602_ANAVT 60 kDa chaperonin 2 OS=Anabaena variabilis...   193   8e-49
sp|P22034|CH602_SYNY3 60 kDa chaperonin 2 OS=Synechocystis sp. (...   192   1e-48
sp|Q8YVS8|CH602_ANASP 60 kDa chaperonin 2 OS=Anabaena sp. (strai...   191   2e-48
sp|Q7WVY0|CH602_ANASL 60 kDa chaperonin 2 OS=Anabaena sp. (strai...   190   7e-48
sp|B0CFQ6|CH601_ACAM1 60 kDa chaperonin 1 OS=Acaryochloris marin...   182   1e-45
sp|P0A338|CH602_THEVL 60 kDa chaperonin 2 OS=Thermosynechococcus...   181   3e-45
sp|P0A337|CH602_THEEB 60 kDa chaperonin 2 OS=Thermosynechococcus...   181   3e-45
sp|A5GNA9|CH602_SYNPW 60 kDa chaperonin 2 OS=Synechococcus sp. (...   179   9e-45
sp|Q2JKV7|CH602_SYNJB 60 kDa chaperonin 2 OS=Synechococcus sp. G...   179   2e-44
sp|Q2IFK0|CH602_ANADE 60 kDa chaperonin 2 OS=Anaeromyxobacter de...   178   3e-44
sp|Q2JXD4|CH601_SYNJA 60 kDa chaperonin 1 OS=Synechococcus sp. (...   178   3e-44
sp|Q7MBC7|CH601_GLOVI 60 kDa chaperonin 1 OS=Gloeobacter violace...   178   3e-44
sp|P19421|CH60_COXBU 60 kDa chaperonin OS=Coxiella burnetii GN=g...   177   3e-44
sp|A9NA82|CH60_COXBR 60 kDa chaperonin OS=Coxiella burnetii (str...   177   3e-44
sp|A9KC15|CH60_COXBN 60 kDa chaperonin OS=Coxiella burnetii (str...   177   3e-44
sp|Q162U5|CH602_ROSDO 60 kDa chaperonin 2 OS=Roseobacter denitri...   177   3e-44
sp|A8I5R5|CH602_AZOC5 60 kDa chaperonin 2 OS=Azorhizobium caulin...   177   6e-44
sp|A9GB11|CH601_SORC5 60 kDa chaperonin 1 OS=Sorangium cellulosu...   176   1e-43
sp|Q0I885|CH601_SYNS3 60 kDa chaperonin 1 OS=Synechococcus sp. (...   176   1e-43
sp|Q7MBB4|CH602_GLOVI 60 kDa chaperonin 2 OS=Gloeobacter violace...   175   2e-43
sp|P21239|RUB1_BRANA RuBisCO large subunit-binding protein subun...   174   3e-43
sp|Q8GBD2|CH60_ACEAC 60 kDa chaperonin OS=Acetobacter aceti GN=g...   174   3e-43

>sp|P21240|RUBB_ARATH RuBisCO large subunit-binding protein subunit
           beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490
           PE=1 SV=3
          Length = 600

 Score =  315 bits (807), Expect = 1e-85
 Identities = 163/192 (84%), Positives = 173/192 (90%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQDYEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 410 AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 469

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +KA L+N+E+KVGADIV+RALSYPLKLIAKNAGVNGSVV EKVLSND
Sbjct: 470 GCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSND 529

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           + KFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD VVV+IKEPE   P
Sbjct: 530 NVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPE-PVP 588

Query: 542 VGNPMDNSGYGY 577
           VGNPMDNSGYGY
Sbjct: 589 VGNPMDNSGYGY 600


>sp|Q43831|RUBB_SECCE RuBisCO large subunit-binding protein subunit
           beta, chloroplastic (Fragment) OS=Secale cereale
           GN=CPN60 PE=2 SV=1
          Length = 499

 Score =  313 bits (802), Expect = 5e-85
 Identities = 162/192 (84%), Positives = 174/192 (90%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQDYEKEKLNERIAKL+GGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 309 AEQDYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 368

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLAAKV+ +K  LEN+EQKVGA+IV+RAL YPLKLIAKNAGVNGSVV EKVLSND
Sbjct: 369 GCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSND 428

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           +FKFGYNAATG+YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD VVV+IKEPE AAP
Sbjct: 429 NFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPE-AAP 487

Query: 542 VGNPMDNSGYGY 577
           + NPMDNSG+GY
Sbjct: 488 LANPMDNSGFGY 499


>sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit
           beta, chloroplastic OS=Pisum sativum PE=1 SV=2
          Length = 595

 Score =  302 bits (774), Expect = 9e-82
 Identities = 157/191 (82%), Positives = 172/191 (90%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQ+YEKEKL+ERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 404 AEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 463

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +K  L N+E+KVGADIV+RALSYPLKLIAKNAGVNGSVV EKVLS+D
Sbjct: 464 GCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSD 523

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           + K+GYNAATGKYEDLMAAGIIDPTKVVRCCLEHA+SVAKTFL SD VVV+IKEPE +AP
Sbjct: 524 NPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-SAP 582

Query: 542 VGNPMDNSGYG 574
           VGNPMDNSGYG
Sbjct: 583 VGNPMDNSGYG 593


>sp|P21241|RUBB_BRANA RuBisCO large subunit-binding protein subunit
           beta, chloroplastic OS=Brassica napus PE=2 SV=1
          Length = 588

 Score =  290 bits (743), Expect = 4e-78
 Identities = 150/176 (85%), Positives = 160/176 (90%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQDYEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 410 AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 469

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +KA L+N+E+KVGADIV+RALSYPLKLIAKNAGVNGSVV EKVLSND
Sbjct: 470 GCTLLRLASKVDAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSND 529

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPE 529
           + KFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD VVV+IKEPE
Sbjct: 530 NVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPE 585


>sp|Q42695|RUBC_CHLRE RuBisCO large subunit-binding protein subunit
           beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1
          Length = 259

 Score =  238 bits (606), Expect = 3e-62
 Identities = 126/178 (70%), Positives = 143/178 (80%), Gaps = 1/178 (0%)
 Frame = +2

Query: 5   EQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXX 184
           EQ+YEKEKLNERIA+LSGGVAIIQVGAQTETELKEKKLRVEDALNATKAA          
Sbjct: 72  EQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGG 131

Query: 185 CTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSN-D 361
           CTLLRL+ KV+ +K  L N EQK+GADI++RALSYP+KLIA NAG NGSVV ++V+ N D
Sbjct: 132 CTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNID 191

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVA 535
              +GYNAAT  +EDLM AGIIDPTKVVRC LE+A SVAKTFL +D VV +I E E A
Sbjct: 192 QPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVVVTEIPEKEKA 249


>sp|Q42693|RUBB_CHLRE RuBisCO large subunit-binding protein subunit
           beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1
          Length = 435

 Score =  222 bits (566), Expect = 1e-57
 Identities = 120/194 (61%), Positives = 148/194 (76%), Gaps = 1/194 (0%)
 Frame = +2

Query: 5   EQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXX 184
           +QDYE+EKL ERIA+LSGGVAIIQVGAQTETELKEKKLRVEDALNAT+AA          
Sbjct: 241 DQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGG 300

Query: 185 CTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSN-D 361
           CTLLRL+ KV+ +K  + + EQ++GADI++RAL YP+KLIA+NAGVNGSVV  +V+ N D
Sbjct: 301 CTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLD 360

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
              +GYNAAT  +E+LM  GIIDP+KVVRC +E+A SVAKTFL +D VV ++KE E  A 
Sbjct: 361 RPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVVVTELKEIEAGAK 420

Query: 542 VGNPMDNSGYGY*G 583
             NP+     G+ G
Sbjct: 421 -PNPVAPGAAGFGG 433


>sp|Q119S1|CH601_TRIEI 60 kDa chaperonin 1 OS=Trichodesmium
           erythraeum (strain IMS101) GN=groL1 PE=3 SV=1
          Length = 561

 Score =  200 bits (509), Expect = 5e-51
 Identities = 111/196 (56%), Positives = 138/196 (70%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           ++ DY+KEKL ERIAKL+GGVA+I+VGA TETELK++KLR+EDALNATKAA         
Sbjct: 354 SDSDYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGG 413

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
             TL+ L+ KVE +K  L N E+K+GADIV+RAL  PL  IA N+GV GSV+ EKV S  
Sbjct: 414 GTTLIHLSTKVEELKGSLNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRST- 472

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           DF  GYN  TG+YEDL+AAGI+DP  VVR  L++A S+A   LT++AVVV+  E + AAP
Sbjct: 473 DFSVGYNVITGEYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAVVVEKPEKKGAAP 532

Query: 542 VGNPMDNSGYGY*GTG 589
               MD    G  G G
Sbjct: 533 ---DMDGGMGGMGGMG 545


>sp|Q5N3T6|CH602_SYNP6 60 kDa chaperonin 2 OS=Synechococcus sp.
           (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2
           PE=3 SV=1
          Length = 555

 Score =  197 bits (501), Expect = 4e-50
 Identities = 106/188 (56%), Positives = 133/188 (70%)
 Frame = +2

Query: 5   EQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXX 184
           + DY++EKL ERIAKL+GGVA+I+VGA TETELK +KLR+EDALNAT+AA          
Sbjct: 356 DSDYDREKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGVVPGGG 415

Query: 185 CTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSNDD 364
            TLL LA+ +  ++A L   ++K+G +IV RAL  PL+ IA NAG  GSVV EK L + D
Sbjct: 416 TTLLHLASALTSLQASLTVADEKLGVEIVARALEAPLRQIADNAGAEGSVVVEK-LRDKD 474

Query: 365 FKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPV 544
           F FGYNA TG+YEDL+A+GI+DP KVVR  L+ AASVA   LT++ +VVD  EPE A P 
Sbjct: 475 FNFGYNALTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVLVVDQPEPEPAMPA 534

Query: 545 GNPMDNSG 568
           G  M   G
Sbjct: 535 GGDMGGMG 542


>sp|Q3M6L5|CH602_ANAVT 60 kDa chaperonin 2 OS=Anabaena variabilis
           (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2
          Length = 560

 Score =  193 bits (490), Expect = 8e-49
 Identities = 104/188 (55%), Positives = 137/188 (72%)
 Frame = +2

Query: 5   EQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXX 184
           + +Y+ EKL ERIAKL+GG+A+I+VGA TETELK++KLR+EDALNATKAA          
Sbjct: 355 DSEYDSEKLQERIAKLAGGIAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGG 414

Query: 185 CTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSNDD 364
            TL+ LA+KV+ +K   +  E+K+GADIV+RAL  PL+ IA NAGV GSV+  +V  + D
Sbjct: 415 KTLIYLASKVDEIKKNFD-EEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRV-KDSD 472

Query: 365 FKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPV 544
           F  GYNAATG++EDL+AAGIIDP KVVR  L++AAS+A   LT++A+VV+  E + AAP 
Sbjct: 473 FNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAIVVEKPEKKAAAPA 532

Query: 545 GNPMDNSG 568
              M   G
Sbjct: 533 DAGMGGMG 540


>sp|P22034|CH602_SYNY3 60 kDa chaperonin 2 OS=Synechocystis sp.
           (strain PCC 6803) GN=groL2 PE=1 SV=4
          Length = 552

 Score =  192 bits (489), Expect = 1e-48
 Identities = 106/189 (56%), Positives = 135/189 (71%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           ++ DY+KEK+ ERIAKL+GGVA+I+VGA TETELK++KLR+EDALNATKAA         
Sbjct: 356 SDSDYDKEKIQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGG 415

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
             TL+RLA K+E  KA L N+E++V ADI+ +AL  PL  +A NAGV GSV+ EKV    
Sbjct: 416 GTTLIRLAGKIESFKAQLSNDEERVAADIIAKALEAPLHQLASNAGVEGSVIVEKVKEAT 475

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
             + GYN  TGK EDL+AAGIIDP KVVR  L++AAS+A   LT++A+VV+  +PE AAP
Sbjct: 476 GNQ-GYNVITGKIEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTEALVVE--KPEPAAP 532

Query: 542 VGNPMDNSG 568
               M   G
Sbjct: 533 AMPDMGGMG 541
tr_hit_id Q6B7Q9
Definition tr|Q6B7Q9|Q6B7Q9_MAIZE RuBisCo subunit binding-protein beta subunit (Fragment) OS=Zea mays
Align length 192
Score (bit) 315.0
E-value 2.0e-84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951640|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0011_P03, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6B7Q9|Q6B7Q9_MAIZE RuBisCo subunit binding-protein beta subu...   315   2e-84
tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subs...   311   2e-83
tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza...   311   2e-83
tr|P93570|P93570_SOLTU Chaperonin-60 beta subunit OS=Solanum tub...   308   3e-82
tr|Q9LJE4|Q9LJE4_ARATH GloEL protein; chaperonin, 60 kDa OS=Arab...   307   3e-82
tr|A9PF58|A9PF58_POPTR Putative uncharacterized protein OS=Popul...   305   1e-81
tr|Q6ZFJ9|Q6ZFJ9_ORYSJ Os02g0102900 protein OS=Oryza sativa subs...   305   2e-81
tr|Q0WRG9|Q0WRG9_ARATH RuBisCO subunit binding-protein beta subu...   305   2e-81
tr|B8AGV6|B8AGV6_ORYSI Putative uncharacterized protein OS=Oryza...   305   2e-81
tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea...   305   2e-81
tr|A3A263|A3A263_ORYSJ Putative uncharacterized protein OS=Oryza...   305   2e-81
tr|Q0W9E2|Q0W9E2_SOLCO Beta chaperonin 60 OS=Solanum commersonii...   305   2e-81
tr|Q9FHA9|Q9FHA9_ARATH RuBisCO subunit binding-protein beta subu...   302   1e-80
tr|A7P765|A7P765_VITVI Chromosome chr9 scaffold_7, whole genome ...   301   2e-80
tr|A7P0B1|A7P0B1_VITVI Chromosome chr6 scaffold_3, whole genome ...   292   1e-77
tr|A9RLL2|A9RLL2_PHYPA Predicted protein OS=Physcomitrella paten...   291   2e-77
tr|A9TNZ2|A9TNZ2_PHYPA Predicted protein OS=Physcomitrella paten...   291   3e-77
tr|A9RKJ5|A9RKJ5_PHYPA Predicted protein OS=Physcomitrella paten...   280   7e-74
tr|B6THN2|B6THN2_MAIZE RuBisCO large subunit-binding protein sub...   275   1e-72
tr|B6SH83|B6SH83_MAIZE RuBisCO large subunit-binding protein sub...   273   7e-72
tr|Q56ZP2|Q56ZP2_ARATH RuBisCO subunit binding-protein beta subu...   272   2e-71
tr|A4S076|A4S076_OSTLU Chaperonin 60 beta chain, chloroplast OS=...   262   1e-68
tr|Q015D7|Q015D7_OSTTA RUBISCO SUBUNIT BINDING-PROTEIN BETA-2 SU...   251   4e-65
tr|A7PNB9|A7PNB9_VITVI Chromosome chr1 scaffold_22, whole genome...   249   1e-64
tr|A8ITH8|A8ITH8_CHLRE Chaperonin 60B2 OS=Chlamydomonas reinhard...   238   3e-61
tr|Q9C667|Q9C667_ARATH Chaperonin, putative OS=Arabidopsis thali...   230   7e-59
tr|Q56XN6|Q56XN6_ARATH Chaperonin OS=Arabidopsis thaliana GN=At1...   230   7e-59
tr|B8BJN0|B8BJN0_ORYSI Putative uncharacterized protein OS=Oryza...   222   1e-56
tr|A8JE91|A8JE91_CHLRE Chaperonin 60B1 OS=Chlamydomonas reinhard...   222   1e-56
tr|A3AU66|A3AU66_ORYSJ Putative uncharacterized protein OS=Oryza...   222   1e-56

>tr|Q6B7Q9|Q6B7Q9_MAIZE RuBisCo subunit binding-protein beta subunit
           (Fragment) OS=Zea mays PE=2 SV=1
          Length = 409

 Score =  315 bits (807), Expect = 2e-84
 Identities = 163/192 (84%), Positives = 174/192 (90%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQ+YEKEKLNERIAKL+GGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 219 AEQEYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 278

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLAAKV+ +K  LEN+EQKVGA+IV+RALSYPLKLIAKNAGVNGSVV EKVLSND
Sbjct: 279 GCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLSND 338

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           +FK+GYNAATG+YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD VVVDIKEPE A P
Sbjct: 339 NFKYGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPE-ATP 397

Query: 542 VGNPMDNSGYGY 577
           V NPMDNSGYGY
Sbjct: 398 VANPMDNSGYGY 409


>tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subsp.
           japonica GN=P0541H01.20 PE=2 SV=1
          Length = 601

 Score =  311 bits (798), Expect = 2e-83
 Identities = 162/192 (84%), Positives = 174/192 (90%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQ+YEKEKLNERIAKL+GGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 411 AEQEYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 470

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLAA+V+ +K  LEN+EQKVGA+IV+RALSYPLKLIAKNAGVNGSVV EKVLSND
Sbjct: 471 GCTLLRLAARVDAIKDNLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLSND 530

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           +FKFGYNAATG+YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD VVV+IKEPE  AP
Sbjct: 531 NFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPE-PAP 589

Query: 542 VGNPMDNSGYGY 577
           V NPMDNSGYGY
Sbjct: 590 VTNPMDNSGYGY 601


>tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_019078 PE=3 SV=1
          Length = 609

 Score =  311 bits (798), Expect = 2e-83
 Identities = 162/192 (84%), Positives = 174/192 (90%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQ+YEKEKLNERIAKL+GGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 419 AEQEYEKEKLNERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 478

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLAA+V+ +K  LEN+EQKVGA+IV+RALSYPLKLIAKNAGVNGSVV EKVLSND
Sbjct: 479 GCTLLRLAARVDAIKDNLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLSND 538

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           +FKFGYNAATG+YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD VVV+IKEPE  AP
Sbjct: 539 NFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPE-PAP 597

Query: 542 VGNPMDNSGYGY 577
           V NPMDNSGYGY
Sbjct: 598 VTNPMDNSGYGY 609


>tr|P93570|P93570_SOLTU Chaperonin-60 beta subunit OS=Solanum
           tuberosum PE=2 SV=1
          Length = 599

 Score =  308 bits (788), Expect = 3e-82
 Identities = 161/192 (83%), Positives = 170/192 (88%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           A+QDYEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 409 ADQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 468

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLAAKV+ +K  L N+E+KVGADIV+RALSYPLKLIAKNAGVNGSVV EKVLS+D
Sbjct: 469 GCTLLRLAAKVDAIKGTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSD 528

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           D KFGYNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD VVV+IKEPE AA 
Sbjct: 529 DPKFGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPE-AAV 587

Query: 542 VGNPMDNSGYGY 577
            GNPMDNSGYGY
Sbjct: 588 AGNPMDNSGYGY 599


>tr|Q9LJE4|Q9LJE4_ARATH GloEL protein; chaperonin, 60 kDa
           OS=Arabidopsis thaliana GN=At3g13470 PE=3 SV=1
          Length = 596

 Score =  307 bits (787), Expect = 3e-82
 Identities = 159/192 (82%), Positives = 170/192 (88%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQDYEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 406 AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 465

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +K  LEN+E+KVGA+IV+RALSYPLKLIAKNAGVNGSVV EKVL+ND
Sbjct: 466 GCTLLRLASKVDAIKDTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLAND 525

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           + KFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFL SD VVV+I EPE   P
Sbjct: 526 NVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPE-PVP 584

Query: 542 VGNPMDNSGYGY 577
            GNPMDNSGYGY
Sbjct: 585 AGNPMDNSGYGY 596


>tr|A9PF58|A9PF58_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 607

 Score =  305 bits (782), Expect = 1e-81
 Identities = 158/192 (82%), Positives = 171/192 (89%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQDYEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 417 AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 476

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +K  LEN+E+KVGADIV+RALSYPLKLIAKNAGVNGSVV EKVL++D
Sbjct: 477 GCTLLRLASKVDAIKDSLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLASD 536

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           + KFGYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFL SD VVV+IKEPE + P
Sbjct: 537 NPKFGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-SVP 595

Query: 542 VGNPMDNSGYGY 577
            GNPMDNSGYGY
Sbjct: 596 AGNPMDNSGYGY 607


>tr|Q6ZFJ9|Q6ZFJ9_ORYSJ Os02g0102900 protein OS=Oryza sativa subsp.
           japonica GN=OJ1435_F07.26 PE=1 SV=1
          Length = 598

 Score =  305 bits (781), Expect = 2e-81
 Identities = 155/192 (80%), Positives = 172/192 (89%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQ+YEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 407 AEQEYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 466

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +   LEN+EQKVGA+IV+++LSYPLKLIAKNAGVNGSVV EKVL+ND
Sbjct: 467 GCTLLRLASKVDAIIETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLAND 526

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           +F++GYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTF+TSDAVVVDIKEPE AA 
Sbjct: 527 NFRYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKEPEKAAA 586

Query: 542 VGNPMDNSGYGY 577
            GNPM  SG+G+
Sbjct: 587 AGNPMGGSGFGF 598


>tr|Q0WRG9|Q0WRG9_ARATH RuBisCO subunit binding-protein beta subunit
           OS=Arabidopsis thaliana GN=At5g56500 PE=2 SV=1
          Length = 597

 Score =  305 bits (781), Expect = 2e-81
 Identities = 157/192 (81%), Positives = 170/192 (88%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQDYEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 406 AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 465

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +K  L N+E+KVGADIV++ALSYPLKLIAKNAGVNGSVV EKVLS+D
Sbjct: 466 GCTLLRLASKVDAIKETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSD 525

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           + K GYNAATGKYEDLMAA IIDPTKVVRCCLEHA+SVAKTFL SD VVV+IKEPE AAP
Sbjct: 526 NPKHGYNAATGKYEDLMAARIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAAP 585

Query: 542 VGNPMDNSGYGY 577
            GNPMDNSGYG+
Sbjct: 586 AGNPMDNSGYGF 597


>tr|B8AGV6|B8AGV6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05469 PE=4 SV=1
          Length = 598

 Score =  305 bits (781), Expect = 2e-81
 Identities = 155/192 (80%), Positives = 172/192 (89%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQ+YEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 407 AEQEYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 466

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            CTLLRLA+KV+ +   LEN+EQKVGA+IV+++LSYPLKLIAKNAGVNGSVV EKVL+ND
Sbjct: 467 GCTLLRLASKVDAIIETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLAND 526

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           +F++GYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTF+TSDAVVVDIKEPE AA 
Sbjct: 527 NFRYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKEPEKAAA 586

Query: 542 VGNPMDNSGYGY 577
            GNPM  SG+G+
Sbjct: 587 AGNPMGGSGFGF 598


>tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 617

 Score =  305 bits (781), Expect = 2e-81
 Identities = 161/192 (83%), Positives = 170/192 (88%)
 Frame = +2

Query: 2   AEQDYEKEKLNERIAKLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXX 181
           AEQDYEKEKLNERIAKLSGGVA+IQVGAQTETELKEKKLRVEDALNATKAA         
Sbjct: 427 AEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGG 486

Query: 182 XCTLLRLAAKVEGVKAILENNEQKVGADIVQRALSYPLKLIAKNAGVNGSVVEEKVLSND 361
            C LLRLA+KV+ ++  LEN+EQKVGA IV+RALSYPLKLIAKNAGVNGSVV EKVLS+D
Sbjct: 487 GCALLRLASKVDAIRDTLENDEQKVGAGIVKRALSYPLKLIAKNAGVNGSVVVEKVLSSD 546

Query: 362 DFKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAP 541
           D K+GYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSD VVVDIKEPE AA 
Sbjct: 547 DPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPEPAAS 606

Query: 542 VGNPMDNSGYGY 577
             NPMDNSGYGY
Sbjct: 607 -PNPMDNSGYGY 617