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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951690
Clone id TST38A01NGRL0012_B05
Library
Length 677
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_B05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TGCCTCCCTCAGCGTCTCCCTGCCTGTGGCCGCCATGGCTCAATCTGCCCTTCTCTCCCG
CTCCTCAGCGCTCGCTTCCTCCTTCGCCAATTTCCAGGCAGGCTCCCGTATTGCAGCGTC
GCAGGCCGGCGGCCTCTCCTTCGCTCCCCTGCATTCCTCCAGGGTTTTCCAGTCCTCTCC
CTTGAAGACAGTTGCCCTCTTTGGCACCAAGACTCCCAAGAAGACAACTGGGTCCAAGCC
TGCCCCAAAGACGAAGGGAAAGGTTGAGGATGGCATTTTCGGGACCTCCGGTGGAATTGG
CTTCACCAAGCAAAACGAGCTCTTTGTTGGCCGAGTCGCCATGCTTGGGTTTGCGGCCTC
TATTCTAGGTGAGGCCATCACAGGAAAGGGAACTCTTGCTCAATTCGACTTCGAGACAGG
GTTGCCACTAACTGAGACAGAGCCCCTTCTCCTCTTCTTCATTTTGTTTACATTGCTGGG
TGCTATTGGAGCTCTTGGTGACCGAGGAAAGTTTGTGGATGATCCTGCCGAGCCCACTGG
GCTTGACAGGGCTGTGATTGCTCCCGGCAAGGGTGTGAAGTCAGCTCTCGGTCTGAAAGA
GGGAGGGCCAACCTTTGGATTCACAAAGTCAAATGAGTTGTTTGTGGGCAGAATGGCCCA
ATTGGGTATTGCTTTCT
■■Homology search results ■■ -
sp_hit_id P54773
Definition sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum
Align length 138
Score (bit) 160.0
E-value 4.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951690|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_B05, 5'
         (677 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplasti...   160   4e-39
sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplasti...   159   1e-38
sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplasti...   157   4e-38
sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplasti...   152   1e-36
sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplasti...   152   2e-36
sp|O64647|TCP9_ARATH Transcription factor TCP9 OS=Arabidopsis th...    38   0.043
sp|Q9HEC9|SEC16_NEUCR COPII coat assembly protein sec-16 OS=Neur...    37   0.074
sp|O43711|TLX3_HUMAN T-cell leukemia homeobox protein 3 OS=Homo ...    37   0.096
sp|O55144|TLX3_MOUSE T-cell leukemia homeobox protein 3 OS=Mus m...    37   0.13 
sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2    37   0.13 
sp|P51532|SMCA4_HUMAN Probable global transcription activator SN...    37   0.13 
sp|Q9UBW5|BIN2_HUMAN Bridging integrator 2 OS=Homo sapiens GN=BI...    37   0.13 
sp|O42854|YFHH_SCHPO SH3 domain-containing protein C23A1.17 OS=S...    36   0.16 
sp|P37370|VRP1_YEAST Verprolin OS=Saccharomyces cerevisiae GN=VR...    36   0.16 
sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp....    36   0.16 
sp|Q9D219|BCL9_MOUSE B-cell CLL/lymphoma 9 protein OS=Mus muscul...    36   0.16 
sp|Q9ET54|PALLD_MOUSE Palladin OS=Mus musculus GN=Palld PE=1 SV=2      36   0.21 
sp|P48367|YCF17_CYAPA Uncharacterized protein ycf17 OS=Cyanophor...    35   0.28 
sp|O88703|HCN2_MOUSE Potassium/sodium hyperpolarization-activate...    35   0.28 
sp|Q4WHP3|STE20_ASPFU Serine/threonine-protein kinase ste20 OS=A...    35   0.36 
sp|Q01W31|IF2_SOLUE Translation initiation factor IF-2 OS=Soliba...    35   0.36 
sp|Q14244|MAP7_HUMAN Ensconsin OS=Homo sapiens GN=MAP7 PE=1 SV=1       35   0.48 
sp|O14776|TCRG1_HUMAN Transcription elongation regulator 1 OS=Ho...    34   0.62 
sp|Q6DGN6|SPT2_DANRE Protein SPT2 homolog OS=Danio rerio GN=spty...    34   0.62 
sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=...    34   0.62 
sp|Q9JKA9|HCN2_RAT Potassium/sodium hyperpolarization-activated ...    34   0.62 
sp|Q6ZCX3|FH6_ORYSJ Formin-like protein 6 OS=Oryza sativa subsp....    34   0.62 
sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan protein 19 OS=...    34   0.62 
sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE...    34   0.81 
sp|Q8TB24|RIN3_HUMAN Ras and Rab interactor 3 OS=Homo sapiens GN...    34   0.81 

>sp|P54773|PSBS_SOLLC Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum lycopersicum GN=PSBS PE=3 SV=1
          Length = 276

 Score =  160 bits (406), Expect = 4e-39
 Identities = 86/138 (62%), Positives = 93/138 (67%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKFVDDP  PTGL++AVI PGK  KSALGL EGGP FGF
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPTPPTGLEKAVIPPGKSFKSALGLSEGGPLFGF 201

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 202 TKANELFVGRLAQLGIAF 219



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9SMB4|PSBS_TOBAC Photosystem II 22 kDa protein, chloroplastic
           OS=Nicotiana tabacum GN=PSBS PE=2 SV=1
          Length = 274

 Score =  159 bits (403), Expect = 1e-38
 Identities = 86/138 (62%), Positives = 93/138 (67%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGAL DRGKF+DDPA PTGLD+AVI PGKG KSALGL EGGP F F
Sbjct: 140 PLLLFFILFNLLGAIGALEDRGKFIDDPAPPTGLDKAVIPPGKGFKSALGLSEGGPLFEF 199

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 200 TKANELFVGRLAQLGIAF 217



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>sp|Q9FPP4|PSBS_SOLSG Photosystem II 22 kDa protein, chloroplastic
           OS=Solanum sogarandinum GN=PSBS PE=2 SV=1
          Length = 276

 Score =  157 bits (398), Expect = 4e-38
 Identities = 84/138 (60%), Positives = 93/138 (67%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRG+F+DDPA  TGL++AVI PGK  KSALGL EGGP FGF
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGRFIDDPAPATGLEKAVIPPGKSFKSALGLSEGGPLFGF 201

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 202 TKANELFVGRLAQLGIAF 219



 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>sp|Q9XF91|PSBS_ARATH Photosystem II 22 kDa protein, chloroplastic
           OS=Arabidopsis thaliana GN=PSBS PE=1 SV=1
          Length = 265

 Score =  152 bits (385), Expect = 1e-36
 Identities = 84/138 (60%), Positives = 93/138 (67%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE GP FGF
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGF 189

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 190 TKANELFVGRLAQLGIAF 207



 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224


>sp|Q02060|PSBS_SPIOL Photosystem II 22 kDa protein, chloroplastic
           OS=Spinacia oleracea GN=PSBS PE=1 SV=1
          Length = 274

 Score =  152 bits (383), Expect = 2e-36
 Identities = 92/186 (49%), Positives = 106/186 (56%)
 Frame = +2

Query: 119 SQAGGLSFAPLHSSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXX 298
           S    L F+PL SS    S+  KT+ALF                    VED         
Sbjct: 37  SSTSNLFFSPLPSSSSSSSTVFKTLALFKSKAKAPKKVEKPKLK----VEDGLFGTSGGI 92

Query: 299 XXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXX 478
              K+NELFVGRVAM+GFAAS+LGE ITGKG L+Q +                       
Sbjct: 93  GFTKENELFVGRVAMIGFAASLLGEGITGKGILSQLNLETGIPIYEAEPLLLFFILFTLL 152

Query: 479 XAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGFTKSNELFVGRMA 658
            AIGALGDRG+FVD+P   TGL++AVI PGK V+SALGLK  GP FGFTKSNELFVGR+A
Sbjct: 153 GAIGALGDRGRFVDEPT--TGLEKAVIPPGKDVRSALGLKTKGPLFGFTKSNELFVGRLA 210

Query: 659 QLGIAF 676
           QLG AF
Sbjct: 211 QLGFAF 216



 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 24/34 (70%), Positives = 28/34 (82%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LGFA S++GE ITGKG LAQ +
Sbjct: 200 KSNELFVGRLAQLGFAFSLIGEIITGKGALAQLN 233


>sp|O64647|TCP9_ARATH Transcription factor TCP9 OS=Arabidopsis
           thaliana GN=TCP9 PE=2 SV=1
          Length = 356

 Score = 38.1 bits (87), Expect = 0.043
 Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 3/119 (2%)
 Frame = -3

Query: 672 AIPNWAILPTNNSFDFVNPKVGPPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPR 493
           AIP+ A++PT  +F F+ P++  PS +P+      P A  + SS V +   ++   R P 
Sbjct: 222 AIPSNAMIPTVGAF-FLIPQIAGPSNQPQ--LLAFPAAAASPSSYVAAVQQASTMARPPP 278

Query: 492 APIAPSNVNKMKKRRRGSVSVSGNPVSKSN*AR---VPFPVMASPRIEAANPSMATRPT 325
             + PS+         G VSVS   VS SN +R   V  P  +S     ++ S+AT  T
Sbjct: 279 LQVVPSS---------GFVSVS--DVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTT 326


>sp|Q9HEC9|SEC16_NEUCR COPII coat assembly protein sec-16
            OS=Neurospora crassa GN=sec-16 PE=3 SV=1
          Length = 2084

 Score = 37.4 bits (85), Expect = 0.074
 Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
 Frame = -3

Query: 618  PKVGPPSFRPRADFTPLPGAITALSS-PVGSAGSSTNFPR-------SPRAPIAPSNVNK 463
            P  GPPS    A   P+PG  +A+ S P  S       P        +P A I PS  + 
Sbjct: 724  PPAGPPSI---ASQPPVPGMPSAMGSVPNSSFTQHAEVPNLVAPPRVNPYASIQPSTTSL 780

Query: 462  MKKRRRGSVSVSGNPVSKSN*ARVPFPVMASPRIEAANPSMATRPTKSSFCLVKPIPPEV 283
                   + S      S  +    P P  A+ R   A P  A+RPT S +     +PP +
Sbjct: 781  APAVPAPASSRYSPAPSSGSQLSTPVPPAAASRYSPAPP--ASRPTSSGYTPTTSVPPVL 838

Query: 282  P 280
            P
Sbjct: 839  P 839


>sp|O43711|TLX3_HUMAN T-cell leukemia homeobox protein 3 OS=Homo
           sapiens GN=TLX3 PE=1 SV=3
          Length = 291

 Score = 37.0 bits (84), Expect = 0.096
 Identities = 28/98 (28%), Positives = 39/98 (39%)
 Frame = -3

Query: 609 GPPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSVSV 430
           GPP  RP A +  LP +   L +P   AGS      S    +AP+ V ++   R      
Sbjct: 46  GPPGGRPGATYPSLPASFAGLGAPFEDAGS-----YSVNLSLAPAGVIRVPAHR------ 94

Query: 429 SGNPVSKSN*ARVPFPVMASPRIEAANPSMATRPTKSS 316
                        P P    P + +A P+M + PT SS
Sbjct: 95  -------------PLPGAVPPPLPSALPAMPSVPTVSS 119


>sp|O55144|TLX3_MOUSE T-cell leukemia homeobox protein 3 OS=Mus
           musculus GN=Tlx3 PE=2 SV=1
          Length = 291

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 28/98 (28%), Positives = 39/98 (39%)
 Frame = -3

Query: 609 GPPSFRPRADFTPLPGAITALSSPVGSAGSSTNFPRSPRAPIAPSNVNKMKKRRRGSVSV 430
           GPP  RP A +  LP +   L +P   AGS      S    +AP+ V ++   R      
Sbjct: 46  GPPGGRPGAAYPSLPASFAGLGAPFEDAGS-----YSVNLSLAPAGVIRVPAHR------ 94

Query: 429 SGNPVSKSN*ARVPFPVMASPRIEAANPSMATRPTKSS 316
                        P P    P + +A P+M + PT SS
Sbjct: 95  -------------PLPGAVPPPLPSALPAMPSVPTVSS 119


>sp|Q76KD6|SPERI_HUMAN Speriolin OS=Homo sapiens GN=SPATC1 PE=2 SV=2
          Length = 591

 Score = 36.6 bits (83), Expect = 0.13
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
 Frame = -3

Query: 603 PSFRPRADFTPLPGAI-TALSSPVGSAGSS--TNFPRSPRA-PIAPSNVNKMKKRRRGSV 436
           PS  P +  +PL G + T LS P  ++ SS  T+F  SP A P+  +  + +     G++
Sbjct: 106 PSATPGSLMSPLTGTLSTLLSGPAPTSQSSPLTSFLTSPIAGPLTGTLASSLGLPSTGTL 165

Query: 435 ---SVSGNPVSKSN*ARVPFPVMASPRIEAANP---SMATRPTKSSFCLVKP----IPPE 286
              S+   PV+ S  + +  PVM +  +  ++P   S AT P  S   L  P    + PE
Sbjct: 166 TPSSLVAGPVAMSQSSPLIAPVMGTVAVSLSSPLLSSTATPPGVSQNLLANPMSNLVLPE 225

Query: 285 VPKM 274
            P++
Sbjct: 226 APRL 229
tr_hit_id Q2LAH0
Definition tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component OS=Nicotiana benthamiana
Align length 138
Score (bit) 164.0
E-value 5.0e-39
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951690|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_B05, 5'
         (677 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa compone...   164   5e-39
tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa compone...   161   4e-38
tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding prote...   161   4e-38
tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert seque...   156   1e-36
tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza...   156   1e-36
tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossyp...   155   2e-36
tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossyp...   155   2e-36
tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein OS=Gossyp...   154   5e-36
tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein ...   154   5e-36
tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein (At1g445...   152   1e-35
tr|Q56XH2|Q56XH2_ARATH Photosystem II chlorophyll-binding protei...   152   1e-35
tr|Q6WFB1|Q6WFB1_MAIZE Photosystem II subunit PsbS OS=Zea mays P...   152   2e-35
tr|B6TKD1|B6TKD1_MAIZE Photosystem II 22 kDa protein OS=Zea mays...   152   2e-35
tr|A7NVD7|A7NVD7_VITVI Chromosome chr18 scaffold_1, whole genome...   151   4e-35
tr|A9NK12|A9NK12_PICSI Putative uncharacterized protein OS=Picea...   150   9e-35
tr|A9PIG1|A9PIG1_POPTR Putative uncharacterized protein OS=Popul...   149   1e-34
tr|Q7XSS8|Q7XSS8_ORYSJ OSJNBa0039K24.28 protein (Putative unchar...   149   2e-34
tr|Q259V3|Q259V3_ORYSA B0518A01.1 protein (H0814G11.22 protein) ...   149   2e-34
tr|Q0J8R9|Q0J8R9_ORYSJ Os04g0690800 protein OS=Oryza sativa subs...   149   2e-34
tr|A2XZ94|A2XZ94_ORYSI Putative uncharacterized protein OS=Oryza...   149   2e-34
tr|Q40716|Q40716_ORYSJ 22 kDa protein of photosystem II OS=Oryza...   146   1e-33
tr|Q2VL34|Q2VL34_9LILI PSII subunit PsbS (Fragment) OS=Xerophyta...   145   2e-33
tr|Q1EMP1|Q1EMP1_PLAMJ Photosystem II, 22 kDa Protein OS=Plantag...   145   2e-33
tr|B7FJ53|B7FJ53_MEDTR Putative uncharacterized protein (Fragmen...   145   3e-33
tr|A9NYQ2|A9NYQ2_PICSI Putative uncharacterized protein OS=Picea...   137   6e-31
tr|Q3ECX1|Q3ECX1_ARATH Uncharacterized protein At1g44575.2 OS=Ar...   112   3e-23
tr|A4QPL3|A4QPL3_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    76   2e-12
tr|A4QPL4|A4QPL4_ACEAT Chloroplast photosystem II 22 kDa PsbS pr...    75   3e-12
tr|A8HPM5|A8HPM5_CHLRE Chloroplast photosystem II-associated 22 ...    72   4e-11
tr|A8HPM2|A8HPM2_CHLRE Chloroplast photosystem II-associated 22 ...    72   4e-11

>tr|Q2LAH0|Q2LAH0_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS1 PE=2 SV=1
          Length = 277

 Score =  164 bits (415), Expect = 5e-39
 Identities = 87/138 (63%), Positives = 94/138 (68%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 83  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 142

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKF+DDP  PTGLD+AVI PGKG KSALGL EGGP FGF
Sbjct: 143 PLLLFFILFNLLGAIGALGDRGKFIDDPTPPTGLDKAVIPPGKGFKSALGLSEGGPLFGF 202

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 203 TKANELFVGRLAQLGIAF 220



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 237


>tr|Q2LAH1|Q2LAH1_NICBE Chloroplast photosystem II 22 kDa component
           OS=Nicotiana benthamiana GN=psbS2 PE=4 SV=1
          Length = 274

 Score =  161 bits (407), Expect = 4e-38
 Identities = 86/138 (62%), Positives = 93/138 (67%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 80  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 139

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKF+DDP   TGLD+AVI PGKG KSALGL EGGP FGF
Sbjct: 140 PLLLFFILFNLLGAIGALGDRGKFIDDPVPATGLDKAVIPPGKGFKSALGLSEGGPLFGF 199

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 200 TKANELFVGRLAQLGIAF 217



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 201 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 234


>tr|B3RFS0|B3RFS0_SOLNI Chloroplast chlorophyll a/b-binding protein
           (Fragment) OS=Solanum nigrum GN=PsbS PE=4 SV=1
          Length = 268

 Score =  161 bits (407), Expect = 4e-38
 Identities = 86/138 (62%), Positives = 94/138 (68%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 82  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 141

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKFVDDPA PTGL++AVI PG+  KSALGL EGGP FGF
Sbjct: 142 PLLLFFILFNLLGAIGALGDRGKFVDDPAPPTGLEKAVIPPGRSFKSALGLSEGGPLFGF 201

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 202 TKANELFVGRLAQLGIAF 219



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 203 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 236


>tr|Q943K1|Q943K1_ORYSJ cDNA clone:001-002-B11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0039A07.6 PE=2 SV=1
          Length = 268

 Score =  156 bits (394), Expect = 1e-36
 Identities = 93/174 (53%), Positives = 103/174 (59%)
 Frame = +2

Query: 155 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 334
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 335 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 514
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 515 VDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGFTKSNELFVGRMAQLGIAF 676
           VDD    TGLD+AVIAPGKG +SALGL EGGP FGFTK+NELFVGR+AQLGIAF
Sbjct: 159 VDDQPV-TGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAF 211



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A2WXD9|A2WXD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04589 PE=4 SV=1
          Length = 268

 Score =  156 bits (394), Expect = 1e-36
 Identities = 93/174 (53%), Positives = 103/174 (59%)
 Frame = +2

Query: 155 SSRVFQSSPLKTVALFXXXXXXXXXXXXXXXXXXXXVEDXXXXXXXXXXXXKQNELFVGR 334
           SS + ++  +KTVALF                     ED            K+NELFVGR
Sbjct: 39  SSSLGRAVSVKTVALFGRSKTKAAPARKAEPKPKFKTEDGIFGTSGGIGFTKENELFVGR 98

Query: 335 VAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAIGALGDRGKF 514
           VAMLGFAASILGEAITGKG LAQ +                        AIGALGDRG F
Sbjct: 99  VAMLGFAASILGEAITGKGILAQLNLETGIPIYEAEPLLLFFILFTLLGAIGALGDRGSF 158

Query: 515 VDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGFTKSNELFVGRMAQLGIAF 676
           VDD    TGLD+AVIAPGKG +SALGL EGGP FGFTK+NELFVGR+AQLGIAF
Sbjct: 159 VDDQPV-TGLDKAVIAPGKGFRSALGLSEGGPLFGFTKANELFVGRLAQLGIAF 211



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A SI+GE ITGKG LAQ +
Sbjct: 195 KANELFVGRLAQLGIAFSIIGEIITGKGALAQLN 228


>tr|A4L9I5|A4L9I5_GOSHI Putative photosystem II protein OS=Gossypium
           hirsutum PE=4 SV=1
          Length = 278

 Score =  155 bits (392), Expect = 2e-36
 Identities = 84/138 (60%), Positives = 94/138 (68%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGGP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGGPLFGF 202

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 203 TKANELFVGRLAQLGIAF 220



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 32/75 (42%), Positives = 36/75 (48%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAI 487
           K NELFVGR+A LG A S++GE ITGKG LAQ +                        AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 488 GALGDRGKFVDDPAE 532
                 GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|A4L9G7|A4L9G7_GOSRA Putative photosystem II protein OS=Gossypium
           raimondii PE=4 SV=1
          Length = 278

 Score =  155 bits (392), Expect = 2e-36
 Identities = 84/138 (60%), Positives = 94/138 (68%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKFVD+P  PTG++ AVI PGKG++ ALGLKEGGP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDEP--PTGIEGAVIPPGKGIRGALGLKEGGPLFGF 202

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 203 TKANELFVGRLAQLGIAF 220



 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 32/75 (42%), Positives = 36/75 (48%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXXXXXXXXXXXXXXXAI 487
           K NELFVGR+A LG A S++GE ITGKG LAQ +                        AI
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLNIETGIPISDIEPLVLFNVAFFFFAAI 263

Query: 488 GALGDRGKFVDDPAE 532
                 GKFV D AE
Sbjct: 264 NP--GTGKFVTDEAE 276


>tr|B2ZAP6|B2ZAP6_9ROSI Putative photosystem II protein
           OS=Gossypioides kirkii PE=4 SV=1
          Length = 277

 Score =  154 bits (389), Expect = 5e-36
 Identities = 84/138 (60%), Positives = 94/138 (68%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            KQNELFVGRVAM+GFAAS+LGEAITGKG LAQ +           
Sbjct: 85  VEDGIFGTSGGIGFTKQNELFVGRVAMIGFAASLLGEAITGKGILAQLNLETGIPIYEAE 144

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRG+FVD+P  PTG++ AVI PGKGV+ ALGLKEGGP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGRFVDEP--PTGVEGAVIPPGKGVRGALGLKEGGPLFGF 202

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 203 TKANELFVGRLAQLGIAF 220



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 204 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 237


>tr|A9TJ15|A9TJ15_PHYPA Photosystem II 22kDa chloroplast protein
           OS=Physcomitrella patens subsp. patens GN=PSBS PE=4 SV=1
          Length = 279

 Score =  154 bits (389), Expect = 5e-36
 Identities = 87/138 (63%), Positives = 90/138 (65%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            K NELFVGRVAMLGFAASILGEA+TGKGTLAQFD           
Sbjct: 85  VEDGIFGTSGGIGFTKANELFVGRVAMLGFAASILGEALTGKGTLAQFDIETGIPLTETE 144

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKFVDD A   GLD  +I PGKGVK ALGL E GP FGF
Sbjct: 145 PLLLFFILFTLLGAIGALGDRGKFVDD-APVAGLDSTIIKPGKGVKGALGLNEKGPVFGF 203

Query: 623 TKSNELFVGRMAQLGIAF 676
           TKSNELFVGR+AQLGIAF
Sbjct: 204 TKSNELFVGRLAQLGIAF 221



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A +I+GE ITGKG LAQ +
Sbjct: 205 KSNELFVGRLAQLGIAFAIIGEIITGKGALAQLN 238


>tr|Q94EI1|Q94EI1_ARATH Putative uncharacterized protein
           (At1g44575/T18F15) OS=Arabidopsis thaliana PE=2 SV=1
          Length = 265

 Score =  152 bits (385), Expect = 1e-35
 Identities = 84/138 (60%), Positives = 93/138 (67%)
 Frame = +2

Query: 263 VEDXXXXXXXXXXXXKQNELFVGRVAMLGFAASILGEAITGKGTLAQFDXXXXXXXXXXX 442
           VED            K NELFVGRVAM+GFAAS+LGEA+TGKG LAQ +           
Sbjct: 72  VEDGIFGTSGGIGFTKANELFVGRVAMIGFAASLLGEALTGKGILAQLNLETGIPIYEAE 131

Query: 443 XXXXXXXXXXXXXAIGALGDRGKFVDDPAEPTGLDRAVIAPGKGVKSALGLKEGGPTFGF 622
                        AIGALGDRGKFVDDP  PTGL++AVI PGK V+SALGLKE GP FGF
Sbjct: 132 PLLLFFILFTLLGAIGALGDRGKFVDDP--PTGLEKAVIPPGKNVRSALGLKEQGPLFGF 189

Query: 623 TKSNELFVGRMAQLGIAF 676
           TK+NELFVGR+AQLGIAF
Sbjct: 190 TKANELFVGRLAQLGIAF 207



 Score = 48.9 bits (115), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 308 KQNELFVGRVAMLGFAASILGEAITGKGTLAQFD 409
           K NELFVGR+A LG A S++GE ITGKG LAQ +
Sbjct: 191 KANELFVGRLAQLGIAFSLIGEIITGKGALAQLN 224