| DK951701 |
| Clone id |
TST38A01NGRL0012_B17 |
| Library |
TST38 |
| Length |
540 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_B17. 5' end sequence. |
| Accession |
DK951701 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL1886Contig1 |
| Sequence |
AGAATTAAAGAATCCTGTTTTCATCAATTCTGGATAAATCCCAACTATTCTTGATGCGTT CAAGGCAATCTCAATAGTTGGGATTTATCCAGAATTAAAGAATCCTGTTTTCATCAATGA GCATGTCACATGGGCAGATGGGAAAAAGTATGAGGATGTTTTTGCAGAGACGCTGCTCAA GTATGGATACCAGGGGAAATTCCTCTCTGAGCAGTGGAAGGCAAAGCCCATTTTTATACA GTCATTTGCTCCAACGTCACTCATCTATGTGTCTAATCTGACTGATTCTCCCAAGATTCT TCTCATTGATGATGTTGATATTCCTACCCAAGATACAAACCAGTCATTTTGGGAGATCAC CTCTGAAGCATACCTTAACTACATCAAGGAGTATGTTGTGGGGATTGGACCTTGGAAAGA CACACTAGTGCCCCCTGACACAATGAACCATTTGAAGAATTCAACTCATTTGGTGCATAG GGCTCACTCCCATGGTTTGCAGGTGCATCCATATACTTTCAGGAATGAAAACCAGTTCTT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P09394 |
| Definition |
sp|P09394|GLPQ_ECOLI Glycerophosphoryl diester phosphodiesterase OS=Escherichia coli (strain K12) |
| Align length |
165 |
| Score (bit) |
51.6 |
| E-value |
2.0e-06 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B8LKP2 |
| Definition |
tr|B8LKP2|B8LKP2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
| Align length |
161 |
| Score (bit) |
249.0 |
| E-value |
6.0e-65 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951701|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_B17, 5' (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKP2|B8LKP2_PICSI Putative uncharacterized protein OS=Picea... 249 6e-65 tr|A9PFJ5|A9PFJ5_POPTR Putative uncharacterized protein OS=Popul... 243 6e-63 tr|B6TLZ9|B6TLZ9_MAIZE Glycerophosphoryl diester phosphodiestera... 239 7e-62 tr|Q6AUZ6|Q6AUZ6_ORYSJ Os03g0603600 protein OS=Oryza sativa subs... 238 2e-61 tr|A7PD94|A7PD94_VITVI Chromosome chr17 scaffold_12, whole genom... 236 6e-61 tr|A9RVT6|A9RVT6_PHYPA Predicted protein OS=Physcomitrella paten... 232 8e-60 tr|Q9SD81|Q9SD81_ARATH Glycerophosphodiester phosphodiesterase-l... 232 1e-59 tr|Q9C907|Q9C907_ARATH Putative glycerophosphodiester phosphodie... 231 2e-59 tr|Q8LR39|Q8LR39_ORYSJ cDNA clone:006-311-E04, full insert seque... 227 3e-58 tr|B8A9U7|B8A9U7_ORYSI Putative uncharacterized protein OS=Oryza... 227 3e-58 tr|A2ZY41|A2ZY41_ORYSJ Putative uncharacterized protein OS=Oryza... 227 3e-58 tr|A8CF52|A8CF52_BRACM Glycerophosphodiester phosphodiesterase O... 227 3e-58 tr|B4FNF6|B4FNF6_MAIZE Putative uncharacterized protein OS=Zea m... 223 5e-57 tr|Q6YVY7|Q6YVY7_ORYSJ Os07g0602800 protein OS=Oryza sativa subs... 219 5e-56 tr|Q5PYQ3|Q5PYQ3_MANES Glycerophosphodiester phosphodiesterase-l... 187 4e-46 tr|A3BLX8|A3BLX8_ORYSJ Putative uncharacterized protein OS=Oryza... 179 8e-44 tr|A2YNG3|A2YNG3_ORYSI Putative uncharacterized protein OS=Oryza... 179 8e-44 tr|A8IQK6|A8IQK6_CHLRE Glycerophosphoryl diester phosphodiestera... 103 7e-21 tr|A8IS69|A8IS69_CHLRE Glycerophosphoryl diester phosphodiestera... 101 3e-20 tr|Q1GR04|Q1GR04_SPHAL Glycerophosphoryl diester phosphodiestera... 94 6e-18 tr|A8JH87|A8JH87_CHLRE Glycerophosphoryl diester phosphodiestera... 94 6e-18 tr|A2XJB6|A2XJB6_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17 tr|A8IS67|A8IS67_CHLRE Glycerophosphoryl diester phosphodiestera... 90 9e-17 tr|Q8CJI8|Q8CJI8_STRCO Putative glycerophosphoryl diester phosph... 87 7e-16 tr|A4VRP0|A4VRP0_PSEU5 Glycerophosphoryl diester phosphodiestera... 84 6e-15 tr|Q827Y5|Q827Y5_STRAW Putative glycerophosphoryl diester phosph... 82 2e-14 tr|B2J3N8|B2J3N8_NOSP7 Glycerophosphoryl diester phosphodiestera... 80 5e-14 tr|B4VJY0|B4VJY0_9CYAN Glycerophosphoryl diester phosphodiestera... 80 9e-14 tr|B4B2Y5|B4B2Y5_9CHRO Glycerophosphoryl diester phosphodiestera... 79 1e-13 tr|A4Y041|A4Y041_PSEMY Glycerophosphoryl diester phosphodiestera... 78 3e-13
>tr|B8LKP2|B8LKP2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 399
Score = 249 bits (636), Expect = 6e-65 Identities = 112/161 (69%), Positives = 135/161 (83%) Frame = +2
Query: 56 AFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIF 235 A A +VGIYPE+KNPVFIN+HV W GK++ED F ETLL YGY+G++LS W +PIF Sbjct: 171 ALDAPRVVGIYPEMKNPVFINQHVKWPGGKRFEDKFMETLLSYGYKGEYLSSDWLKQPIF 230
Query: 236 IQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPW 415 IQSFAPTSL+YVSN TDSPKILLIDDV +PTQDT+QS+WEITS+ Y ++IK+YVVGIGPW Sbjct: 231 IQSFAPTSLVYVSNFTDSPKILLIDDVTVPTQDTDQSYWEITSDKYFDFIKKYVVGIGPW 290
Query: 416 KDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 KDT+VPPD+ N+L T LV +AH+H LQVHPYT+RNEN F Sbjct: 291 KDTIVPPDSRNYLTTPTDLVAKAHAHDLQVHPYTYRNENVF 331
>tr|A9PFJ5|A9PFJ5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 399
Score = 243 bits (619), Expect = 6e-63 Identities = 111/161 (68%), Positives = 135/161 (83%) Frame = +2
Query: 56 AFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIF 235 A A +VGIYPE+KNP+ IN+HV W DGKK+ED F L KYGY+G ++SE W +P+F Sbjct: 171 ALDAPRVVGIYPEIKNPILINQHVKWPDGKKFEDKFVGILKKYGYRGSYMSENWLKQPLF 230
Query: 236 IQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPW 415 IQSFAPTSL+Y+SNLTDSPKI LIDDV IPTQDTNQS+WEITS+AYL+YIK+YVVGIGPW Sbjct: 231 IQSFAPTSLVYISNLTDSPKIFLIDDVTIPTQDTNQSYWEITSDAYLDYIKDYVVGIGPW 290
Query: 416 KDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 KDT+VP N+L+ ++LV RAH+H LQVHPYT+RNEN+F Sbjct: 291 KDTIVPVG-KNYLQIPSNLVARAHAHDLQVHPYTYRNENKF 330
>tr|B6TLZ9|B6TLZ9_MAIZE Glycerophosphoryl diester phosphodiesterase OS=Zea mays PE=2 SV=1 Length = 415
Score = 239 bits (610), Expect = 7e-62 Identities = 115/165 (69%), Positives = 135/165 (81%), Gaps = 1/165 (0%) Frame = +2
Query: 47 ILDAFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAK 226 IL A A VGIYPE+KNPVFIN+HV W+DGK++ED F ETLL+YGY G+++S+ W + Sbjct: 182 ILIALYADRTVGIYPEIKNPVFINQHVKWSDGKRFEDKFVETLLRYGYGGEYMSDGWLRQ 241
Query: 227 PIFIQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGI 406 P+FIQSFAPTSLIYVSN+TDSPK+LLIDD +PTQDTNQS+ EITS+AYL +I YVVGI Sbjct: 242 PLFIQSFAPTSLIYVSNMTDSPKLLLIDDTTVPTQDTNQSYHEITSDAYLAFIGSYVVGI 301
Query: 407 GPWKDTLVPPD-TMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 GPWKDTLVPPD T N L LV RAH+ LQVHPYTFRNENQ+ Sbjct: 302 GPWKDTLVPPDPTDNRLGRPADLVARAHALRLQVHPYTFRNENQY 346
>tr|Q6AUZ6|Q6AUZ6_ORYSJ Os03g0603600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0004G03.4 PE=2 SV=1 Length = 391
Score = 238 bits (606), Expect = 2e-61 Identities = 111/164 (67%), Positives = 137/164 (83%) Frame = +2
Query: 47 ILDAFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAK 226 IL A A +VGIYPELKNP+FINEHV W+DGKK+ED F +TLLKYGY+G+++SE W + Sbjct: 163 ILIALYADRVVGIYPELKNPIFINEHVKWSDGKKFEDKFVQTLLKYGYKGEYMSEDWLKQ 222
Query: 227 PIFIQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGI 406 P+FIQSFAP+SLIY+SN+T+SPKI LIDD + TQDTNQS++EITS+AYL +I++Y+VGI Sbjct: 223 PLFIQSFAPSSLIYMSNMTNSPKIFLIDDTTVRTQDTNQSYYEITSDAYLAFIRKYIVGI 282
Query: 407 GPWKDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 GPWKDT+VPP N+L T LV RAH+ LQVHPYTFRNEN F Sbjct: 283 GPWKDTIVPP-INNYLGPPTDLVARAHALNLQVHPYTFRNENMF 325
>tr|A7PD94|A7PD94_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016186001 PE=4 SV=1 Length = 417
Score = 236 bits (602), Expect = 6e-61 Identities = 108/161 (67%), Positives = 133/161 (82%) Frame = +2
Query: 56 AFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIF 235 A A +VGIYPE+KNPVFIN+ V W DGK++ED F TL KYGY+G ++SE W +P+F Sbjct: 187 ALDAPRVVGIYPEIKNPVFINQRVKWPDGKRFEDHFVATLKKYGYKGSYMSEDWLKQPVF 246
Query: 236 IQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPW 415 IQSFAPTSLIY+SN T+ PKI LIDDV +PTQDTNQS+WEITS++YL++IK+YVVGIGPW Sbjct: 247 IQSFAPTSLIYISNQTNLPKIFLIDDVTVPTQDTNQSYWEITSDSYLSFIKQYVVGIGPW 306
Query: 416 KDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 KDT+VP N+L+ T LV +AH+H LQVHPYT+RNENQF Sbjct: 307 KDTVVPV-VDNYLQTPTDLVAKAHAHDLQVHPYTYRNENQF 346
>tr|A9RVT6|A9RVT6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71055 PE=4 SV=1 Length = 332
Score = 232 bits (592), Expect = 8e-60 Identities = 105/161 (65%), Positives = 129/161 (80%) Frame = +2
Query: 56 AFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIF 235 A A IVGIYPE+K+PVF+N+HV W GK +ED+F ETLLK+ Y GKF SE WK +P+F Sbjct: 126 ALNAERIVGIYPEIKSPVFVNKHVKWPGGKTHEDIFVETLLKFNYTGKFFSEAWKKQPLF 185
Query: 236 IQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPW 415 IQSFAPTSL SNLTDSP ILL+DDV + TQDTNQ++ EITS+ YL +I +YVVG+GPW Sbjct: 186 IQSFAPTSLFRASNLTDSPLILLLDDVTVNTQDTNQTYAEITSDEYLKFISKYVVGLGPW 245
Query: 416 KDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 KDT+VPP+ N+L T L+ RAH+H LQVHPYT+RNEN+F Sbjct: 246 KDTIVPPNEKNYLATPTDLIKRAHAHNLQVHPYTYRNENKF 286
Score = 34.3 bits (77), Expect = 4.4 Identities = 16/24 (66%), Positives = 18/24 (75%) Frame = -1
Query: 75 IEIALNASRIVGIYPELMKTGFFN 4 I+IALNA RIVGIYPE+ F N Sbjct: 123 IKIALNAERIVGIYPEIKSPVFVN 146
>tr|Q9SD81|Q9SD81_ARATH Glycerophosphodiester phosphodiesterase-like protein (At5g08030) OS=Arabidopsis thaliana GN=F13G24.230 PE=2 SV=1 Length = 372
Score = 232 bits (591), Expect = 1e-59 Identities = 109/161 (67%), Positives = 131/161 (81%) Frame = +2
Query: 56 AFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIF 235 A A +VGIYPE+KNPVF+N+ V WADGKK+ED F ETL KYGY+G +LSE W +PIF Sbjct: 166 ALDAPRVVGIYPEIKNPVFMNQQVKWADGKKFEDKFVETLKKYGYKGSYLSEDWLKQPIF 225
Query: 236 IQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPW 415 IQSFA TSL+Y+SN+TDSPK+ LIDDV I T+DTN+++ EITS+AYL+YIK YV+GIGPW Sbjct: 226 IQSFAATSLVYISNMTDSPKLFLIDDVTILTEDTNKTYAEITSDAYLDYIKPYVIGIGPW 285
Query: 416 KDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 KDT+VP + N L T LV RAHS LQVHPYT+RNENQF Sbjct: 286 KDTIVPVNN-NRLMTPTDLVARAHSRNLQVHPYTYRNENQF 325
>tr|Q9C907|Q9C907_ARATH Putative glycerophosphodiester phosphodiesterase; 42559-40170 (Putative glycerophosphodiester phosphodiesterase) OS=Arabidopsis thaliana GN=At1g74210 PE=2 SV=1 Length = 392
Score = 231 bits (589), Expect = 2e-59 Identities = 105/155 (67%), Positives = 130/155 (83%) Frame = +2
Query: 74 IVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIFIQSFAP 253 +VGIYPE+KNPV +N+HV W GKK+ED ETL KYGY G +LS++W KP+FIQSFAP Sbjct: 172 VVGIYPEIKNPVLMNQHVKWPGGKKFEDKVVETLKKYGYGGSYLSKKWLKKPLFIQSFAP 231
Query: 254 TSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPWKDTLVP 433 TSL+Y+SNLTDSPK+LLIDDV +PTQDTNQ++ EITS+AY YIK+YVVGIGPWKDT+VP Sbjct: 232 TSLVYISNLTDSPKVLLIDDVTMPTQDTNQTYAEITSDAYFEYIKQYVVGIGPWKDTIVP 291
Query: 434 PDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 + N++ T LV RAH+H LQVHPYT+RNE++F Sbjct: 292 VNN-NYVLAPTDLVKRAHAHNLQVHPYTYRNEHEF 325
>tr|Q8LR39|Q8LR39_ORYSJ cDNA clone:006-311-E04, full insert sequence OS=Oryza sativa subsp. japonica GN=P0512C01.48 PE=2 SV=1 Length = 391
Score = 227 bits (579), Expect = 3e-58 Identities = 105/161 (65%), Positives = 127/161 (78%) Frame = +2
Query: 56 AFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIF 235 A A VGIYPE+K+PVFIN+HV W GKK+ED F +TLLKYGY+G+++SE W +P+F Sbjct: 166 ALDASRTVGIYPEMKDPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLF 225
Query: 236 IQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPW 415 IQSFAPTSL++ S LTDSPKI LIDD + TQDTNQS+W+ITS+ YL YI YVVG+GPW Sbjct: 226 IQSFAPTSLVHASKLTDSPKIFLIDDFSVRTQDTNQSYWDITSDDYLAYISNYVVGLGPW 285
Query: 416 KDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 KDT+VP N+ T LV RAH+H LQVHPYT+RNENQF Sbjct: 286 KDTVVPA-AKNYTMAPTDLVARAHAHNLQVHPYTYRNENQF 325
>tr|B8A9U7|B8A9U7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03844 PE=4 SV=1 Length = 540
Score = 227 bits (579), Expect = 3e-58 Identities = 105/161 (65%), Positives = 127/161 (78%) Frame = +2
Query: 56 AFKAISIVGIYPELKNPVFINEHVTWADGKKYEDVFAETLLKYGYQGKFLSEQWKAKPIF 235 A A VGIYPE+K+PVFIN+HV W GKK+ED F +TLLKYGY+G+++SE W +P+F Sbjct: 167 ALDASRTVGIYPEMKDPVFINKHVKWDGGKKFEDKFVDTLLKYGYKGQYMSENWLKQPLF 226
Query: 236 IQSFAPTSLIYVSNLTDSPKILLIDDVDIPTQDTNQSFWEITSEAYLNYIKEYVVGIGPW 415 IQSFAPTSL++ S LTDSPKI LIDD + TQDTNQS+W+ITS+ YL YI YVVG+GPW Sbjct: 227 IQSFAPTSLVHASKLTDSPKIFLIDDFSVRTQDTNQSYWDITSDDYLAYISNYVVGLGPW 286
Query: 416 KDTLVPPDTMNHLKNSTHLVHRAHSHGLQVHPYTFRNENQF 538 KDT+VP N+ T LV RAH+H LQVHPYT+RNENQF Sbjct: 287 KDTVVPA-AKNYTMAPTDLVARAHAHNLQVHPYTYRNENQF 326
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