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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951726
Clone id TST38A01NGRL0012_C18
Library
Length 652
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_C18. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GGACATGTATGCTCGTTCCTGCTACACCAAAATTTCATTCCTCCCAGCACAGGCCAAATT
TTCTTTTAGGGTGGTATCATCATCTTCACTTTGGGGAGCTCTGGTGAAACTTCGATCCCT
GCCTTTATCTGTTCGCTGCTCCAGCAGCAATGAGGCTTTCATGAACAGTGGCCATGGTGG
TGCTCATAGTGGCAACAATTGGAAGTCCAACCAGGATGACTACAAGTATCTAGAGGCTCA
AGTAGTGGAAGCAGTGAGCCTTTTACCTTCCCAAGGACATCTTTTCATGACCCTGGCTAA
TGGGGGTGAGGTGGAGGTAAATCATGTCAATCCACCCAAGGGACGACTTCTTTACAGAAC
CAGGAATCCGACAATTTTTCTAAGTCTTATGTCAGACAAGGAACTTATATTACCTATTAT
TGTAGGTGATATTGCAGTTGGAATGTTAATGAAGGCTCTTCGTGGAGAAGAAGCAACGGC
TCGTCCCAATCAGTACCATCTCATGAGAGACCTTATTTCGTCGCTAAATTTTGAGGTTCG
AATGGTCAAAGTCACAGAGAGAGTTGCCGATACTTACCTCTCGCGGATTTTTATTGGAAA
GCCTGGCGAAGAGGAGATGATGAGTGTGGATGCTAGACCTTCTGATGCTATC
■■Homology search results ■■ -
sp_hit_id Q9CBZ6
Definition sp|Q9CBZ6|NADE_MYCLE Glutamine-dependent NAD(+) synthetase OS=Mycobacterium leprae
Align length 47
Score (bit) 35.8
E-value 0.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951726|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_C18, 5'
         (652 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CBZ6|NADE_MYCLE Glutamine-dependent NAD(+) synthetase OS=My...    36   0.20 
sp|Q1MRS4|HYPA_LAWIP Probable hydrogenase nickel incorporation p...    33   1.7  
sp|Q9UDX3|S14L4_HUMAN SEC14-like protein 4 OS=Homo sapiens GN=SE...    31   6.5  

>sp|Q9CBZ6|NADE_MYCLE Glutamine-dependent NAD(+) synthetase
           OS=Mycobacterium leprae GN=nadE PE=3 SV=1
          Length = 680

 Score = 35.8 bits (81), Expect = 0.20
 Identities = 18/47 (38%), Positives = 30/47 (63%)
 Frame = +2

Query: 497 HLMRDLISSLNFEVRMVKVTERVADTYLSRIFIGKPGEEEMMSVDAR 637
           HL+R +I+S  FE ++ KV + V DT ++   I   GEE++ S +A+
Sbjct: 515 HLIRWVIASSQFEEQVDKVLQSVLDTEITPELIPSDGEEKLQSTEAK 561


>sp|Q1MRS4|HYPA_LAWIP Probable hydrogenase nickel incorporation
           protein hypA OS=Lawsonia intracellularis (strain
           PHE/MN1-00) GN=hypA PE=3 SV=1
          Length = 118

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 15/49 (30%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = +2

Query: 20  CYTKIS-FLPAQAKFSFRVVSS-SSLWGALVKLRSLPLSVRCSSSNEAF 160
           CY +++  +P   +F+F++ +  +SL GA++++  +PL +RCS+    F
Sbjct: 32  CYGELTNIVPDSLQFAFKIFTEGTSLEGAILEIEKIPLMLRCSNCLSLF 80


>sp|Q9UDX3|S14L4_HUMAN SEC14-like protein 4 OS=Homo sapiens
           GN=SEC14L4 PE=2 SV=1
          Length = 406

 Score = 30.8 bits (68), Expect = 6.5
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
 Frame = +2

Query: 302 GGEVEVNHVNPPKGRLLYR-TRNPTIFLSLMSDKELILPIIV---------GDIAVGMLM 451
           GGEV  ++    + RL Y  TR+     SL  + E++ P  V         GDI  G+ +
Sbjct: 261 GGEVPKSYYLCEQVRLQYEHTRSVGRGSSLQVENEILFPGCVLRWQFASDGGDIGFGVFL 320

Query: 452 KALRGEEATARPNQYHLMRDLISSLNFEVRMV 547
           K   GE+ +AR      M +++ S  +   MV
Sbjct: 321 KTKMGEQQSARE-----MTEVLPSQRYNAHMV 347
tr_hit_id A9RZY8
Definition tr|A9RZY8|A9RZY8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 143
Score (bit) 186.0
E-value 1.0e-45
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951726|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_C18, 5'
         (652 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RZY8|A9RZY8_PHYPA Predicted protein OS=Physcomitrella paten...   186   1e-45
tr|A9TSD4|A9TSD4_PHYPA Predicted protein OS=Physcomitrella paten...   146   9e-34
tr|A9P204|A9P204_PICSI Putative uncharacterized protein OS=Picea...   135   2e-30
tr|A7R7G7|A7R7G7_VITVI Chromosome undetermined scaffold_1770, wh...   107   6e-22
tr|A7R1S1|A7R1S1_VITVI Chromosome chr4 scaffold_373, whole genom...   107   6e-22
tr|A9NUL3|A9NUL3_PICSI Putative uncharacterized protein OS=Picea...    97   1e-18
tr|Q9FWS6|Q9FWS6_ARATH F1B16.9 protein (Wound-responsive protein...    94   7e-18
tr|A9SUW4|A9SUW4_PHYPA Predicted protein OS=Physcomitrella paten...    94   7e-18
tr|A9TA66|A9TA66_PHYPA Predicted protein (Fragment) OS=Physcomit...    94   9e-18
tr|B7FJ72|B7FJ72_MEDTR Putative uncharacterized protein OS=Medic...    91   5e-17
tr|Q9FWS0|Q9FWS0_ARATH F14P1.1 protein OS=Arabidopsis thaliana G...    89   2e-16
tr|Q93VH2|Q93VH2_ARATH Putative uncharacterized protein At1g1966...    89   2e-16
tr|Q8LA58|Q8LA58_ARATH Wound-responsive protein, putative OS=Ara...    89   2e-16
tr|Q8GWL4|Q8GWL4_ARATH Putative uncharacterized protein At5g6605...    85   4e-15
tr|Q3E853|Q3E853_ARATH Uncharacterized protein At5g66050.2 OS=Ar...    85   4e-15
tr|A9RXB4|A9RXB4_PHYPA Predicted protein (Fragment) OS=Physcomit...    85   4e-15
tr|Q9LW93|Q9LW93_TOBAC Nicotiana tabacum wound inducive mRNA , c...    82   2e-14
tr|A9SCC6|A9SCC6_PHYPA Predicted protein OS=Physcomitrella paten...    80   8e-14
tr|Q5N8J3|Q5N8J3_ORYSJ cDNA clone:J013022J10, full insert sequen...    79   3e-13
tr|Q09LL3|Q09LL3_9ORYZ DNA-binding protein DSP1 OS=Oryza minuta ...    79   3e-13
tr|B8A8D2|B8A8D2_ORYSI Putative uncharacterized protein OS=Oryza...    79   3e-13
tr|A9RQ75|A9RQ75_PHYPA Predicted protein OS=Physcomitrella paten...    79   3e-13
tr|A2ZWY9|A2ZWY9_ORYSJ Putative uncharacterized protein OS=Oryza...    79   3e-13
tr|Q6YZM6|Q6YZM6_ORYSJ Os08g0357000 protein OS=Oryza sativa subs...    77   9e-13
tr|A3BSC4|A3BSC4_ORYSJ Putative uncharacterized protein OS=Oryza...    77   9e-13
tr|A2YUD2|A2YUD2_ORYSI Putative uncharacterized protein OS=Oryza...    77   9e-13
tr|A9SPM3|A9SPM3_PHYPA Predicted protein (Fragment) OS=Physcomit...    75   3e-12
tr|A5AZ38|A5AZ38_VITVI Putative uncharacterized protein OS=Vitis...    71   5e-11
tr|B6TCQ8|B6TCQ8_MAIZE Wound responsive protein OS=Zea mays PE=2...    70   9e-11
tr|A9SJ90|A9SJ90_PHYPA Predicted protein OS=Physcomitrella paten...    70   1e-10

>tr|A9RZY8|A9RZY8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_179885 PE=4 SV=1
          Length = 306

 Score =  186 bits (471), Expect = 1e-45
 Identities = 87/143 (60%), Positives = 116/143 (81%)
 Frame = +2

Query: 224 KYLEAQVVEAVSLLPSQGHLFMTLANGGEVEVNHVNPPKGRLLYRTRNPTIFLSLMSDKE 403
           +YLEAQV++AVS++P  G L MTL NG E+EV+H+NP KGRLLY++  PTIFL +     
Sbjct: 63  EYLEAQVMDAVSMVPFHGKLLMTLGNGMEMEVDHINPAKGRLLYKSSTPTIFLKVTDGSN 122

Query: 404 LILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLNFEVRMVKVTERVADTYLS 583
           L+LPI+VG+ AV MLM+AL  +E  +RPN Y LMRD++ SL++E RMV++T+RV DTY +
Sbjct: 123 LMLPIVVGEAAVSMLMRALHDDEHASRPNYYVLMRDMVESLHYEPRMVRITDRVVDTYYA 182

Query: 584 RIFIGKPGEEEMMSVDARPSDAI 652
           RI++GKPGEEE++SVDARPSDAI
Sbjct: 183 RIYLGKPGEEELVSVDARPSDAI 205


>tr|A9TSD4|A9TSD4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_197752 PE=4 SV=1
          Length = 215

 Score =  146 bits (369), Expect = 9e-34
 Identities = 66/114 (57%), Positives = 91/114 (79%)
 Frame = +2

Query: 311 VEVNHVNPPKGRLLYRTRNPTIFLSLMSDKELILPIIVGDIAVGMLMKALRGEEATARPN 490
           +EV+H+NP KGRLLY++  PTIFL +     L+LPI+VG+ AV MLM+AL  +E   RPN
Sbjct: 1   MEVDHINPAKGRLLYKSSTPTIFLKVTDGSNLMLPIVVGEAAVSMLMRALHDDEHVGRPN 60

Query: 491 QYHLMRDLISSLNFEVRMVKVTERVADTYLSRIFIGKPGEEEMMSVDARPSDAI 652
            Y LMRD++ +L +E RMV++T+RV DTY +RI++GKPGE++++SVDARPSDAI
Sbjct: 61  YYALMRDMVETLRYEPRMVRITDRVVDTYYARIYMGKPGEDDIVSVDARPSDAI 114


>tr|A9P204|A9P204_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 352

 Score =  135 bits (340), Expect = 2e-30
 Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 16/167 (9%)
 Frame = +2

Query: 200 WKSNQDDYKYLEAQVVE----------------AVSLLPSQGHLFMTLANGGEVEVNHVN 331
           W  N  DY  +EA VV+                A  L  S   L   +    E E + ++
Sbjct: 90  WDKNDGDY--VEAHVVDTELLKHQQLRKQGLSGASGLWHSSDQLTTPINEAKESEADQIS 147

Query: 332 PPKGRLLYRTRNPTIFLSLMSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRD 511
             +  LL R RNPTIFL +  D  L+LPIIVG+ A+G L+ AL  +E   RPN + LMRD
Sbjct: 148 LIEHGLLRRFRNPTIFLRIACDGNLLLPIIVGEFAIGKLIDALHEDEKGGRPNPFQLMRD 207

Query: 512 LISSLNFEVRMVKVTERVADTYLSRIFIGKPGEEEMMSVDARPSDAI 652
           L+ +L +EVRM+++TERV +TY +RI+IGKPGE+ M+SVDARPSDAI
Sbjct: 208 LVGTLGYEVRMIRITERVVNTYYARIYIGKPGEKVMLSVDARPSDAI 254


>tr|A7R7G7|A7R7G7_VITVI Chromosome undetermined scaffold_1770, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00010001001 PE=4 SV=1
          Length = 217

 Score =  107 bits (267), Expect = 6e-22
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = +2

Query: 350 LYRTRNPTIFLSLMSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLN 529
           L R ++PTIFL L  D + +LPIIVG+ +V  L+  LR +     PNQ+  +RDL+  L 
Sbjct: 40  LRRFQSPTIFLKLSCDGDFLLPIIVGEFSVEKLIDTLREDAIVDCPNQFQFVRDLVGKLG 99

Query: 530 FEVRMVKVTERVADTYLSRIFIGKPGEEEMMSVDARPSDAI 652
           ++V MVK+TER+ +TY +RI+  KPGE  + SVDARPSDAI
Sbjct: 100 YKVNMVKITERIVNTYFARIYFSKPGENNIQSVDARPSDAI 140


>tr|A7R1S1|A7R1S1_VITVI Chromosome chr4 scaffold_373, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00012369001
           PE=4 SV=1
          Length = 231

 Score =  107 bits (267), Expect = 6e-22
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = +2

Query: 350 LYRTRNPTIFLSLMSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLN 529
           L R ++PTIFL L  D + +LPIIVG+ +V  L+  LR +     PNQ+  +RDL+  L 
Sbjct: 40  LRRFQSPTIFLKLSCDGDFLLPIIVGEFSVEKLIDTLREDAIVDCPNQFQFVRDLVGKLG 99

Query: 530 FEVRMVKVTERVADTYLSRIFIGKPGEEEMMSVDARPSDAI 652
           ++V MVK+TER+ +TY +RI+  KPGE  + SVDARPSDAI
Sbjct: 100 YKVNMVKITERIVNTYFARIYFSKPGENNIQSVDARPSDAI 140


>tr|A9NUL3|A9NUL3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 330

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 52/149 (34%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
 Frame = +2

Query: 209 NQDDYKYLEAQVVEAVSLLPSQGHLFMTLANGGEVEVNHVNPPKGRLLYRTRNPTIFLSL 388
           +++D  Y+ + V+EAV +        + + +G  V   H NP  G L      P I L +
Sbjct: 84  SENDEDYVNSSVIEAVEVKSGAEGFLIKMRDGRHVRCVHNNPEGGHLPDYAPQPAIVLKM 143

Query: 389 MSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLNFEVRMVKVTERVA 568
               +L+LPIIV ++   MLM A+R  +  ARP  Y +++D+I  + +EV++V+VT RV 
Sbjct: 144 EDGSDLLLPIIVLEMPSVMLMAAIRNVQV-ARPTVYQILKDMIEKMGYEVKLVRVTRRVH 202

Query: 569 DTYLSRIFIGKPGEE-EMMSVDARPSDAI 652
           + Y +++++ K G+E + +S D RPSDAI
Sbjct: 203 EAYFAQLYLAKIGDETQRVSFDLRPSDAI 231


>tr|Q9FWS6|Q9FWS6_ARATH F1B16.9 protein (Wound-responsive protein,
           putative) (At1g75380/F1B16_15) OS=Arabidopsis thaliana
           GN=At1g75380 PE=2 SV=1
          Length = 325

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 51/149 (34%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
 Frame = +2

Query: 209 NQDDYKYLEAQVVEAVSLLPSQGHLFMTLANGGEVEVNHVNPPKGRLLYRTRNPTIFLSL 388
           N++D +Y+ + VVEAV +        + + +G ++   H NP  G L     +P I L +
Sbjct: 81  NENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQLRCVHNNPQGGHLPDYAPHPAIVLKM 140

Query: 389 MSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLNFEVRMVKVTERVA 568
                L+LPIIV ++   +LM A+   +  ARP  Y ++++++  + +EVR+V+VT+RV 
Sbjct: 141 EDGTGLLLPIIVLEMPSVLLMAAMTNVQI-ARPTMYQVVKEMVDKMGYEVRLVRVTKRVH 199

Query: 569 DTYLSRIFIGKPGE-EEMMSVDARPSDAI 652
           + Y +++F+ K G   E +S D RPSDAI
Sbjct: 200 EAYFAQLFLSKVGNASECVSFDLRPSDAI 228


>tr|A9SUW4|A9SUW4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_135698 PE=4 SV=1
          Length = 330

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 50/150 (33%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
 Frame = +2

Query: 209 NQDDYKYLEAQVVEAVSLLPSQGHLFMTLANGGEVEVNHVNPPKGRLLYRTRNPTIFLSL 388
           +++D  Y+++ V+EA+ +        + + +G  ++  H  P  G L      P I L L
Sbjct: 80  SENDEDYVDSTVLEALEVKSGPEGFIIKMRDGRTLKCEHNTPDSGHLPEYGPQPAIVLQL 139

Query: 389 MSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLNFEVRMVKVTERVA 568
               +L+LPIIV ++   ML++ +R   A  RP  YH+M+++I  + ++ +MV+VT RV 
Sbjct: 140 NKGSKLLLPIIVLELPCTMLIEGIRNVPAI-RPTVYHVMKNMIEVMGYQPKMVRVTRRVH 198

Query: 569 DTYLSRIFIGKPGEE--EMMSVDARPSDAI 652
           + Y +R+++ K G+E  E++S+D RPSDAI
Sbjct: 199 EAYYARVYLSKVGDECGEVVSLDLRPSDAI 228


>tr|A9TA66|A9TA66_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_16562 PE=4 SV=1
          Length = 248

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 50/150 (33%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
 Frame = +2

Query: 209 NQDDYKYLEAQVVEAVSLLPSQGHLFMTLANGGEVEVNHVNPPKGRLLYRTRNPTIFLSL 388
           +++D  Y+++ V+EA+ +        + + +G  ++  H  P  G L      P I L L
Sbjct: 2   SENDEDYVDSTVLEALEVKSGPEGFIIKMRDGRFLKCEHNMPESGHLPEYGPQPAIVLQL 61

Query: 389 MSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLNFEVRMVKVTERVA 568
            +  +L+LPIIV ++   ML++A+R    + RP  YH+M+D+I  + ++ +MV++T RV 
Sbjct: 62  NNASKLLLPIIVLELPCTMLLEAVRNVPIS-RPTVYHVMKDMIDVMGYQPKMVRITRRVH 120

Query: 569 DTYLSRIFIGKPGEE--EMMSVDARPSDAI 652
           + Y +R+++ K G E  E++S+D RPSDAI
Sbjct: 121 EAYYARVYMSKAGNESGEVVSLDLRPSDAI 150


>tr|B7FJ72|B7FJ72_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 325

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
 Frame = +2

Query: 209 NQDDYKYLEAQVVEAVSLLPSQGHLFMTLANGGEVEVNHVNPPKGRLLYRTRNPTIFLSL 388
           N++D  Y+ + ++EAV +        + + +G  +   H +P  G L     +P I L +
Sbjct: 78  NENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCVHNSPHGGLLPDYAPHPAIVLKM 137

Query: 389 MSDKELILPIIVGDIAVGMLMKALRGEEATARPNQYHLMRDLISSLNFEVRMVKVTERVA 568
                L+LPIIV ++   +LM A+R  +  ARP  Y +++++I  + +EVR V+VT+RV 
Sbjct: 138 EDGTGLLLPIIVLEMPSVLLMAAVRNVQI-ARPTLYQVVKEMIDKMGYEVRAVRVTKRVQ 196

Query: 569 DTYLSRIFIGKPG-EEEMMSVDARPSDAI 652
           + Y ++I++ K G E E MS D RPSDAI
Sbjct: 197 EAYFAQIYLSKVGNESECMSFDLRPSDAI 225