DK951739 |
Clone id |
TST38A01NGRL0012_D07 |
Library |
TST38 |
Length |
673 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_D07. 5' end sequence. |
Accession |
DK951739 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL265Contig1 |
Sequence |
GTCCAACTGCTTCCCATATCTGTATATATAACGCGCTCCCCACTCACACCCACTCCATCT CATTCCGAGCGCGGCTCACAGATACGCAGCTCTTCGCCTCTTCATATTCTGCTCCCGTCT CTCATACACAGACACGAACCTACAGGATTCGGAATCCTTGCTCTCATCGCCGACGATGGC TCTCGTTTTCAAGGTCAAGCATGGAGACACCCTCCGCAGATGGGTGGTTTCTGACTCAAT CAGTGCAGAGATGTTCCCAGTTACATTGGAGCAATTGCAGGCCAAAGTCAGGGAGCTCTT CCAGTTCCCTCCTTCTGCTGTGCTCGCTTTTACCTACTTAGATAAAGATAATGATGTGGT TACGCTGGGGGATGATCGTGATCTTGTGGACGCATGTCTTGTTCAATGCTTGAACCCACT TCGCCTTGAGGTTCAGGTCTTGGAATCAAAGTCAAATGGAAGTGATCGCGCACACCAGCC AGCAGACAATTACAACATGGAAGTCTTTCTAAAGCTTTTGTTTCCTCATGCAACAGCTGA GGCTTTGCAAGGTTTTCTACAGTCGCTTGACCCTTCGCTATCTATTGCAACTCTTATTTT AAAGGCTCAGGATGCTTTCAAGGACTTCTTAGCTCATGCAGCAAGGCCAGAGTTTCCCAA ACCTGGACCATCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O13965 |
Definition |
sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces pombe |
Align length |
63 |
Score (bit) |
34.3 |
E-value |
0.62 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SHX9 |
Definition |
tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
88 |
Score (bit) |
85.1 |
E-value |
4.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951739|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_D07, 5' (673 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella paten... 85 4e-15 tr|A9NT24|A9NT24_PICSI Putative uncharacterized protein OS=Picea... 80 9e-14 tr|A9NP76|A9NP76_PICSI Putative uncharacterized protein OS=Picea... 79 2e-13 tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum ... 77 8e-13 tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subs... 74 8e-12 tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa G... 74 8e-12 tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza... 74 8e-12 tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subs... 74 1e-11 tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza... 74 1e-11 tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana plumbaginif... 66 2e-09 tr|A9S1V5|A9S1V5_PHYPA Predicted protein OS=Physcomitrella paten... 58 6e-07 tr|Q9SB64|Q9SB64_ARATH Putative uncharacterized protein AT4g2469... 52 4e-05 tr|A5ADS2|A5ADS2_VITVI Putative uncharacterized protein OS=Vitis... 51 6e-05 tr|A0C582|A0C582_PARTE Chromosome undetermined scaffold_15, whol... 37 0.87 tr|Q14VK1|Q14VK1_9VIRU ORF129 OS=Ranid herpesvirus 1 PE=4 SV=1 37 1.5 tr|Q55CE3|Q55CE3_DICDI ZZ-type Zn finger-containing protein OS=D... 37 1.5 tr|A8N2P6|A8N2P6_COPC7 Predicted protein OS=Coprinopsis cinerea ... 37 1.5 tr|Q5KMK4|Q5KMK4_CRYNE Heterokaryon incompatibility protein HET-... 31 1.9 tr|Q4SQC2|Q4SQC2_TETNG Chromosome 4 SCAF14533, whole genome shot... 35 5.6 tr|B6NHG6|B6NHG6_BRAFL Putative uncharacterized protein OS=Branc... 35 5.6 tr|Q1H005|Q1H005_METFK Diaminohydroxyphosphoribosylaminopyrimidi... 34 7.3 tr|Q17NE9|Q17NE9_AEDAE Putative uncharacterized protein (Fragmen... 34 7.3 tr|A8PI55|A8PI55_COPC7 Predicted protein OS=Coprinopsis cinerea ... 34 7.3 tr|Q39GN9|Q39GN9_BURS3 ABC cobalamin/Fe3+-siderophore transporte... 34 9.6 tr|Q3XXI1|Q3XXI1_ENTFC Haloacid dehalogenase-like hydrolase:Cati... 34 9.6 tr|A0C9S2|A0C9S2_PARTE Chromosome undetermined scaffold_16, whol... 34 9.6 tr|A7EUB6|A7EUB6_SCLS1 Putative uncharacterized protein OS=Scler... 34 9.6
>tr|A9SHX9|A9SHX9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212537 PE=4 SV=1 Length = 732
Score = 85.1 bits (209), Expect = 4e-15 Identities = 42/88 (47%), Positives = 55/88 (62%) Frame = +2
Query: 185 VFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVVT 364 VFK+KHGD +RR+ V S+ + QL+ +R+ F+ P S+ L Y DKD DVVT Sbjct: 5 VFKIKHGDVVRRFTVQPSVPGGGPDMNFSQLEDTIRQAFKLPASSDLVINYNDKDGDVVT 64
Query: 365 LGDDRDLVDACLVQCLNPLRLEVQVLES 448 + D DL DAC++Q LNPLRL V ES Sbjct: 65 MAGDHDLYDACVIQELNPLRLTVTAHES 92
>tr|A9NT24|A9NT24_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 174
Score = 80.5 bits (197), Expect = 9e-14 Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 3/118 (2%) Frame = +2
Query: 176 MALVFKVKHGDTLRRWVVSDSISAEMFP-VTLEQLQAKVRELFQFPPSAVLAFTYLDKDN 352 MALV KVK+ LRR + + E P + ++ L+ K+RELF+ P+A ++ TY D+D Sbjct: 1 MALVVKVKYQGILRRLTLQ--LREEYVPEINMDALKCKIRELFKLNPNADMSITYTDEDG 58
Query: 353 DVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPAD--NYNMEVFLKLL 520 DVVT+ DD D +DA + Q LNPLRL+V + SN S+R+ PA+ N ME L+ L Sbjct: 59 DVVTMADDVDFLDA-VRQGLNPLRLDVSLATEPSN-SERSSTPAEQRNEGMEPLLEAL 114
>tr|A9NP76|A9NP76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 174
Score = 79.3 bits (194), Expect = 2e-13 Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 3/118 (2%) Frame = +2
Query: 176 MALVFKVKHGDTLRRWVVSDSISAEMFP-VTLEQLQAKVRELFQFPPSAVLAFTYLDKDN 352 M LV KVK+ LRR + + E P + ++ L+ K+RELF+ P+A ++ TY D+D Sbjct: 1 MTLVVKVKYQGILRRLTLQ--LREEYVPEINMDALKCKIRELFKLNPNADMSITYTDEDG 58
Query: 353 DVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPAD--NYNMEVFLKLL 520 DVVT+ DD D +DA + Q LNPLRL+V + SN S+R+ PA+ N ME L+ L Sbjct: 59 DVVTMADDVDFLDA-VRQGLNPLRLDVSLATEPSN-SERSSSPAEQRNEGMEPLLEAL 114
>tr|B8K1X5|B8K1X5_WHEAT Ubiquitin-associated protein OS=Triticum aestivum GN=UBA PE=2 SV=1 Length = 870
Score = 77.4 bits (189), Expect = 8e-13 Identities = 41/94 (43%), Positives = 58/94 (61%) Frame = +2
Query: 182 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 361 +V KVK+GDTL+R+ + ++ F + L L++K+ F+F P A TY D+D DVV Sbjct: 21 VVVKVKYGDTLKRF--NGYVNGTHFTLNLSALRSKIASAFKFAPDADFILTYTDEDGDVV 78
Query: 362 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGS 463 L DD DL DA + Q LNPLR+ VQ+ S + S Sbjct: 79 MLDDDEDLHDAAIHQKLNPLRINVQLKNSHAGAS 112
>tr|Q7XK43|Q7XK43_ORYSJ Os04g0476800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0044K18.2 PE=4 SV=1 Length = 881
Score = 73.9 bits (180), Expect = 8e-12 Identities = 42/99 (42%), Positives = 58/99 (58%) Frame = +2
Query: 182 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 361 LV KVK G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75
Query: 362 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 478 L DD DL DA + Q LNPLR+ V+ L+S S+G + Q Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113
>tr|Q01JY6|Q01JY6_ORYSA OSIGBa0116M22.2 protein OS=Oryza sativa GN=OSIGBa0116M22.2 PE=4 SV=1 Length = 881
Score = 73.9 bits (180), Expect = 8e-12 Identities = 42/99 (42%), Positives = 58/99 (58%) Frame = +2
Query: 182 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 361 LV KVK G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75
Query: 362 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 478 L DD DL DA + Q LNPLR+ V+ L+S S+G + Q Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113
>tr|B8AVG3|B8AVG3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16310 PE=4 SV=1 Length = 881
Score = 73.9 bits (180), Expect = 8e-12 Identities = 42/99 (42%), Positives = 58/99 (58%) Frame = +2
Query: 182 LVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDVV 361 LV KVK G TL+R+ ++ F + L L++K+ F+F P TY D+D DVV Sbjct: 18 LVVKVKFGGTLKRFTAF--VNGPHFDLNLAALRSKIASAFKFNPDTEFVLTYTDEDGDVV 75
Query: 362 TLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQ 478 L DD DL DA + Q LNPLR+ V+ L+S S+G + Q Sbjct: 76 ILDDDSDLCDAAISQRLNPLRINVE-LKSSSDGVHQTKQ 113
>tr|Q6ZH84|Q6ZH84_ORYSJ Os02g0593700 protein OS=Oryza sativa subsp. japonica GN=OJ1067_B01.6-1 PE=2 SV=1 Length = 845
Score = 73.6 bits (179), Expect = 1e-11 Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Frame = +2
Query: 152 ESLLSSPT-MALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLA 328 E L S P +V KVK+G+TL+R+ + F + L L++K+ F+F Sbjct: 10 EGLASRPDEWDVVLKVKYGETLKRF--GGYVQGPQFSLNLSALRSKIASAFKFGSDVDFI 67
Query: 329 FTYLDKDNDVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPADN 490 TY D+D D+V L DD DL DA + Q LNPLR+ VQ+ S + Q +DN Sbjct: 68 LTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSDN 121
>tr|A2X6P6|A2X6P6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07886 PE=4 SV=1 Length = 845
Score = 73.6 bits (179), Expect = 1e-11 Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Frame = +2
Query: 152 ESLLSSPT-MALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLA 328 E L S P +V KVK+G+TL+R+ + F + L L++K+ F+F Sbjct: 10 EGLASRPDEWDVVLKVKYGETLKRF--GGYVQGPQFSLNLSALRSKIASAFKFGSDVDFI 67
Query: 329 FTYLDKDNDVVTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPADN 490 TY D+D D+V L DD DL DA + Q LNPLR+ VQ+ S + Q +DN Sbjct: 68 LTYTDEDGDIVMLDDDDDLHDAAIHQKLNPLRINVQLNNSHTAAPQAKQQDSDN 121
>tr|Q0ZII2|Q0ZII2_NICPL Joka2 (Fragment) OS=Nicotiana plumbaginifolia PE=2 SV=1 Length = 467
Score = 65.9 bits (159), Expect = 2e-09 Identities = 40/102 (39%), Positives = 62/102 (60%) Frame = +2
Query: 179 ALVFKVKHGDTLRRWVVSDSISAEMFPVTLEQLQAKVRELFQFPPSAVLAFTYLDKDNDV 358 A+V KVK+ +TLRR+ + + E + ++ L K+ +LF A L TY+D+D DV Sbjct: 1 AIVIKVKYEETLRRF--NARVINEKLDLNMDGLSDKIFQLFNIARDAELILTYVDEDGDV 58
Query: 359 VTLGDDRDLVDACLVQCLNPLRLEVQVLESKSNGSDRAHQPA 484 VTL DD DL D + Q LNPLR+ V++ N ++R+ +P+ Sbjct: 59 VTLVDDEDLQDV-MRQDLNPLRISVRL-----NAAERSSRPS 94
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