DK951769 |
Clone id |
TST38A01NGRL0012_E14 |
Library |
TST38 |
Length |
599 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_E14. 5' end sequence. |
Accession |
DK951769 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1700Contig1 |
Sequence |
GCGATGTATTGCATGCAAATTATGTGAAGCAGTATGTCCCGCCCAAGCCATAACAATTGA AGCAGAGGAGCGTGAAGATGGTAGTCGCAGGACTACAAGATACGATATCGATATGACAAA ATGCATTTACTGTGGCTTTTGCCAAGAAGCCTGCCCAGTGGATGCAATAGTTGAGGGGCC AAACTTTGAGTTTGCAACCGAAACGCATGAGGAGCTTCTTTATGACAAGGAGAAACTGCT CGAGAATGGAGACAGATGGGAAACAGAAATTGCAGAAAATCTACGATCTGAGAGCATGTA TCGATAAGCCCTGAGAATGTTCATTTCATGTGCTCAGGGTTAGGAGATTGGCTTTGTTGC TTGTTTTGAGGTCACGCTCCTGTTGAAGGCTAGTGACTGATGTTCACAGGCTTTCTCACA TAAAGTAAAGAAAGCATCACAGTGCTCTGTTAGCCTTTGTATGAAAGATACACACATGGA TGTGTGAAGGGGTCTATGTACATTTAATAATATGACTATAGCAGGTCTTACATGTTTTTA TGGGATCATGGTTGGCTTATAACTGCCATTCACTTCAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q42599 |
Definition |
sp|Q42599|NDUS8_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Arabidopsis thaliana |
Align length |
101 |
Score (bit) |
187.0 |
E-value |
4.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951769|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_E14, 5' (576 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q42599|NDUS8_ARATH NADH dehydrogenase [ubiquinone] iron-sulfu... 187 4e-47 sp|P80269|NDUS8_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfu... 186 6e-47 sp|O24143|NDUS8_TOBAC NADH dehydrogenase [ubiquinone] iron-sulfu... 184 3e-46 sp|O21233|NDUS8_RECAM NADH-ubiquinone oxidoreductase subunit 8 O... 173 6e-43 sp|Q60HE3|NDUS8_MACFA NADH dehydrogenase [ubiquinone] iron-sulfu... 169 1e-41 sp|P42028|NDUS8_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfu... 169 1e-41 sp|Q5RC57|NDUS8_PONAB NADH dehydrogenase [ubiquinone] iron-sulfu... 168 2e-41 sp|Q0MQI3|NDUS8_PANTR NADH dehydrogenase [ubiquinone] iron-sulfu... 168 2e-41 sp|Q8K3J1|NDUS8_MOUSE NADH dehydrogenase [ubiquinone] iron-sulfu... 168 2e-41 sp|O00217|NDUS8_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfu... 168 2e-41 sp|Q5LPS9|NUOI_SILPO NADH-quinone oxidoreductase subunit I OS=Si... 168 2e-41 sp|Q22619|NDUS8_CAEEL Probable NADH dehydrogenase [ubiquinone] i... 167 3e-41 sp|Q1GIM9|NUOI_SILST NADH-quinone oxidoreductase subunit I OS=Si... 167 5e-41 sp|Q0MQI2|NDUS8_GORGO NADH dehydrogenase [ubiquinone] iron-sulfu... 167 5e-41 sp|P29921|NQO9_PARDE NADH-quinone oxidoreductase subunit 9 OS=Pa... 166 6e-41 sp|A1B486|NUOI_PARDP NADH-quinone oxidoreductase subunit I OS=Pa... 166 8e-41 sp|Q28T58|NUOI_JANSC NADH-quinone oxidoreductase subunit I OS=Ja... 164 2e-40 sp|Q0APY2|NUOI_MARMM NADH-quinone oxidoreductase subunit I OS=Ma... 164 3e-40 sp|Q3J3F0|NUOI1_RHOS4 NADH-quinone oxidoreductase subunit I 1 OS... 164 3e-40 sp|A3PIX9|NUOI1_RHOS1 NADH-quinone oxidoreductase subunit I 1 OS... 164 3e-40 sp|Q1GTK7|NUOI_SPHAL NADH-quinone oxidoreductase subunit I OS=Sp... 164 4e-40 sp|Q163R7|NUOI_ROSDO NADH-quinone oxidoreductase subunit I OS=Ro... 164 4e-40 sp|Q2G5Z4|NUOI_NOVAD NADH-quinone oxidoreductase subunit I OS=No... 164 4e-40 sp|Q0C1D6|NUOI_HYPNA NADH-quinone oxidoreductase subunit I OS=Hy... 163 7e-40 sp|Q2RU32|NUOI_RHORT NADH-quinone oxidoreductase subunit I OS=Rh... 162 1e-39 sp|Q2NA74|NUOI_ERYLH NADH-quinone oxidoreductase subunit I OS=Er... 162 1e-39 sp|P42031|NUOI_RHOCA NADH-quinone oxidoreductase subunit I OS=Rh... 161 2e-39 sp|Q12644|NDUS8_NEUCR NADH-ubiquinone oxidoreductase 23 kDa subu... 159 7e-39 sp|A5CFN6|NUOI_ORITB NADH-quinone oxidoreductase subunit I OS=Or... 159 9e-39 sp|Q9A6Y4|NUOI_CAUCR NADH-quinone oxidoreductase subunit I OS=Ca... 159 1e-38
>sp|Q42599|NDUS8_ARATH NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Arabidopsis thaliana GN=TYKY PE=1 SV=1 Length = 222
Score = 187 bits (474), Expect = 4e-47 Identities = 88/101 (87%), Positives = 89/101 (88%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 122 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEFATETH NGDRWETEIAENLRSES+YR Sbjct: 182 NFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 222
>sp|P80269|NDUS8_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Solanum tuberosum GN=TYKY PE=1 SV=2 Length = 229
Score = 186 bits (473), Expect = 6e-47 Identities = 87/101 (86%), Positives = 89/101 (88%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEA+CPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 129 RCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 188
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEFATETH NGDRWETEIAENLRSES+YR Sbjct: 189 NFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 229
>sp|O24143|NDUS8_TOBAC NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Nicotiana tabacum GN=TYKY PE=2 SV=1 Length = 230
Score = 184 bits (467), Expect = 3e-46 Identities = 86/101 (85%), Positives = 88/101 (87%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEA+CPAQAITIEAE REDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 130 RCIACKLCEAICPAQAITIEAEAREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 189
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEFATETH NGDRWETEIAENLRSES+YR Sbjct: 190 NFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 230
>sp|O21233|NDUS8_RECAM NADH-ubiquinone oxidoreductase subunit 8 OS=Reclinomonas americana GN=NAD8 PE=3 SV=1 Length = 162
Score = 173 bits (438), Expect = 6e-43 Identities = 80/101 (79%), Positives = 85/101 (84%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEA+CPAQAITIE+E R DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 62 RCIACKLCEAICPAQAITIESEPRIDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 121
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEFATETH NGDRWETEIA NL +E++YR Sbjct: 122 NFEFATETHEELLYDKEKLLQNGDRWETEIAANLANEALYR 162
>sp|Q60HE3|NDUS8_MACFA NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Macaca fascicularis GN=NDUFS8 PE=2 SV=1 Length = 210
Score = 169 bits (427), Expect = 1e-41 Identities = 77/101 (76%), Positives = 84/101 (83%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEAVCPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 110 RCIACKLCEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 169
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEF+TETH NGD+WE EIA N++++ +YR Sbjct: 170 NFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR 210
>sp|P42028|NDUS8_BOVIN NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Bos taurus GN=NDUFS8 PE=1 SV=1 Length = 212
Score = 169 bits (427), Expect = 1e-41 Identities = 77/101 (76%), Positives = 84/101 (83%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEAVCPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 112 RCIACKLCEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 171
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEF+TETH NGD+WE EIA N++++ +YR Sbjct: 172 NFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR 212
>sp|Q5RC57|NDUS8_PONAB NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Pongo abelii GN=NDUFS8 PE=2 SV=2 Length = 210
Score = 168 bits (426), Expect = 2e-41 Identities = 76/101 (75%), Positives = 84/101 (83%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEA+CPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 110 RCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 169
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEF+TETH NGD+WE EIA N++++ +YR Sbjct: 170 NFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR 210
>sp|Q0MQI3|NDUS8_PANTR NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Pan troglodytes GN=NDUFS8 PE=2 SV=1 Length = 210
Score = 168 bits (426), Expect = 2e-41 Identities = 76/101 (75%), Positives = 84/101 (83%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEA+CPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 110 RCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 169
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEF+TETH NGD+WE EIA N++++ +YR Sbjct: 170 NFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR 210
>sp|Q8K3J1|NDUS8_MOUSE NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Mus musculus GN=Ndufs8 PE=1 SV=1 Length = 212
Score = 168 bits (426), Expect = 2e-41 Identities = 76/101 (75%), Positives = 84/101 (83%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEA+CPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 112 RCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 171
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEF+TETH NGD+WE EIA N++++ +YR Sbjct: 172 NFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR 212
>sp|O00217|NDUS8_HUMAN NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Homo sapiens GN=NDUFS8 PE=1 SV=1 Length = 210
Score = 168 bits (426), Expect = 2e-41 Identities = 76/101 (75%), Positives = 84/101 (83%) Frame = +2
Query: 2 RCIACKLCEAVCPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 181 RCIACKLCEA+CPAQAITIEAE R DGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP Sbjct: 110 RCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGP 169
Query: 182 NFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESMYR 304 NFEF+TETH NGD+WE EIA N++++ +YR Sbjct: 170 NFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR 210
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FX83 |
Definition |
tr|Q9FX83|Q9FX83_ARATH Putative NADH-ubiquinone oxidoreductase (NADH:ubiquinone oxidoreductase, putative) OS=Arabidopsis thaliana |
Align length |
101 |
Score (bit) |
187.0 |
E-value |
5.0e-46 |
Report |
|