DK951773 [AcEST]

DK951773
Clone id	TST38A01NGRL0012_E18
Library	TST38
Length	446
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_E18. 5' end sequence.
Accession	DK951773
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL1Contig3
Sequence	CTCGCAGTGATTTTGATAGTTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAA CTTTATCTTCGCAGAAAATATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTA ATCAATCTCGTCACTCATTCATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGT TTTGGTACCCCAAGAAATACTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAA AATCTATGGGTAGACGTCTAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAAT CTGGGAAAGAAAGTTGGAATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTT GGTTGAACGGGATCCCTCGTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTT CCTGAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951773\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_E18, 5' (424 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A6D2J9
Definition	tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1
Align length	48
Score (bit)	34.7
E-value	2.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951773\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_E18, 5' (424 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 2.4 >tr\|A6D2J9\|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 GN=VSAK1_01567 PE=4 SV=1 Length = 319 Score = 34.7 bits (78), Expect = 2.4 Identities = 16/48 (33%), Positives = 30/48 (62%) Frame = -2 Query: 147 LKMSDEIDSTSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHC 4 LK +++E+D ST + ++++F A +F+L VNL + R++ Q C Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKC 281