DK951790 |
Clone id |
TST38A01NGRL0012_F11 |
Library |
TST38 |
Length |
606 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_F11. 5' end sequence. |
Accession |
DK951790 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL67Contig1 |
Sequence |
AAGCGAAGTAGCATCCACGCTCTTGCGCTCTCTGCACAGAGAACTGCAAGATCCGTCGCC ATGTATACTGCTCGGAGGAAGATCCACAAGGAGAAGGGGCTGGAGCCAGATGATTTTGAG GAGTCCGTTGCTCAGGCTCTTTTCGATCTGGAGAACTCAAACCAGGAATTGAAGAGTGAC CTGCGAGACCTTTTCATCAACTCTGCCAAGCAGGTTGATATTTCAGGAAGCCGGAAGGCT GTTATCATCCACGTGCCTTACAGGCTCTGCAAAGCCTTCCGAAAAATTCACTCTCGTCTT GTCCGGGAGTTGGAGAAGAAGTTCAGTGGGAAGGATGTTATTATGATTGCCACTAGACGT ATTTTGAGGCCTCCAAAGAAAGGGACGGCTGTAGCTCGCCCTCGTAATCGTACACTAACA GCTGTTCATGAAGCTATTCTCGAAGATTTGGTGTACCCGGCTGAGATTGTTGGAAAGCGA GTACGCTTCCGTCTGGATGGTTCAAGAATCATGCGGGTGTATTTAGATCCAAAGGAAAGG AACAGCACTGAGTACAAGTTGGAAACATTCAGCGGAGTTTATAAGAAGCTGACCGGCAAG GAAGTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZNS1 |
Definition |
sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 OS=Avicennia marina |
Align length |
182 |
Score (bit) |
291.0 |
E-value |
1.0e-78 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S5I8 |
Definition |
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
181 |
Score (bit) |
318.0 |
E-value |
1.0e-85 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951790|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_F11, 5' (606 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella paten... 318 1e-85 tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella paten... 316 8e-85 tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella paten... 312 8e-84 tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella paten... 312 1e-83 tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea... 307 4e-82 tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 298 1e-79 tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis... 296 8e-79 tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 295 2e-78 tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subs... 294 3e-78 tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expre... 294 3e-78 tr|A2XFL9|A2XFL9_ORYSI Putative uncharacterized protein OS=Oryza... 294 3e-78 tr|A2XFL8|A2XFL8_ORYSI Putative uncharacterized protein OS=Oryza... 294 3e-78 tr|B7FMQ4|B7FMQ4_MEDTR Putative uncharacterized protein OS=Medic... 293 7e-78 tr|A5AFQ8|A5AFQ8_VITVI Putative uncharacterized protein (Chromos... 292 9e-78 tr|Q3HRX6|Q3HRX6_SOLTU Putative uncharacterized protein (40S rib... 292 1e-77 tr|B7FGT0|B7FGT0_MEDTR Putative uncharacterized protein OS=Medic... 291 2e-77 tr|Q5I7K2|Q5I7K2_WHEAT Ribosomal protein S7 OS=Triticum aestivum... 291 3e-77 tr|A5AWN5|A5AWN5_VITVI Putative uncharacterized protein (Chromos... 291 3e-77 tr|B8AX04|B8AX04_ORYSI Putative uncharacterized protein OS=Oryza... 290 3e-77 tr|B4FZN6|B4FZN6_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 290 6e-77 tr|Q0DIZ8|Q0DIZ8_ORYSJ Os05g0346300 protein OS=Oryza sativa subs... 288 2e-76 tr|A9PBS2|A9PBS2_POPTR Putative uncharacterized protein OS=Popul... 287 3e-76 tr|A9PBB9|A9PBB9_POPTR Putative uncharacterized protein OS=Popul... 287 3e-76 tr|A9PCT6|A9PCT6_POPTR Putative uncharacterized protein OS=Popul... 287 4e-76 tr|B6TE31|B6TE31_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2... 286 6e-76 tr|A9PEW2|A9PEW2_POPTR Putative uncharacterized protein OS=Popul... 286 8e-76 tr|Q1KUM0|Q1KUM0_9ROSI Putative uncharacterized protein OS=Cleom... 284 2e-75 tr|A9PBV3|A9PBV3_POPTR Putative uncharacterized protein OS=Popul... 284 2e-75 tr|Q1KUR6|Q1KUR6_9ROSI Putative uncharacterized protein OS=Cleom... 284 3e-75 tr|A3B2X6|A3B2X6_ORYSJ Putative uncharacterized protein OS=Oryza... 279 1e-73
>tr|A9S5I8|A9S5I8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208894 PE=4 SV=1 Length = 195
Score = 318 bits (816), Expect = 1e-85 Identities = 158/181 (87%), Positives = 176/181 (97%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 243 +TARRKI KEKG EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 +IHVPYRL KAF+KIH+RLVRELEKKFSGKDVI+IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 VIHVPYRLRKAFQKIHARLVRELEKKFSGKDVIVIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 424 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 603 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERNSTEYKLETF+GVYKKLTGKE Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNSTEYKLETFAGVYKKLTGKE 182
Query: 604 V 606 V Sbjct: 183 V 183
>tr|A9T1N9|A9T1N9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86905 PE=4 SV=1 Length = 195
Score = 316 bits (809), Expect = 8e-85 Identities = 156/181 (86%), Positives = 175/181 (96%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 243 +TARRKI KEKG EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLT Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVVIATRRILRPPKKGSAVNRPRSRTLTT 122
Query: 424 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 603 VHEA+LEDLVYP+EIVGKRVR+RLDGSRIMRVYLDPKERN+TEYKLETF+GVYKKLTGKE Sbjct: 123 VHEAVLEDLVYPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKLETFAGVYKKLTGKE 182
Query: 604 V 606 V Sbjct: 183 V 183
>tr|A9SXW3|A9SXW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234408 PE=4 SV=1 Length = 195
Score = 312 bits (800), Expect = 8e-84 Identities = 154/181 (85%), Positives = 176/181 (97%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 243 +TARRKI KEKG EPD+FEESVAQALFDLE+++ ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKEKGQEPDEFEESVAQALFDLESTSSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 IIHVPYRL KAF+KIH+RLVRELEKKFSGKDV++IATRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPYRLRKAFQKIHARLVRELEKKFSGKDVVIIATRRILRPPKKGSAVNRPRSRTLTA 122
Query: 424 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 603 VHEA+LEDLV+P+EIVGKRVR+RLDGSRIMRVYLDPKERN+TEYKL+TF+GVYKKLTGKE Sbjct: 123 VHEAVLEDLVHPSEIVGKRVRYRLDGSRIMRVYLDPKERNTTEYKLDTFAGVYKKLTGKE 182
Query: 604 V 606 V Sbjct: 183 V 183
>tr|A9TXW9|A9TXW9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172596 PE=4 SV=1 Length = 195
Score = 312 bits (799), Expect = 1e-83 Identities = 154/181 (85%), Positives = 173/181 (95%) Frame = +1
Query: 64 YTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKAV 243 +TARRKI KE G EPD+FEESVAQALFDLE++N ELKS+LRDLFINSAK+VD+SG+RKAV Sbjct: 3 FTARRKIQKENGQEPDEFEESVAQALFDLESTNSELKSELRDLFINSAKEVDVSGNRKAV 62
Query: 244 IIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLTA 423 IIHVP+RL KAF+KIH+RLVRELEKKFSGKDV+ I TRRILRPPKKG+AV RPR+RTLTA Sbjct: 63 IIHVPFRLRKAFQKIHARLVRELEKKFSGKDVVFIVTRRILRPPKKGSAVNRPRSRTLTA 122
Query: 424 VHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGKE 603 VHEA+LEDLVYP+EIVGKR+R+RLDGSRIMRVYLDPKERNSTEYKLET+SGVYKKLTGKE Sbjct: 123 VHEAVLEDLVYPSEIVGKRMRYRLDGSRIMRVYLDPKERNSTEYKLETYSGVYKKLTGKE 182
Query: 604 V 606 V Sbjct: 183 V 183
>tr|A9NQ60|A9NQ60_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 192
Score = 307 bits (786), Expect = 4e-82 Identities = 150/182 (82%), Positives = 171/182 (93%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 240 MYTARRKI KEK EP++FEESVAQALFDLE++NQELKS+L+DLFINSA Q DISG+RKA Sbjct: 1 MYTARRKIQKEKNAEPNEFEESVAQALFDLESTNQELKSELKDLFINSASQYDISGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V++HVPYRL KAFRKIH RLVRELEKKFSGKDV++IATRRI+RPPKKG+A RPR+RTLT Sbjct: 61 VVVHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVVIATRRIVRPPKKGSAAVRPRSRTLT 120
Query: 421 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGK 600 AVHEAILEDLVYPAEIVGKRVR+RLDGS+IM++YLDPKERN+TEYKLETF GVY+KL GK Sbjct: 121 AVHEAILEDLVYPAEIVGKRVRYRLDGSKIMKIYLDPKERNNTEYKLETFGGVYRKLCGK 180
Query: 601 EV 606 +V Sbjct: 181 DV 182
>tr|B3TLX3|B3TLX3_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 191
Score = 298 bits (764), Expect = 1e-79 Identities = 143/182 (78%), Positives = 171/182 (93%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 240 MYTAR+KI KEK +EP +FEE VAQALFDLEN+NQELKSDL+DL+INSA Q+D++G+RKA Sbjct: 1 MYTARKKIQKEKDVEPTEFEEIVAQALFDLENTNQELKSDLKDLYINSAVQIDVAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAFRKIH RLVRE+EKKFSGKDVI IATRRILRPPKKG+AV RPR+RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVREMEKKFSGKDVIFIATRRILRPPKKGSAVVRPRSRTLT 120
Query: 421 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGK 600 VHEA+LED+VYPAEIVGKR+R+RLDGS+I++++LDPKERN+TEYKL++F+GVY+KLTGK Sbjct: 121 HVHEAMLEDIVYPAEIVGKRIRYRLDGSKIIKIFLDPKERNNTEYKLDSFAGVYRKLTGK 180
Query: 601 EV 606 V Sbjct: 181 NV 182
>tr|B3TM44|B3TM44_ELAGV Ribosomal protein S7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 189
Score = 296 bits (757), Expect = 8e-79 Identities = 141/182 (77%), Positives = 171/182 (93%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 240 M+TAR+KI K+K LEP +FEESVAQALFDLEN+NQELKSDLRDL+INSA Q+D++G+RKA Sbjct: 1 MFTARKKIQKDKDLEPSEFEESVAQALFDLENNNQELKSDLRDLYINSAVQMDVAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IH+PYRL KA+RKIH RLVRELEKKFSGKDVI+IATRRILRPPKKG+A+ RPR+RTLT Sbjct: 61 VVIHIPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAIVRPRSRTLT 120
Query: 421 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGK 600 AVH+A LED+VYPAEIVGKR+R+ LDGS+I++++LDPKERN+TEYKLETF+GVY+KL K Sbjct: 121 AVHDATLEDVVYPAEIVGKRIRYHLDGSKIIKIFLDPKERNTTEYKLETFTGVYRKLCEK 180
Query: 601 EV 606 +V Sbjct: 181 DV 182
>tr|B6SHM7|B6SHM7_MAIZE 40S ribosomal protein S7 OS=Zea mays PE=2 SV=1 Length = 192
Score = 295 bits (754), Expect = 2e-78 Identities = 141/182 (77%), Positives = 169/182 (92%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 240 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKSDL+DL+IN+A Q+D++GSRKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSDLKDLYINNAIQMDVTGSRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAFRKIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVLRPRTRTLT 120
Query: 421 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGK 600 AVH+ ILED+VYPAEIVGKRVR+RLDGS+I++++LDPKERN+TEYKLET + VY++L GK Sbjct: 121 AVHDGILEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLETCTAVYRRLCGK 180
Query: 601 EV 606 +V Sbjct: 181 DV 182
>tr|Q10MS5|Q10MS5_ORYSJ Os03g0297100 protein OS=Oryza sativa subsp. japonica GN=Os03g0297100 PE=2 SV=1 Length = 192
Score = 294 bits (752), Expect = 3e-78 Identities = 138/182 (75%), Positives = 170/182 (93%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 240 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 421 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGK 600 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+TEYKLETFS VY++L GK Sbjct: 121 AVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK 180
Query: 601 EV 606 +V Sbjct: 181 DV 182
>tr|Q10MS4|Q10MS4_ORYSJ 40S ribosomal protein S7, putative, expressed (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g18580 PE=4 SV=1 Length = 192
Score = 294 bits (752), Expect = 3e-78 Identities = 138/182 (75%), Positives = 170/182 (93%) Frame = +1
Query: 61 MYTARRKIHKEKGLEPDDFEESVAQALFDLENSNQELKSDLRDLFINSAKQVDISGSRKA 240 MYTAR+KI KEKGLEP +FE+SVAQA FDLEN NQELKS+L+DL+IN+A Q+DI+G+RKA Sbjct: 1 MYTARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKA 60
Query: 241 VIIHVPYRLCKAFRKIHSRLVRELEKKFSGKDVIMIATRRILRPPKKGTAVARPRNRTLT 420 V+IHVPYRL KAF+KIH RLVRELEKKFSGKDV+++ATRRI+RPPKKG+AV RPR RTLT Sbjct: 61 VVIHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVQRPRTRTLT 120
Query: 421 AVHEAILEDLVYPAEIVGKRVRFRLDGSRIMRVYLDPKERNSTEYKLETFSGVYKKLTGK 600 AVH+ ILED+VYPAEIVGKR+R+RLDG+++++++LDPKERN+TEYKLETFS VY++L GK Sbjct: 121 AVHDCILEDVVYPAEIVGKRIRYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYRRLCGK 180
Query: 601 EV 606 +V Sbjct: 181 DV 182
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