| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951796|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_F17, 5'
(582 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 130 2e-32
sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic ... 133 3e-32
sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic ... 133 3e-32
sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic ... 132 3e-32
sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic ... 132 3e-32
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ... 132 4e-32
sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic ... 132 4e-32
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ... 131 1e-31
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ... 131 1e-31
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 130 2e-31
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ... 130 2e-31
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ... 129 3e-31
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ... 129 3e-31
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 134 3e-31
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 130 4e-31
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 130 4e-31
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 130 4e-31
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 130 4e-31
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop... 130 4e-31
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 130 5e-31
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 129 6e-31
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 129 1e-30
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ... 125 2e-30
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ... 123 3e-30
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 125 5e-30
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 129 8e-30
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ... 124 1e-29
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ... 119 3e-29
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho... 124 3e-29
sp|Q54BM2|PABPB_DICDI Polyadenylate-binding protein 1-B OS=Dicty... 123 4e-29
>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2
Length = 653
Score = 130 bits (328), Expect(2) = 2e-32
Identities = 63/101 (62%), Positives = 80/101 (79%)
Frame = +2
Query: 203 APTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADES 382
APT+ASLYVG+LD +V EA L++LF+ +GPVASIRVCRD+V+RRSLGYAYVNF+ D
Sbjct: 76 APTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMED-- 133
Query: 383 AAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
+AL+ LN+T + G+ RIMWS RDPS RK G GN+F+K
Sbjct: 134 -GEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIK 173
Score = 29.3 bits (64), Expect(2) = 2e-32
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS GKILSCK
Sbjct: 182 KALHDTFSAFGKILSCK 198
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus terreus (strain NIH 2624) GN=pab1
PE=3 SV=1
Length = 753
Score = 133 bits (334), Expect(2) = 3e-32
Identities = 66/104 (63%), Positives = 81/104 (77%)
Frame = +2
Query: 194 SVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASA 373
S P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +A
Sbjct: 41 STSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 100
Query: 374 DESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
D RALE LN+T + GK RIMWS RDP+ RK+G GN+F+K
Sbjct: 101 D---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 141
Score = 26.2 bits (56), Expect(2) = 3e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 150 KALHDTFAAFGNILSCK 166
>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1
Length = 753
Score = 133 bits (334), Expect(2) = 3e-32
Identities = 66/104 (63%), Positives = 81/104 (77%)
Frame = +2
Query: 194 SVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASA 373
S P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +A
Sbjct: 45 SASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 374 DESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
D RALE LN+T + GK RIMWS RDP+ RK+G GN+F+K
Sbjct: 105 D---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 145
Score = 26.2 bits (56), Expect(2) = 3e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 154 KALHDTFAAFGNILSCK 170
Score = 35.8 bits (81), Expect = 0.16
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++Y+ ++D V + + +F + G + S + RD + S G+ +VNF+ AAV
Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHDSAQAAV-- 290
Query: 398 LESLNFTPLNGKAIRI 445
+ +N + G+ + +
Sbjct: 291 -DEMNDKEIKGQKLYV 305
Score = 32.3 bits (72), Expect = 1.8
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVS 328
+LYV +L +V + +L +LFS G + S +V RD+V+
Sbjct: 337 NLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVT 373
>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181) GN=pab1 PE=3 SV=1
Length = 751
Score = 132 bits (333), Expect(2) = 3e-32
Identities = 66/104 (63%), Positives = 81/104 (77%)
Frame = +2
Query: 194 SVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASA 373
S P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +A
Sbjct: 45 SANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTA 104
Query: 374 DESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
D RALE LN+T + GK RIMWS RDP+ RK+G GN+F+K
Sbjct: 105 D---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 145
Score = 26.2 bits (56), Expect(2) = 3e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 154 KALHDTFAAFGNILSCK 170
Score = 35.8 bits (81), Expect = 0.16
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++Y+ ++D V + + +F + G + S + RD + S G+ +VNF+ AAV
Sbjct: 234 NVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHDSAQAAV-- 290
Query: 398 LESLNFTPLNGKAIRI 445
+ +N + G+ + +
Sbjct: 291 -DEMNDKEIKGQKLYV 305
Score = 32.3 bits (72), Expect = 1.8
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVS 328
+LYV +L +V + +L +LFS G + S +V RD+V+
Sbjct: 337 NLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVT 373
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=pab1 PE=3 SV=1
Length = 731
Score = 132 bits (333), Expect(2) = 3e-32
Identities = 68/109 (62%), Positives = 83/109 (76%), Gaps = 5/109 (4%)
Frame = +2
Query: 194 SVPAPT-----TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVN 358
S PAP +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN
Sbjct: 42 STPAPAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVN 101
Query: 359 FNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
+N +AD RALE LN+T + GK RIMWS RDP+ RK+G GN+F+K
Sbjct: 102 YNNTAD---GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 147
Score = 26.2 bits (56), Expect(2) = 3e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 156 KALHDTFAAFGNILSCK 172
Score = 38.1 bits (87), Expect = 0.032
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++++ +LDS + L+D F+ G + S +V +D S GY +V++ + AA A
Sbjct: 143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFG-NSKGYGFVHYETA---EAANNA 198
Query: 398 LESLNFTPLNGKAIRI--MWSHRDPSSR----KSGLGNLFVK 505
++ +N LN K + + S +D S+ K+ N+++K
Sbjct: 199 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIK 240
Score = 36.6 bits (83), Expect = 0.093
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++Y+ +LDS + + + +F + G + S + RD + S G+ +VNF+ AAV
Sbjct: 236 NVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAVEE 294
Query: 398 L 400
+
Sbjct: 295 M 295
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1
Length = 765
Score = 132 bits (332), Expect(2) = 4e-32
Identities = 65/100 (65%), Positives = 80/100 (80%)
Frame = +2
Query: 206 PTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESA 385
P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +AD
Sbjct: 46 PHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTAD--- 102
Query: 386 AVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
RALE LN+T + GK RIMWS RDP+ RK+G GN+F+K
Sbjct: 103 GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 142
Score = 26.2 bits (56), Expect(2) = 4e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 151 KALHDTFAAFGNILSCK 167
Score = 38.9 bits (89), Expect = 0.019
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAV 391
++Y+ ++D +V E + +LF + G + S + RD + S G+ +VNF+ AAV
Sbjct: 231 NVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGK-SRGFGFVNFSTHESAQAAV 287
Score = 38.1 bits (87), Expect = 0.032
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++++ +LDS + L+D F+ G + S +V +D S GY +V++ + AA A
Sbjct: 138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFG-NSKGYGFVHYETA---EAANNA 193
Query: 398 LESLNFTPLNGKAIRI--MWSHRDPSSR----KSGLGNLFVK 505
++ +N LN K + + S +D S+ K+ N+++K
Sbjct: 194 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIK 235
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1
Length = 754
Score = 132 bits (332), Expect(2) = 4e-32
Identities = 65/100 (65%), Positives = 80/100 (80%)
Frame = +2
Query: 206 PTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESA 385
P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N +AD
Sbjct: 48 PHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTAD--- 104
Query: 386 AVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
RALE LN+T + GK RIMWS RDP+ RK+G GN+F+K
Sbjct: 105 GERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 144
Score = 26.2 bits (56), Expect(2) = 4e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 153 KALHDTFAAFGNILSCK 169
Score = 38.5 bits (88), Expect = 0.024
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++++ +LDS + L+D F+ G + S +V +D S GY +V++ + AA A
Sbjct: 140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFG-NSKGYGFVHYETA---EAANNA 195
Query: 398 LESLNFTPLNGKAIRI--MWSHRDPSSR----KSGLGNLFVK 505
++ +N LN K + + S +D S+ K+ N+++K
Sbjct: 196 IKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIK 237
Score = 30.0 bits (66), Expect = 8.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDS 322
+LYV +L +V + +L +LF G + S +V RDS
Sbjct: 336 NLYVKNLTDDVDDEKLRELFGPYGTITSAKVMRDS 370
>sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1
Length = 783
Score = 131 bits (329), Expect(2) = 1e-31
Identities = 66/122 (54%), Positives = 91/122 (74%), Gaps = 1/122 (0%)
Frame = +2
Query: 143 GEVFAAPGNWRGGGVMASVPAP-TTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRD 319
GE A + G ++ P P ++ASLYVG+LD +V EA L++LFSQ+G VASIRVCRD
Sbjct: 40 GEYQTADPDTAGPTPSSAAPHPQSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRD 99
Query: 320 SVSRRSLGYAYVNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLF 499
+++RRSLGYAYVN+N+++D +ALE LN+T + G+ RIMWS RDP+ RK+G GN+F
Sbjct: 100 TITRRSLGYAYVNYNSTSD---GEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVF 156
Query: 500 VK 505
+K
Sbjct: 157 IK 158
Score = 26.2 bits (56), Expect(2) = 1e-31
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 167 KALHDTFAAFGNILSCK 183
Score = 39.3 bits (90), Expect = 0.014
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++YV ++ + + DLF++ G V S + RDS +S G+ +VNF A +A
Sbjct: 247 NIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDS-EGKSRGFGFVNFTT---HECAAKA 302
Query: 398 LESLNFTPLNGKAIRI 445
+E LN G+ + +
Sbjct: 303 VEELNGKEFRGQDLYV 318
Score = 34.3 bits (77), Expect = 0.46
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRS 337
+LY+ +L ++ + +L +FS+ GP+ S +V RD+V+ S
Sbjct: 350 NLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGS 389
>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Neurospora crassa GN=pab-1 PE=3 SV=1
Length = 764
Score = 131 bits (329), Expect(2) = 1e-31
Identities = 74/144 (51%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 77 AETCPSLSRDVPKKQALGVSK*GEVFAAPGNWRGGGVMASVPAP-TTASLYVGDLDSNVA 253
A P + VP+ QA G AAP + P P +ASLYVG+LD +V
Sbjct: 26 AAPAPIDTSAVPEAQAEGAE------AAP-------TPTAAPHPQASASLYVGELDPSVT 72
Query: 254 EAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRALESLNFTPLNGK 433
EA L++LFSQ+G VASIRVCRD+V+RRSLGYAYVN+N +AD +ALE LN+T + G+
Sbjct: 73 EAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTAD---GEKALEELNYTLIKGR 129
Query: 434 AIRIMWSHRDPSSRKSGLGNLFVK 505
RIMWS RDP+ RK+G GN+F+K
Sbjct: 130 PCRIMWSQRDPALRKTGAGNIFIK 153
Score = 26.2 bits (56), Expect(2) = 1e-31
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 162 KALHDTFAAFGNILSCK 178
Score = 38.9 bits (89), Expect = 0.019
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++YV ++++ V + + +LF++ G V S + RD +S G+ +VNF AA +A
Sbjct: 242 NVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQ-EGKSRGFGFVNFTT---HEAAAQA 297
Query: 398 LESLNFTPLNGKAIRI 445
++ LN G+ + +
Sbjct: 298 VDELNGKDFRGQDLYV 313
Score = 33.1 bits (74), Expect = 1.0
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSV 325
+LY+ +L +V + +L +FS+ GP+ S +V RDS+
Sbjct: 345 NLYIKNLGDDVDDDKLRAMFSEYGPITSAKVMRDSL 380
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2
Length = 732
Score = 130 bits (327), Expect(2) = 2e-31
Identities = 64/105 (60%), Positives = 81/105 (77%)
Frame = +2
Query: 191 ASVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNAS 370
A+ P +ASLYVG+LD +V EA LY+LFS +G VASIRVCRD+V+RRSLGYAYVN+N
Sbjct: 34 ATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYN-- 91
Query: 371 ADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
D + RAL+ LN+T + GK RIMWS RDP+ RK+G GN+F+K
Sbjct: 92 -DTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIK 135
Score = 26.2 bits (56), Expect(2) = 2e-31
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 144 KALHDTFAAFGNILSCK 160
Score = 37.7 bits (86), Expect = 0.042
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++Y+ ++D V + + LF + G + S + RDS +S G+ +VNF+ AAV
Sbjct: 224 NIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDS-EGKSRGFGFVNFSTHESAQAAVEE 282
Query: 398 L 400
+
Sbjct: 283 M 283
Score = 37.4 bits (85), Expect = 0.054
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++++ +LDS + L+D F+ G + S +V +D S GY +V++ + AA A
Sbjct: 131 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFG-VSKGYGFVHYETA---EAANNA 186
Query: 398 LESLNFTPLNGKAIRI--MWSHRDPSSR----KSGLGNLFVK 505
++ +N LN K + + S +D S+ K+ N+++K
Sbjct: 187 IKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIK 228
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951796|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_F17, 5'
(582 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A8HME6|A8HME6_CHLRE Polyadenylate-binding protein RB47 OS=Chl... 150 3e-37
tr|O64985|O64985_CHLRE Poly(A) binding protein RB47 OS=Chlamydom... 150 3e-37
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten... 141 9e-34
tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten... 140 2e-33
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu... 136 1e-32
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 138 1e-32
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos... 136 2e-32
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten... 136 3e-32
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma... 136 4e-32
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos... 134 6e-32
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs... 134 8e-32
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza... 134 8e-32
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ... 134 8e-32
tr|Q6Z050|Q6Z050_ORYSJ Os08g0314800 protein OS=Oryza sativa subs... 135 2e-31
tr|Q6UUN6|Q6UUN6_ORYSJ Putative poly(A)-binding protein (Putativ... 135 2e-31
tr|A2YTU1|A2YTU1_ORYSI Putative uncharacterized protein OS=Oryza... 135 2e-31
tr|B0XND2|B0XND2_ASPFC Polyadenylate-binding protein OS=Aspergil... 133 3e-31
tr|B2CJ74|B2CJ74_9HYPO Poly(A) RNA binding protein OS=Epichloe f... 133 3e-31
tr|B2AQY9|B2AQY9_PODAN Predicted CDS Pa_4_9240 OS=Podospora anse... 132 5e-31
tr|B6H844|B6H844_PENCH Pc16g09030 protein OS=Penicillium chrysog... 132 5e-31
tr|B8N3I8|B8N3I8_ASPFL Polyadenylate-binding protein OS=Aspergil... 132 5e-31
tr|A7TH03|A7TH03_VANPO Putative uncharacterized protein OS=Vande... 131 5e-31
tr|A6RJZ8|A6RJZ8_BOTFB Putative uncharacterized protein OS=Botry... 132 7e-31
tr|A6RAN8|A6RAN8_AJECN Polyadenylate-binding protein OS=Ajellomy... 131 9e-31
tr|A5C1F3|A5C1F3_VITVI Putative uncharacterized protein OS=Vitis... 129 2e-30
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti... 134 2e-30
tr|B7FM14|B7FM14_MEDTR Putative uncharacterized protein (Fragmen... 132 2e-30
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs... 133 3e-30
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza... 133 3e-30
tr|B8MGJ6|B8MGJ6_9EURO Polyadenylate-binding protein OS=Talaromy... 129 3e-30
>tr|A8HME6|A8HME6_CHLRE Polyadenylate-binding protein RB47
OS=Chlamydomonas reinhardtii GN=RB47 PE=4 SV=1
Length = 636
Score = 150 bits (378), Expect(2) = 3e-37
Identities = 73/114 (64%), Positives = 93/114 (81%), Gaps = 9/114 (7%)
Frame = +2
Query: 191 ASVPAPTT---------ASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLG 343
+S PA TT +SLYVGDL+ +V EAQL++LFS VGPVASIRVCRD+V+RRSLG
Sbjct: 6 SSAPAATTQPASTPLANSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLG 65
Query: 344 YAYVNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
YAYVN+N++ D AA RA+E+LN+ +NGK +RIMWSHRDPS+RKSG+GN+F+K
Sbjct: 66 YAYVNYNSALDPQAADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIK 119
Score = 29.3 bits (64), Expect(2) = 3e-37
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS GKILSCK
Sbjct: 128 KALHDTFSAFGKILSCK 144
Score = 39.3 bits (90), Expect = 0.16
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
+LYV +L V + L +LF+ G + S +V +D S +S G+ +V F S DE A RA
Sbjct: 305 NLYVKNLSDEVDDDALRELFANSGTITSCKVMKDG-SGKSKGFGFVCF-TSHDE--ATRA 360
Query: 398 LESLNFTPLNGKAIRIMWSHR 460
+ +N + GK + + + R
Sbjct: 361 VTEMNGKMVKGKPLYVALAQR 381
>tr|O64985|O64985_CHLRE Poly(A) binding protein RB47
OS=Chlamydomonas reinhardtii GN=PABP PE=2 SV=1
Length = 623
Score = 150 bits (378), Expect(2) = 3e-37
Identities = 73/114 (64%), Positives = 93/114 (81%), Gaps = 9/114 (7%)
Frame = +2
Query: 191 ASVPAPTT---------ASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLG 343
+S PA TT +SLYVGDL+ +V EAQL++LFS VGPVASIRVCRD+V+RRSLG
Sbjct: 6 SSAPAATTQPASTPLANSSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLG 65
Query: 344 YAYVNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
YAYVN+N++ D AA RA+E+LN+ +NGK +RIMWSHRDPS+RKSG+GN+F+K
Sbjct: 66 YAYVNYNSALDPQAADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIK 119
Score = 29.3 bits (64), Expect(2) = 3e-37
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS GKILSCK
Sbjct: 128 KALHDTFSAFGKILSCK 144
>tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_108547 PE=4 SV=1
Length = 647
Score = 141 bits (355), Expect(2) = 9e-34
Identities = 70/105 (66%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
Frame = +2
Query: 200 PAPT---TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNAS 370
PAP + S+YVGDL+ NV+EAQLY++FSQ GPV SIRVCRD ++RRSLGYAYVN++++
Sbjct: 16 PAPNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSA 75
Query: 371 ADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
D A RALE LNFTP+NGK IRIM+SHRDPS RKSG N+F+K
Sbjct: 76 QD---ATRALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIK 117
Score = 26.6 bits (57), Expect(2) = 9e-34
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS G ILSCK
Sbjct: 126 KALHDTFSAFGGILSCK 142
Score = 38.9 bits (89), Expect = 0.21
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++YV +L N + +L +F GP++S V RD+ +S + +VNF + D + AV A
Sbjct: 204 NVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDN-EGKSKCFGFVNFELADDAAKAVEA 262
Query: 398 L 400
L
Sbjct: 263 L 263
Score = 36.6 bits (83), Expect = 1.0
Identities = 23/86 (26%), Positives = 44/86 (51%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
+LY+ +LD V + +L +LF++ G + S +V +D +S G +V F+ + A RA
Sbjct: 307 NLYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDP-QGQSRGSGFVAFSTPEE---ATRA 362
Query: 398 LESLNFTPLNGKAIRIMWSHRDPSSR 475
+ +N + K + + + R R
Sbjct: 363 VTEMNTKMVGSKPLYVALAQRKEERR 388
>tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_124737 PE=4 SV=1
Length = 439
Score = 140 bits (354), Expect(2) = 2e-33
Identities = 73/108 (67%), Positives = 87/108 (80%), Gaps = 3/108 (2%)
Frame = +2
Query: 191 ASVPAPT---TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNF 361
AS PAPT + SLYVGDL+ NV+EAQLY++FSQVG V SIRVCRD ++RRSLGY+YVN+
Sbjct: 13 ASGPAPTQFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNY 72
Query: 362 NASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
N + D A RALE LNFT +NGK IRIM+SHRDPS RKSG N+F+K
Sbjct: 73 NNAQD---ATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIK 117
Score = 26.2 bits (56), Expect(2) = 2e-33
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 126 KALHDTFAAFGNILSCK 142
Score = 38.5 bits (88), Expect = 0.27
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
+LY+ +LD V + ++ +LF++ G + S +V RD +S G +V F +S DE A RA
Sbjct: 307 NLYLKNLDDTVDDEKIRELFAEYGTITSCKVMRDH-QGQSKGSGFVAF-SSPDE--ATRA 362
Query: 398 LESLNFTPLNGKAIRIMWSHRDPSSR 475
+ +N + K + + + R R
Sbjct: 363 VTEMNGKMVGNKPLYVALAQRKEERR 388
Score = 35.4 bits (80), Expect = 2.3
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++YV +L + +L +F GP++S V RD+ +S + +VNF D + AV A
Sbjct: 204 NVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDN-DGKSKCFGFVNFEHPDDAAKAVEA 262
Query: 398 LESLNF 415
L+ F
Sbjct: 263 LQGKKF 268
>tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativus
PE=2 SV=1
Length = 649
Score = 136 bits (343), Expect(2) = 1e-32
Identities = 67/98 (68%), Positives = 78/98 (79%)
Frame = +2
Query: 212 TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAV 391
T SLYVGDLD NV ++QLYDLF+QVG V S+RVCRD SRRSLGY YVN++ D S
Sbjct: 28 TTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDAS--- 84
Query: 392 RALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
RAL+ LNFTPLNG IR+M+SHRDPS RKSG GN+F+K
Sbjct: 85 RALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIK 122
Score = 27.3 bits (59), Expect(2) = 1e-32
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS G ILSCK
Sbjct: 131 KALHDTFSAFGSILSCK 147
Score = 37.7 bits (86), Expect = 0.47
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 215 ASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRD--SVSRRSLGYAYVNFNASADESAA 388
A+LYV +LD ++ + +L +LF+ G + S +V RD +SR S F A + A
Sbjct: 311 ANLYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGS------GFVAFSSPEEA 364
Query: 389 VRALESLNFTPLNGKAIRIMWSHR 460
RAL +N + K + + + R
Sbjct: 365 ARALAEMNGRMIVSKPLYVALAQR 388
>tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_216291 PE=4 SV=1
Length = 645
Score = 138 bits (347), Expect(2) = 1e-32
Identities = 72/108 (66%), Positives = 85/108 (78%), Gaps = 3/108 (2%)
Frame = +2
Query: 191 ASVPAP---TTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNF 361
AS PAP + SLYVGDL+S V+EAQLY++FSQVG V SIRVCRD ++RRSLGYAYVN+
Sbjct: 13 ASGPAPPNFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNY 72
Query: 362 NASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
N + D A RALE LNF +NGK IRIM+SHRDPS RKSG N+F+K
Sbjct: 73 NNAQD---ATRALELLNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIK 117
Score = 25.8 bits (55), Expect(2) = 1e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD F+ G ILSCK
Sbjct: 126 KALHDTFAAFGTILSCK 142
Score = 39.3 bits (90), Expect = 0.16
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
+LY+ +LD + + +L ++FS+ G + S +V RD +S G +V F +S DE A RA
Sbjct: 307 NLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDP-QGQSRGSGFVAF-SSPDE--ATRA 362
Query: 398 LESLNFTPLNGKAIRIMWSHRDPSSR 475
+ +N + K + + + R R
Sbjct: 363 VTEMNGKMVGSKPLYVALAQRKEERR 388
Score = 37.7 bits (86), Expect = 0.47
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++YV +L + + +L +F GP++S V RD+ +S + +VNF + D + AV A
Sbjct: 204 NVYVKNLADSTTDDELKKVFEAYGPISSAVVMRDN-EGKSKCFGFVNFEHADDAAKAVEA 262
Query: 398 LESLNF 415
L F
Sbjct: 263 LNGKKF 268
>tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromosome
chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis
vinifera GN=GSVIVT00036627001 PE=4 SV=1
Length = 648
Score = 136 bits (342), Expect(2) = 2e-32
Identities = 71/115 (61%), Positives = 83/115 (72%)
Frame = +2
Query: 161 PGNWRGGGVMASVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSL 340
PG G A T SLYVGDL+ NV ++QLYDLFSQ+G V S+RVCRD +RRSL
Sbjct: 12 PGPAPNGAAGAGGNQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSL 71
Query: 341 GYAYVNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
GY YVN++ D A RAL+ LNFTPLNGK IRIM+SHRDPS RKSG GN+F+K
Sbjct: 72 GYGYVNYSNPQD---AARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIK 123
Score = 27.3 bits (59), Expect(2) = 2e-32
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS G ILSCK
Sbjct: 132 KALHDTFSAFGNILSCK 148
Score = 41.6 bits (96), Expect = 0.032
Identities = 26/87 (29%), Positives = 47/87 (54%)
Frame = +2
Query: 215 ASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVR 394
A+LY+ +LD ++ + +L +LF+Q G + S +V RD + S G +V F++ + S R
Sbjct: 312 ANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDP-NGLSRGSGFVAFSSPEEAS---R 367
Query: 395 ALESLNFTPLNGKAIRIMWSHRDPSSR 475
AL +N + K + + + R R
Sbjct: 368 ALAEMNSKMVVSKPLYVALAQRKEDRR 394
>tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_170712 PE=4 SV=1
Length = 650
Score = 136 bits (342), Expect(2) = 3e-32
Identities = 70/108 (64%), Positives = 84/108 (77%), Gaps = 3/108 (2%)
Frame = +2
Query: 191 ASVPAPT---TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNF 361
A P P + SLYVGDL+ NV+EAQLY+LF+QVG V SIRVCRD ++RRSLGYAYVN+
Sbjct: 17 AGAPPPAQFVSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNY 76
Query: 362 NASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
N++ D A RALE LNF+ LNG IRIM+SHRDPS RKSG N+F+K
Sbjct: 77 NSAQD---ATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIK 121
Score = 26.6 bits (57), Expect(2) = 3e-32
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS G ILSCK
Sbjct: 130 KALHDTFSAFGGILSCK 146
Score = 37.7 bits (86), Expect = 0.47
Identities = 24/86 (27%), Positives = 44/86 (51%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
+LY+ +LD V + +L +LF+ G + S +V RD +S G +V F++ + A RA
Sbjct: 311 NLYLKNLDDTVDDEKLRELFADYGTITSCKVMRDP-QGQSRGSGFVAFSSPEE---ATRA 366
Query: 398 LESLNFTPLNGKAIRIMWSHRDPSSR 475
+ +N + K + + + R R
Sbjct: 367 VTEMNGKMVGSKPLYVALAQRKEERR 392
Score = 35.0 bits (79), Expect = 3.0
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
++YV +L N E L ++F G ++S V RDS +S + +VNF + + AV A
Sbjct: 208 NVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDS-DGKSKCFGFVNFEHPDNAAKAVEA 266
Query: 398 L 400
L
Sbjct: 267 L 267
>tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea mays
PE=2 SV=1
Length = 660
Score = 136 bits (343), Expect(2) = 4e-32
Identities = 70/110 (63%), Positives = 85/110 (77%)
Frame = +2
Query: 176 GGGVMASVPAPTTASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYV 355
G G+ + P PTT SLYVGDL+ +V+++QLY+LFSQ G V S+RVCRD SRRSLGYAYV
Sbjct: 28 GVGLGVAQPLPTT-SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYV 86
Query: 356 NFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
NFN D A RALE LNF PLN K IR+M+S+RDPSSR+SG N+F+K
Sbjct: 87 NFNNPLD---AARALEVLNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIK 133
Score = 25.8 bits (55), Expect(2) = 4e-32
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LH+ FS G ILSCK
Sbjct: 142 KSLHETFSSFGTILSCK 158
Score = 42.7 bits (99), Expect = 0.015
Identities = 25/81 (30%), Positives = 46/81 (56%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
+LY+ +LD ++ + QL +LFS G + S +V RD + S G +V F+ + S +A
Sbjct: 323 NLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQ-NGLSKGSGFVAFSTREEAS---QA 378
Query: 398 LESLNFTPLNGKAIRIMWSHR 460
L +N ++GK + + ++ R
Sbjct: 379 LTEMNGKMISGKPLYVAFAQR 399
>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00014861001 PE=4 SV=1
Length = 640
Score = 134 bits (337), Expect(2) = 6e-32
Identities = 69/111 (62%), Positives = 82/111 (73%), Gaps = 4/111 (3%)
Frame = +2
Query: 185 VMASVPAPT----TASLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAY 352
+ A+V P TASLYVGDLD N+ ++QLYDLF Q G V S+RVCRD +RRSLGY Y
Sbjct: 4 IQAAVAGPNGVANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGY 63
Query: 353 VNFNASADESAAVRALESLNFTPLNGKAIRIMWSHRDPSSRKSGLGNLFVK 505
VN++ D A RAL+ LNFTPLNGK IRIM+SHRDPS RKSG N+F+K
Sbjct: 64 VNYSNPQD---AARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIK 111
Score = 27.3 bits (59), Expect(2) = 6e-32
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 532 RELHDQFSPIGKILSCK 582
+ LHD FS G ILSCK
Sbjct: 120 KALHDTFSAFGNILSCK 136
Score = 42.0 bits (97), Expect = 0.025
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +2
Query: 218 SLYVGDLDSNVAEAQLYDLFSQVGPVASIRVCRDSVSRRSLGYAYVNFNASADESAAVRA 397
+LY+ +LD ++ + +L +LFS+ G + S +V RD S S G +V F+ S + S A+
Sbjct: 301 NLYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDP-SGISRGSGFVAFSTSEEASRAL-- 357
Query: 398 LESLNFTPLNGKAI 439
T +NGK +
Sbjct: 358 ------TEMNGKMV 365
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