DK951802 |
Clone id |
TST38A01NGRL0012_F23 |
Library |
TST38 |
Length |
614 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_F23. 5' end sequence. |
Accession |
DK951802 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL442Contig1 |
Sequence |
GAAAGACCTTGGACCTCAAGTCAAGTACTCAACACTCTTCTTTTTTGAGTATTTGGGTCC TCTCTTCATCTATCCTCTGTTCTATTTCTTACCCCTTTACAAGTATGTTGGCCTACCAGA GGAGCGCGTGATACATCCAGTTCAAACTTATGCCACCATTTATTGGTGTTTCCATTACTT CAAGCGCATCATGGAGACCTTCTTTGTGCACAGATTTAGCCATGCCACATCTCCATTGAG TAACGTATTCAGAAATTGTTGTTACTACTGGTCTTTTGCAGTATTTATTGCCTACTTTGT CAACCATCCATACTATACAACAGTTGGCGAAACACAAATGTACATTGGATTTGGCTTGGG CATTGTGTGTCAGCTCGCCAATTTCTACTGCCACATTATATTGAAGAACCTCAGATCTCC TGATGGGAAGGGGGGCTACCAAATCCCTAGAGGGTTTCTCTTCAATTTTGTCACTTGTGC AAACTATACCACCGAGATCTATCAATGGGTGGGCTTCAACATTGCGACTCAGACGGTCGC AGGATACTCTTTCCTGGTTGTTGCTGCTTATATAATGTCAGAGTGGGCTCTTGGGAAGCA CCGCAGGTTGAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q55C17 |
Definition |
sp|Q55C17|GPSN2_DICDI Trans-2,3-enoyl-CoA reductase OS=Dictyostelium discoideum |
Align length |
204 |
Score (bit) |
178.0 |
E-value |
2.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951802|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_F23, 5' (614 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q55C17|GPSN2_DICDI Trans-2,3-enoyl-CoA reductase OS=Dictyoste... 178 2e-44 sp|Q9NZ01|GPSN2_HUMAN Synaptic glycoprotein SC2 OS=Homo sapiens ... 150 5e-36 sp|Q3ZCD7|GPSN2_BOVIN Synaptic glycoprotein SC2 OS=Bos taurus GN... 150 5e-36 sp|Q64232|GPSN2_RAT Synaptic glycoprotein SC2 OS=Rattus norvegic... 150 7e-36 sp|Q9CY27|GPSN2_MOUSE Synaptic glycoprotein SC2 OS=Mus musculus ... 149 9e-36 sp|Q5HYJ1|S5A2M_HUMAN Steroid 5-alpha-reductase 2-like 2 protein... 118 2e-26 sp|Q3SZ89|S5A2M_BOVIN Steroid 5-alpha-reductase 2-like 2 protein... 115 1e-25 sp|Q8BFZ1|S5A2M_MOUSE Steroid 5-alpha-reductase 2-like 2 protein... 111 3e-24 sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizo... 101 3e-21 sp|Q99190|TSC13_YEAST Enoyl reductase TSC13 OS=Saccharomyces cer... 88 4e-17 sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=... 72 2e-12 sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Ra... 71 4e-12 sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=... 71 5e-12 sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=... 71 5e-12 sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=... 67 7e-11 sp|Q28892|S5A2_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=... 59 2e-08 sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=... 58 4e-08 sp|P31214|S5A2_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Ra... 57 8e-08 sp|O18765|S5A2_PIG 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Su... 57 8e-08 sp|Q99N99|S5A2_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=... 55 4e-07 sp|Q38944|DET2_ARATH Probable steroid reductase DET2 OS=Arabidop... 49 3e-05 sp|Q9UT20|YFY8_SCHPO Uncharacterized protein C9.08c OS=Schizosac... 42 0.003 sp|Q0P4J9|S5A3_XENTR 3-oxo-5-alpha-steroid 4-dehydrogenase 3 OS=... 39 0.028 sp|P40526|DFG10_YEAST Protein DFG10 OS=Saccharomyces cerevisiae ... 38 0.047 sp|Q9WUP4|S5A3_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 3 OS=... 37 0.081 sp|Q8AVI9|S5A3_XENLA 3-oxo-5-alpha-steroid 4-dehydrogenase 3 OS=... 35 0.31 sp|A9GZR7|PYRB_GLUDA Aspartate carbamoyltransferase OS=Gluconace... 35 0.40 sp|Q8IUH8|IMP5_HUMAN Signal peptide peptidase-like 2C OS=Homo sa... 34 0.68 sp|Q5FRG8|PYRB_GLUOX Aspartate carbamoyltransferase OS=Gluconoba... 33 1.5 sp|P28873|BMRP_CANAL Benomyl/methotrexate resistance protein OS=... 32 2.0
>sp|Q55C17|GPSN2_DICDI Trans-2,3-enoyl-CoA reductase OS=Dictyostelium discoideum GN=gpsn2 PE=3 SV=1 Length = 300
Score = 178 bits (451), Expect = 2e-44 Identities = 89/204 (43%), Positives = 118/204 (57%) Frame = +2
Query: 2 KDLGPQVKYSTLFFFEXXXXXXXXXXXXXXXXXXXVGLPEERVIHPVQTYATIYWCFHYF 181 KDLGPQ+ +S +F E G + Q A + + HY Sbjct: 82 KDLGPQISWSLVFICEYAGPLFVYPIFYFLSNLIY-GTDSPKSF--AQKVALVCYSLHYI 138
Query: 182 KRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPYYTTVGETQMYIGFGLG 361 KRI ET FVHRFSH T P+ N+F+NC YYW ++YFVNHP YT ++Y+G GL Sbjct: 139 KRIYETIFVHRFSHGTMPIFNLFKNCSYYWGCTAMVSYFVNHPLYTEAPIERVYLGLGLW 198
Query: 362 IVCQLANFYCHIILKNLRSPDGKGGYQIPRGFLFNFVTCANYTTEIYQWVGFNIATQTVA 541 I+ ++ N+ CHI L+NLR P G +IPRG LF FV+C NYT EI W+GF+I TQT+ Sbjct: 199 IIGEVFNYICHIQLRNLR-PAGSTERKIPRGLLFEFVSCPNYTVEILSWIGFSILTQTLT 257
Query: 542 GYSFLVVAAYIMSEWALGKHRRLK 613 + F ++ A M WA+GKHRR + Sbjct: 258 SWIFALMGAAQMWIWAVGKHRRYR 281
>sp|Q9NZ01|GPSN2_HUMAN Synaptic glycoprotein SC2 OS=Homo sapiens GN=GPSN2 PE=1 SV=1 Length = 308
Score = 150 bits (379), Expect = 5e-36 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 8/165 (4%) Frame = +2
Query: 134 HPVQTYATIYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPY 313 H V A I FHY KR++ET FVHRFSH T PL N+F+NC YYW FA ++AY++NHP Sbjct: 124 HTVVHLACICHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPL 183
Query: 314 YT--TVGETQMYIGFGLGIVCQLANFYCHIILKNLRSPDGKGGYQIPR------GFLFNF 469 YT T G Q+ + + ++CQL NF H+ L++LR P G +IP +LF Sbjct: 184 YTPPTYGAQQVKLALAIFVICQLGNFSIHMALRDLR-PAGSKTRKIPYPTKNPFTWLFLL 242
Query: 470 VTCANYTTEIYQWVGFNIATQTVAGYSFLVVAAYIMSEWALGKHR 604 V+C NYT E+ W+GF I TQ + F +V M+ WA GKHR Sbjct: 243 VSCPNYTYEVGSWIGFAIMTQCLPVALFSLVGFTQMTIWAKGKHR 287
>sp|Q3ZCD7|GPSN2_BOVIN Synaptic glycoprotein SC2 OS=Bos taurus GN=GPSN2 PE=2 SV=1 Length = 308
Score = 150 bits (379), Expect = 5e-36 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 8/165 (4%) Frame = +2
Query: 134 HPVQTYATIYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPY 313 H V A I FHY KR++ET FVHRFSH T PL N+F+NC YYW FA ++AY++NHP Sbjct: 124 HTVVHLACICHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPL 183
Query: 314 YT--TVGETQMYIGFGLGIVCQLANFYCHIILKNLRSPDGKGGYQIPR------GFLFNF 469 YT T G Q+ + + ++CQL NF H+ L++LR P G +IP +LF Sbjct: 184 YTPPTYGAQQVKLALAIFVICQLGNFSIHMALRDLR-PAGSKTRKIPYPTRNPFTWLFLL 242
Query: 470 VTCANYTTEIYQWVGFNIATQTVAGYSFLVVAAYIMSEWALGKHR 604 V+C NYT E+ W+GF I TQ + F +V M+ WA GKHR Sbjct: 243 VSCPNYTYEVGSWIGFAIMTQCLPVALFSLVGFTQMTIWAKGKHR 287
>sp|Q64232|GPSN2_RAT Synaptic glycoprotein SC2 OS=Rattus norvegicus GN=Gpsn2 PE=2 SV=1 Length = 308
Score = 150 bits (378), Expect = 7e-36 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 8/165 (4%) Frame = +2
Query: 134 HPVQTYATIYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPY 313 H V A + FHY KR++ET FVHRFSH T PL N+F+NC YYW FA ++AY++NHP Sbjct: 124 HTVVHLACMCHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPL 183
Query: 314 YT--TVGETQMYIGFGLGIVCQLANFYCHIILKNLRSPDGKGGYQIPR------GFLFNF 469 YT T G Q+ + + ++CQL NF H+ L++LR P G +IP +LF Sbjct: 184 YTPPTYGVQQVKLALAIFVICQLGNFSIHMALRDLR-PAGSKTRKIPYPTKNPFTWLFLL 242
Query: 470 VTCANYTTEIYQWVGFNIATQTVAGYSFLVVAAYIMSEWALGKHR 604 V+C NYT E+ W+GF I TQ V F +V M+ WA GKHR Sbjct: 243 VSCPNYTYEVGSWIGFAIMTQCVPVALFSLVGFTQMTIWAKGKHR 287
>sp|Q9CY27|GPSN2_MOUSE Synaptic glycoprotein SC2 OS=Mus musculus GN=Gpsn2 PE=1 SV=1 Length = 308
Score = 149 bits (377), Expect = 9e-36 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 8/165 (4%) Frame = +2
Query: 134 HPVQTYATIYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPY 313 H V A + FHY KR++ET FVHRFSH T PL N+F+NC YYW FA ++AY++NHP Sbjct: 124 HTVVHLACMCHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPL 183
Query: 314 YT--TVGETQMYIGFGLGIVCQLANFYCHIILKNLRSPDGKGGYQIPR------GFLFNF 469 YT T G Q+ + + ++CQL NF H+ L++LR P G +IP +LF Sbjct: 184 YTPPTYGVQQVKLALAVFVICQLGNFSIHMALRDLR-PAGSKTRKIPYPTKNPFTWLFLL 242
Query: 470 VTCANYTTEIYQWVGFNIATQTVAGYSFLVVAAYIMSEWALGKHR 604 V+C NYT E+ W+GF I TQ V F +V M+ WA GKHR Sbjct: 243 VSCPNYTYEVGSWIGFAILTQCVPVALFSLVGFTQMTIWAKGKHR 287
>sp|Q5HYJ1|S5A2M_HUMAN Steroid 5-alpha-reductase 2-like 2 protein OS=Homo sapiens GN=SRD5A2L2 PE=2 SV=1 Length = 363
Score = 118 bits (296), Expect = 2e-26 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 7/207 (3%) Frame = +2
Query: 5 DLGPQVKYSTLFFFEXXXXXXXXXXXXXXXXXXXVGLPEERVI-HPVQTYATIYWCFHYF 181 DLG QV ++T+F E G R + HPV A C HY Sbjct: 136 DLGQQVSWTTVFLAEYTGPLLIYLLFYLRIPCIYDGKESARRLRHPVVHLACFCHCIHYI 195
Query: 182 KRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPYYT--TVGETQMYIGFG 355 + ++ET FVH+ S +PL N+ +C +YW F +IAY++NHP YT + G Q+ + Sbjct: 196 RYLLETLFVHKVSAGHTPLKNLIMSCAFYWGFTSWIAYYINHPLYTPPSFGNRQITVSAI 255
Query: 356 LGIVCQLANFYCHIILKNLRSPDGKGGYQIPR----GFLFNFVTCANYTTEIYQWVGFNI 523 ++C+ N + +++L + + P ++F V+C NYT EI W+ F + Sbjct: 256 NFLICEAGNHFINVMLSHPNHTGNNACFPSPNYNPFTWMFFLVSCPNYTYEIGSWISFTV 315
Query: 524 ATQTVAGYSFLVVAAYIMSEWALGKHR 604 TQT+ F ++ + MS WA KH+ Sbjct: 316 MTQTLPVGIFTLLMSIQMSLWAQKKHK 342
>sp|Q3SZ89|S5A2M_BOVIN Steroid 5-alpha-reductase 2-like 2 protein OS=Bos taurus GN=SRD5A2L2 PE=2 SV=1 Length = 363
Score = 115 bits (289), Expect = 1e-25 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 7/207 (3%) Frame = +2
Query: 5 DLGPQVKYSTLFFFEXXXXXXXXXXXXXXXXXXX-VGLPEERVIHPVQTYATIYWCFHYF 181 DLG QV ++T+F E + R+ HPV A C HY Sbjct: 136 DLGQQVSWTTVFLAEYTGPLLIYLLFYLRIPYIYNMKESSRRLCHPVVHLACFCHCIHYI 195
Query: 182 KRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPYYT--TVGETQMYIGFG 355 + ++ET FVH+ S + L N+ ++C +YW F +IAY++NHP YT + G Q+ I Sbjct: 196 RYLLETLFVHKVSSGHTSLKNLLKSCAFYWGFTSWIAYYINHPRYTPPSFGYRQVAISAI 255
Query: 356 LGIVCQLANFYCHIILKNLRSPDGKGGYQIPR----GFLFNFVTCANYTTEIYQWVGFNI 523 ++C+ N + +++L + + P ++F V+C NYT EI W+ F I Sbjct: 256 NFLICEAGNHFINVVLSHPSHTGNNACFPSPNYNPFTWMFFLVSCPNYTYEIGSWISFTI 315
Query: 524 ATQTVAGYSFLVVAAYIMSEWALGKHR 604 TQT+ F ++ + MS WA KH+ Sbjct: 316 MTQTLPVGIFTLLMSIQMSLWAKKKHK 342
>sp|Q8BFZ1|S5A2M_MOUSE Steroid 5-alpha-reductase 2-like 2 protein OS=Mus musculus GN=Srd5a2l2 PE=2 SV=1 Length = 361
Score = 111 bits (277), Expect = 3e-24 Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 6/163 (3%) Frame = +2
Query: 134 HPVQTYATIYWCFHYFKRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAYFVNHPY 313 HPV A C HY + ++ET FVH+ S SP+ N+ + C +YW F ++AY++NHP Sbjct: 178 HPVVHLAFFCHCIHYIRLLLETLFVHKVSTGHSPMKNLIKGCAFYWGFTSWMAYYINHPR 237
Query: 314 YT--TVGETQMYIGFGLGIVCQLANFYCHIILKNLRSPDGKGGYQIPR----GFLFNFVT 475 YT + G Q+ + + C+ N + + +L + + P +LF V+ Sbjct: 238 YTPPSFGNRQVIVSAINFLFCEAGNHFINTVLAHPNHTGSNACFPSPNYNPFTWLFFLVS 297
Query: 476 CANYTTEIYQWVGFNIATQTVAGYSFLVVAAYIMSEWALGKHR 604 C NYT EI W+ F + TQT+ F ++ MS WA KH+ Sbjct: 298 CPNYTYEIGSWISFTVMTQTLPVGIFTILMTIQMSLWARKKHK 340
>sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizosaccharomyces pombe GN=SPBC646.07c PE=2 SV=1 Length = 295
Score = 101 bits (252), Expect = 3e-21 Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 6/208 (2%) Frame = +2
Query: 2 KDLGPQVKYSTLFFFEXXXXXXXXXXXXXXXXXXXVGLPEERVIHPVQTYATIYWCFHYF 181 KDLGPQ+ + T+F E ++ + Q A + H+ Sbjct: 75 KDLGPQIGWRTVFMIEYLGPLVIHLFFILNYKWIY---RKDYNLCLNQKIAFVLVMLHFM 131
Query: 182 KRIMETFFVHRFSHATSPLSNVFRNCCYYWSFA-VFIAYFVNHPYYTTVGETQ-----MY 343 KR E+ FVHRFS AT PL N+F+NC +Y + +F+AYF+ P++ + Sbjct: 132 KREYESIFVHRFSLATMPLRNIFKNCAHYHLLSGLFLAYFIYGPWHANDYIKPNHLLFLI 191
Query: 344 IGFGLGIVCQLANFYCHIILKNLRSPDGKGGYQIPRGFLFNFVTCANYTTEIYQWVGFNI 523 +G+ + L+NF HIIL++LR P G IP G+ FN V+ NY E W+ F + Sbjct: 192 VGWAFAV---LSNFRTHIILRDLR-PAGSKKRVIPTGYGFNLVSFPNYFFESLGWLFFAL 247
Query: 524 ATQTVAGYSFLVVAAYIMSEWALGKHRR 607 T++ A + FL V + M WA KH R Sbjct: 248 LTKSWASWIFLFVGSAQMFVWAKKKHAR 275
>sp|Q99190|TSC13_YEAST Enoyl reductase TSC13 OS=Saccharomyces cerevisiae GN=TSC13 PE=1 SV=1 Length = 310
Score = 87.8 bits (216), Expect = 4e-17 Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 20/222 (9%) Frame = +2
Query: 2 KDLGPQVKYSTLFFFEXXXXXXXXXXXXXXXXXXXVGLPEERVIHPVQTYATIYWCF--- 172 KDLGPQ+ + +FF E V + F Sbjct: 76 KDLGPQISWRLVFFCEYLGPVLVHSLFYYLSTIPTVVDRWHSASSDYNPFLNRVAYFLIL 135
Query: 173 -HYFKRIMETFFVHRFSHATSPLSNVFRNCCYYWSFAVFIAY--------FVN---HPYY 316 HY KR+ ET FVH+FS AT P+ N+F+NC +YW + I++ F N YY Sbjct: 136 GHYGKRLFETLFVHQFSLATMPIFNLFKNCFHYWVLSGLISFGYFGYGFPFGNAKLFKYY 195
Query: 317 TTVGETQMYIGFGLGIVCQLANFYCHIILK---NLRSPDGKGGYQIP-RGFLFNFVTCAN 484 + + + GL ++ +L NFYCHI L+ + + G ++P +FN N Sbjct: 196 SYLKLDDLSTLIGLFVLSELWNFYCHIKLRLWGDYQKKHGNAKIRVPLNQGIFNLFVAPN 255
Query: 485 YTTEIYQWVGFNIATQ-TVAGYSFLVVAAYIMSEWALGKHRR 607 YT E++ W+ F + + FL V+ M WA K+++ Sbjct: 256 YTFEVWSWIWFTFVFKFNLFAVLFLTVSTAQMYAWAQKKNKK 297
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9XUG8 |
Definition |
tr|A9XUG8|A9XUG8_GOSHI Trans-2-enoyl-CoA reductase OS=Gossypium hirsutum |
Align length |
204 |
Score (bit) |
329.0 |
E-value |
7.0e-89 |
Report |
|