DK951817 |
Clone id |
TST38A01NGRL0012_G14 |
Library |
TST38 |
Length |
590 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_G14. 5' end sequence. |
Accession |
DK951817 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL64Contig1 |
Sequence |
GCAGGCTAGTCTGCGTTTTCCTGCGATCGTAGCTCGCCGGGTCAAGCAGCAGCCATGGTG CTTTCTCAAAAGGAAGCCGATATCCAAATGATGCTTGCTGCCGATGTGCACCTCGGCACG AAGAATTGCGATTTTCAGATGGAGCGTTACGTGTGGAAGCGTCGATCTGACGGAATTTTT ATCATCAATGTAGGAAAAACATGGGACAAGCTGGAGTTGGCAGCGAGAGTGATTGTCGCT ATTGAAAATCCTCAGGATATTATTGTTCAATCTGCCAGGCCCTATGGTCAGAGGGCAGTA TTAAAATTCGCTCAATACACTGGTGCTCAGGCGATTGCTGGACGTCACACTCCAGGAACG TTTACCAATCAGCTTCAGAACACGTTTTGTGAGCCTCGGCTCTTGATTTTGACAGACCCA CGTACTGATCATCAGCCTATCAAAGAGGCTGCGCTTGGAAACATCCCTATTATTGCATTT TGTGACACAGATTCCCCCATGCGCCATGTGGACATTGGTATCCCTGCTAATAACAAGGGG GGAAGCACAGTATCGGTTGTCTTTTTTTGGATGCTAGCTCGCATGGTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O22518 |
Definition |
sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max |
Align length |
176 |
Score (bit) |
315.0 |
E-value |
1.0e-85 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4G194 |
Definition |
tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays |
Align length |
186 |
Score (bit) |
319.0 |
E-value |
8.0e-86 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951817|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_G14, 5' (590 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 319 8e-86 tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subs... 318 1e-85 tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza... 318 1e-85 tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea... 318 2e-85 tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea... 317 2e-85 tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza... 317 3e-85 tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 315 9e-85 tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza s... 315 2e-84 tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert seque... 315 2e-84 tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expre... 315 2e-84 tr|B4FSQ4|B4FSQ4_MAIZE Putative uncharacterized protein OS=Zea m... 315 2e-84 tr|A2XD89|A2XD89_ORYSI Putative uncharacterized protein OS=Oryza... 315 2e-84 tr|B4FTD2|B4FTD2_MAIZE Putative uncharacterized protein OS=Zea m... 314 2e-84 tr|B6SSF3|B6SSF3_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 314 3e-84 tr|B4FZ84|B4FZ84_MAIZE Putative uncharacterized protein OS=Zea m... 314 3e-84 tr|B6T6X2|B6T6X2_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 313 5e-84 tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 313 5e-84 tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medic... 313 6e-84 tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella paten... 313 6e-84 tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella paten... 313 6e-84 tr|B6TIC4|B6TIC4_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2... 311 2e-83 tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment) OS=Physcomit... 311 2e-83 tr|A9P801|A9P801_POPTR Putative uncharacterized protein OS=Popul... 308 1e-82 tr|A7P6D1|A7P6D1_VITVI Chromosome chr9 scaffold_7, whole genome ... 308 1e-82 tr|A5BUU4|A5BUU4_VITVI Putative uncharacterized protein OS=Vitis... 308 1e-82 tr|Q308A0|Q308A0_SOLTU P40-like protein OS=Solanum tuberosum PE=... 308 1e-82 tr|A9P891|A9P891_POPTR Putative uncharacterized protein OS=Popul... 307 3e-82 tr|Q2V4D3|Q2V4D3_ARATH Uncharacterized protein At1g72370.2 OS=Ar... 306 4e-82 tr|A9P906|A9P906_POPTR Putative uncharacterized protein OS=Popul... 306 6e-82 tr|A9PC77|A9PC77_POPTR Putative uncharacterized protein OS=Popul... 304 3e-81
>tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 319 bits (817), Expect = 8e-86 Identities = 157/186 (84%), Positives = 171/186 (91%) Frame = +1
Query: 31 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 210 +S G A LSQKE DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTWDK Sbjct: 3 ASAGGGAVRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDK 62
Query: 211 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 390 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 391 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFW 570 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG +++ + FW Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCL-FW 181
Query: 571 MLARMV 588 +LARMV Sbjct: 182 LLARMV 187
>tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subsp. japonica GN=B1056G08.113 PE=2 SV=2 Length = 305
Score = 318 bits (815), Expect = 1e-85 Identities = 156/186 (83%), Positives = 172/186 (92%) Frame = +1
Query: 31 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 210 ++ G AAA LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 211 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 390 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 391 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFW 570 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG ++ + FW Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCL-FW 180
Query: 571 MLARMV 588 +LARMV Sbjct: 181 LLARMV 186
>tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26872 PE=3 SV=1 Length = 305
Score = 318 bits (815), Expect = 1e-85 Identities = 156/186 (83%), Positives = 172/186 (92%) Frame = +1
Query: 31 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 210 ++ G AAA LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRR+DGI+IIN+GKTW+K Sbjct: 2 AAEGGAAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 61
Query: 211 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 390 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 62 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 121
Query: 391 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFW 570 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG ++ + FW Sbjct: 122 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCL-FW 180
Query: 571 MLARMV 588 +LARMV Sbjct: 181 LLARMV 186
>tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 318 bits (814), Expect = 2e-85 Identities = 156/176 (88%), Positives = 167/176 (94%) Frame = +1
Query: 61 LSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 240 LSQKEADIQMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 241 IENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 420 IENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 421 RTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFWMLARMV 588 RTDHQPI+EAALGNIP IAFCDTDSPM+HVDIGIPANNKG ++ + FWMLARMV Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCL-FWMLARMV 182
>tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 317 bits (813), Expect = 2e-85 Identities = 155/176 (88%), Positives = 167/176 (94%) Frame = +1
Query: 61 LSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVA 240 LSQKEAD+QMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVA Sbjct: 8 LSQKEADVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVA 67
Query: 241 IENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDP 420 IENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDP Sbjct: 68 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDP 127
Query: 421 RTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFWMLARMV 588 RTDHQPI+EAALGNIP IAFCDTDSPM+HVDIGIPANNKG ++ + FWMLARMV Sbjct: 128 RTDHQPIREAALGNIPTIAFCDTDSPMKHVDIGIPANNKGKHSIGCL-FWMLARMV 182
>tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11954 PE=3 SV=1 Length = 310
Score = 317 bits (812), Expect = 3e-85 Identities = 156/186 (83%), Positives = 170/186 (91%) Frame = +1
Query: 31 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 210 ++ G A LSQ+E DIQMMLAADVHLGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+K Sbjct: 4 AAAGGGAPRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEK 63
Query: 211 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 390 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 64 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 123
Query: 391 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFW 570 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG ++ + FW Sbjct: 124 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCL-FW 182
Query: 571 MLARMV 588 +LARMV Sbjct: 183 LLARMV 188
>tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2 SV=1 Length = 308
Score = 315 bits (808), Expect = 9e-85 Identities = 155/186 (83%), Positives = 170/186 (91%) Frame = +1
Query: 31 SSPGQAAAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDK 210 ++ G A LSQKE DIQMMLAADVHLGTKNCDFQ ERYV+KRRSDGI+IIN+GKTWDK Sbjct: 3 AAAGGGAVRALSQKEQDIQMMLAADVHLGTKNCDFQTERYVFKRRSDGIYIINLGKTWDK 62
Query: 211 LELAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFC 390 L+LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F Sbjct: 63 LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 122
Query: 391 EPRLLILTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFW 570 EPRLLILTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG +++ + FW Sbjct: 123 EPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCL-FW 181
Query: 571 MLARMV 588 +L+RMV Sbjct: 182 LLSRMV 187
>tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza sativa GN=OSJNBa0032G08.18 PE=3 SV=1 Length = 305
Score = 315 bits (806), Expect = 2e-84 Identities = 154/180 (85%), Positives = 168/180 (93%) Frame = +1
Query: 49 AAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAAR 228 AA LSQ E D+QMMLAADVHLGTKNCDFQMERYV+KRRSDGI+IIN+GKTW+KL+LAAR Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 229 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 408 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127
Query: 409 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFWMLARMV 588 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG +++ + FW+LARMV Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCL-FWLLARMV 186
>tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os03g08440 PE=2 SV=1 Length = 305
Score = 315 bits (806), Expect = 2e-84 Identities = 154/180 (85%), Positives = 168/180 (93%) Frame = +1
Query: 49 AAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAAR 228 AA LSQ E D+QMMLAADVHLGTKNCDFQMERYV+KRRSDGI+IIN+GKTW+KL+LAAR Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 229 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 408 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127
Query: 409 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFWMLARMV 588 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG +++ + FW+LARMV Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCL-FWLLARMV 186
>tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g08440 PE=3 SV=1 Length = 269
Score = 315 bits (806), Expect = 2e-84 Identities = 154/180 (85%), Positives = 168/180 (93%) Frame = +1
Query: 49 AAMVLSQKEADIQMMLAADVHLGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAAR 228 AA LSQ E D+QMMLAADVHLGTKNCDFQMERYV+KRRSDGI+IIN+GKTW+KL+LAAR Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 229 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLI 408 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLI Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLI 127
Query: 409 LTDPRTDHQPIKEAALGNIPIIAFCDTDSPMRHVDIGIPANNKGGSTVSVVFFWMLARMV 588 LTDPRTDHQPIKE+ALGNIP IAFCDTDSPMR+VDIGIPANNKG +++ + FW+LARMV Sbjct: 128 LTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCL-FWLLARMV 186
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