DK951829 [AcEST]

DK951829
Clone id	TST38A01NGRL0012_H02
Library	TST38
Length	621
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_H02. 5' end sequence.
Accession	DK951829
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL34Contig1
Sequence	GCCATTTGTCAGCACGCTGCTTTGTCTTCGCGCAGCCACAGCTGCCGCTTCTGGCTCGTC GTTGCCGGCTGCATCACCTCGCATCCGTCTGTAGCGTGGACTCGCGTGGTGGCGCACACG CAGCGGCAGCTCCTCCACTGCAGCTCTCGACAGCGAGAAGGCTCAATCAGCGCGTGAATC AGCACGGTGGGCTATTCGACTCGATCACCCAACCATCGCACGTGCAGAGGCTAGGGCCTC TTCTTCCTCCTCCTCCCTCTGCGGCTTCTCACCTCCGAAGCCACATTTTGGCAATGGCAG CTCGAAGTGCTTGCCAGAGCTCTTCCCTCTTGAATTCCCTCACCCAGCTACCTTGCGTTC CTTTCCCTACATCCTCCACCAACGTGAGCTTTGGTAGTTCCTGCCGTGCAAACCACCTCC CGCTTCATGTCACTGCATCAGCATCGGATAGCCGCAAGGCAATGAAAGTTGATGGAACGG TCTTTACGGACAGAACAGTGCTTAACATTAATCCCGTGGCCAAGCACGGGGCTCCATCAA GCGTACCTGCTGCTGCTCCCATTTCTGTGGTGGCCACGGAAGTGGAGACTTTACCCTTGG ATAGGTTGAAGACTGGCTATC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951829\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_H02, 5' (621 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q4PCH1
Definition	tr\|Q4PCH1\|Q4PCH1_USTMA Predicted protein OS=Ustilago maydis
Align length	41
Score (bit)	35.0
E-value	3.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK951829\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_H02, 5' (621 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q4PCH1\|Q4PCH1_USTMA Predicted protein OS=Ustilago maydis GN=U... 35 3.6 tr\|A8L4Z4\|A8L4Z4_FRASN Restriction endonuclease OS=Frankia sp. (... 34 7.9 >tr\|Q4PCH1\|Q4PCH1_USTMA Predicted protein OS=Ustilago maydis GN=UM02192.1 PE=4 SV=1 Length = 210 Score = 35.0 bits (79), Expect = 3.6 Identities = 10/41 (24%), Positives = 24/41 (58%) Frame = +2 Query: 95 RGLAWWRTRSGSSSTAALDSEKAQSARESARWAIRLDHPTI 217 + + WW+ G++ + + + R++A WA+R+D P++ Sbjct: 155 KAMRWWKDVDGAARDRGITKPEIEEIRDTADWAVRMDEPSM 195 >tr\|A8L4Z4\|A8L4Z4_FRASN Restriction endonuclease OS=Frankia sp. (strain EAN1pec) GN=Franean1_7063 PE=4 SV=1 Length = 664 Score = 33.9 bits (76), Expect = 7.9 Identities = 19/37 (51%), Positives = 22/37 (59%) Frame = +2 Query: 95 RGLAWWRTRSGSSSTAALDSEKAQSARESARWAIRLD 205 R LA RTR G AALD A +AR +A+WA LD Sbjct: 157 RQLAAARTRHGQQVAAALDRAAAHNARIAAQWAACLD 193