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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951832
Clone id TST38A01NGRL0012_H05
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_H05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
TCTGCCGTGAAAGGGAGGTCGCCATGGCCGTCGTGGCATCGAAAGCTCTGTTGTCGTCCT
CTCTCTCAACAACTACCGCTCCAGCGACTACCTCGCCCGACTGTTCCCGCCAGCAATTCT
TGGGCGGGAGGGCTCTCCGAGCAGCGGGCCCCTCTTCTTCCTCCAAGCGCGCGTCCTCCT
TCACCGTTCGCGCAACCGCCGATAAGCCCGTGAAGGTTGACAGGCAGTTATGGTTTGCCT
CCAAGCAAAGTCTAAGCTATCTAGATGGCAGCCTTCCTGGTGACTTTGGGTTTGATCCCT
TGGGTTTGATGGACCCAGAGGGGCCTGGAGGCTTCATTGAACCTGATTGGTTGAGGTATG
GAGAAATCATCAATGGAAGATATGCAATGTTGGGTGCCGTTGGAGCTATTGCGCCAGAGA
TCCTTGGCAAGGCTGGTCTCATCCCTCAAGAAACCGCTGTCGTATGGTTTAGGACTGGAG
TGATCCCACCTCTAGGAACCTACAACTACTGGGCAGATCCCTACACGCTATTCGTCCTTG
AGATGGCCCTCATGGGCTTTGCTGAGCACCGAAGAGCACAGGATTATTATAAGCCTGGAT
CGATGGGAAAGCAGTATTTCTTAGGTTTCGAGAAGGGTCTTGGAGGCTCT
■■Homology search results ■■ -
sp_hit_id P27522
Definition sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum
Align length 159
Score (bit) 276.0
E-value 5.0e-74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951832|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_H05, 5'
         (650 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   276   5e-74
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   273   6e-73
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   107   7e-23
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   104   5e-22
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    89   3e-17
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    87   8e-17
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    81   5e-15
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    70   1e-11
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    68   5e-11
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    65   2e-10
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    65   4e-10
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    64   5e-10
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    64   7e-10
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    62   2e-09
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...    62   2e-09
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    62   3e-09
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    62   3e-09
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    61   4e-09
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    61   6e-09
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...    61   6e-09
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    60   8e-09
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...    60   8e-09
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    60   1e-08
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    60   1e-08
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    60   1e-08
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    59   2e-08
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...    59   2e-08
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    59   2e-08
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    59   2e-08

>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  276 bits (707), Expect = 5e-74
 Identities = 133/159 (83%), Positives = 140/159 (88%), Gaps = 2/159 (1%)
 Frame = +3

Query: 180 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 353
           F VRA +  PVK   +RQLWFASKQSLSYLDG LPGDFGFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 354 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 533
            YGE+INGR+AMLGA GAIAPEILGKAGLIPQETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 97  AYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLF 156

Query: 534 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
           VLEMALMGFAEHRR QD+ KPGSMGKQYFLG EKGLGGS
Sbjct: 157 VLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGS 195


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  273 bits (698), Expect = 6e-73
 Identities = 132/158 (83%), Positives = 138/158 (87%), Gaps = 3/158 (1%)
 Frame = +3

Query: 186 VRATADKPVK---VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 356
           VRA A  PVK   VDR LWFASKQSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL 
Sbjct: 40  VRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLA 99

Query: 357 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 536
           YGE+INGR+AMLGAVGAIAPE LGK GLIPQETA+ WF+TGVIPP GTYNYWAD YTLFV
Sbjct: 100 YGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFV 159

Query: 537 LEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
           LEMALMGFAEHRR QD+ KPGSMGKQYFLG EKG GGS
Sbjct: 160 LEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGS 197


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  107 bits (266), Expect = 7e-23
 Identities = 67/166 (40%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = +3

Query: 105 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 284
           ++  FLGGR LR +            TV   AD     DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGRRLRVSKYSTTPTARSATTVCVAADP----DRPLWFPGSTPPPWLDGSLPGD 85

Query: 285 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 461
           FGFDPLGL  DPE         W +  E+++ R+AMLGA G   PE+L K G++   +  
Sbjct: 86  FGFDPLGLASDPE------SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPS-- 137

Query: 462 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 599
            W+        G   Y+ D  TLF++E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.76
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +3

Query: 252 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 407
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  104 bits (259), Expect = 5e-22
 Identities = 67/166 (40%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +3

Query: 105 SRQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGD 284
           ++  FLGG+ LR +             V A A  P   DR LWF       +LDGSLPGD
Sbjct: 30  TKASFLGGKRLRVS-KFIAPVGSRSVAVSAVAADP---DRPLWFPGSTPPEWLDGSLPGD 85

Query: 285 FGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 461
           FGFDPLGL  DPE         W    E+++ R+AMLGA G   PE L K G++   +  
Sbjct: 86  FGFDPLGLGSDPE------SLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPS-- 137

Query: 462 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPG 599
            W+        G   Y+ D  TLFV+E+ L+G+AE RR  D  KPG
Sbjct: 138 -WYTA------GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPG 176



 Score = 33.9 bits (76), Expect = 0.76
 Identities = 23/52 (44%), Positives = 26/52 (50%)
 Frame = +3

Query: 252 LSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 407
           L+  D   PG   FDPLG     G G   +   LR  EI NGR AML  +GA
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAMLAVMGA 236


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 88.6 bits (218), Expect = 3e-17
 Identities = 63/178 (35%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
 Frame = +3

Query: 108 RQQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDF 287
           + +FLGG    ++G               +A   V+  +  W     S  YL GSLPGD 
Sbjct: 19  KSRFLGG----SSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDN 74

Query: 288 GFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 464
           GFDPLGL  DPE    F++       E++NGR+AMLG  G + PE+    G+I       
Sbjct: 75  GFDPLGLAEDPENLRWFVQ------AELVNGRWAMLGVAGMLLPEVFTSIGII---NVPK 125

Query: 465 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMG-----KQYFL 623
           W+        G   Y+A   TLFV+E  L  + E RR QD   PGS+      KQY L
Sbjct: 126 WYAA------GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSL 177


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 87.0 bits (214), Expect = 8e-17
 Identities = 58/149 (38%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
 Frame = +3

Query: 195 TADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEII 371
           T+   V+  +  W     S  YL GSL GD GFDPLGL  DPE    F++       E++
Sbjct: 45  TSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQ------AELV 98

Query: 372 NGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMAL 551
           NGR+AMLG  G + PE+  K G+I       W+        G   Y+A   TLFV+E  L
Sbjct: 99  NGRWAMLGVAGMLLPEVFTKIGII---NVPEWY------DAGKEQYFASSSTLFVIEFIL 149

Query: 552 MGFAEHRRAQDYYKPGSMG-----KQYFL 623
             + E RR QD   PGS+      KQY L
Sbjct: 150 FHYVEIRRWQDIKNPGSVNQDPIFKQYSL 178


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
 Frame = +3

Query: 231 WFASKQSLSYLDGSLPGDFGFDPLGLM-DPEGPGGFIEPDWLRYGEIINGRYAMLGAVGA 407
           W    QS +YLDGSL GD GFDPL L  DPE    F++ D      ++NGR+AMLG  G 
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQAD------VVNGRWAMLGVAGM 89

Query: 408 IAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDY 587
           + PE+L KAGL+    A  W R   +P  G   Y+A   T   + M+   + E RR QD 
Sbjct: 90  LIPEVLTKAGLM---NAPEWLR---LP--GKETYFASSSTALRVHMS-STYVEIRRWQDI 140

Query: 588 YKPGSMGK 611
             PGS+ +
Sbjct: 141 KNPGSVNQ 148


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = +3

Query: 258 YLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKA 434
           +LDGSLPGDFGFDPLGL  DP     F++  W R  E+I+GR+AML  +G      +G+A
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFLK--WYREAELIHGRWAMLAVLGI----FVGQA 124

Query: 435 GLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGK 611
                 T + WF  G  P  +  +++     TL   ++ LMG+ E +R  D++ P S   
Sbjct: 125 W-----TGIPWFEAGADPGAVAPFSFG----TLLGTQLLLMGWVESKRWVDFFDPDSQSV 175

Query: 612 QY 617
           ++
Sbjct: 176 EW 177


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 67.8 bits (164), Expect = 5e-11
 Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
 Frame = +3

Query: 180 FTVRATADKPVKVDRQLWFASKQSLSYLDGSLPGDFGFDPLGL-MDPEGPGGFIEPDWLR 356
           FTV A A K   +       +     +LDGSLPGD+GFDPLGL  DP     F++  W R
Sbjct: 44  FTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP----AFLK--WYR 97

Query: 357 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIP-PLGTYNYWADPYTLF 533
             E+I+GR+AM   +G      +G+A      + + WF  G  P  +  +++     TL 
Sbjct: 98  EAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----TLL 144

Query: 534 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEK 635
             ++ LMG+ E +R  D++ P S   ++   + K
Sbjct: 145 GTQLILMGWVESKRWVDFFDPDSQSVEWATPWSK 178


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score = 65.5 bits (158), Expect = 2e-10
 Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
 Frame = +3

Query: 231 WFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLRY--GEIINGRYAMLGAVG 404
           W   +   SYLDGS PGDFGFD LGL       G +  +  RY   E+I+ R+AML   G
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGL-------GEVPANLERYKESELIHCRWAMLAVPG 101

Query: 405 AIAPEILGKAGLI-PQETAVVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQ 581
            I PE LG    +  QE A +    G    LG    W    T+  +E   + F EH+R+ 
Sbjct: 102 IIVPEALGLGNWVKAQEWAAI--PGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSM 159

Query: 582 D 584
           +
Sbjct: 160 E 160
tr_hit_id Q02071
Definition tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein OS=Pinus sylvestris
Align length 184
Score (bit) 284.0
E-value 3.0e-75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951832|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_H05, 5'
         (650 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein...   284   3e-75
tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea...   280   4e-74
tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Popul...   279   9e-74
tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Popul...   279   1e-73
tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein ...   276   6e-73
tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein ...   276   1e-72
tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome...   270   4e-71
tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding prot...   267   4e-70
tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding prot...   267   4e-70
tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea ...   266   6e-70
tr|Q43381|Q43381_ARATH PSI type III chlorophyll a/b-binding prot...   264   3e-69
tr|Q8LCR7|Q8LCR7_ARATH PSI type III chlorophyll a/b-binding prot...   260   6e-68
tr|Q6H748|Q6H748_ORYSJ Os02g0197600 protein OS=Oryza sativa subs...   259   8e-68
tr|A2X218|A2X218_ORYSI Putative uncharacterized protein OS=Oryza...   259   8e-68
tr|A9U226|A9U226_PHYPA Predicted protein (Fragment) OS=Physcomit...   259   1e-67
tr|A9TEM8|A9TEM8_PHYPA Predicted protein OS=Physcomitrella paten...   259   1e-67
tr|A9TEM7|A9TEM7_PHYPA Predicted protein (Fragment) OS=Physcomit...   259   1e-67
tr|A9TB65|A9TB65_PHYPA Predicted protein (Fragment) OS=Physcomit...   258   2e-67
tr|Q2V2R9|Q2V2R9_ARATH Uncharacterized protein At1g61520.2 OS=Ar...   231   3e-59
tr|Q9M538|Q9M538_ALOME Chlorophyll a/b-binding protein type III ...   231   4e-59
tr|B5KV37|B5KV37_HELAN Chloroplast PSI type III chlorophyll a/b-...   225   2e-57
tr|B5KV22|B5KV22_HELAN Chloroplast PSI type III chlorophyll a/b-...   225   2e-57
tr|A4QPL5|A4QPL5_MESVI Chloroplast light-harvesting complex I pr...   209   2e-52
tr|A2SY14|A2SY14_MESVI Light-harvesting chlorophyll-a/b binding ...   209   2e-52
tr|A4S9V8|A4S9V8_OSTLU Photosystem I light harvesting complex, c...   207   4e-52
tr|Q3B9U5|Q3B9U5_OSTTA Chloroplast light-harvesting complex I pr...   203   6e-51
tr|Q75VY9|Q75VY9_CHLRE Light-harvesting chlorophyll-a/b protein ...   200   5e-50
tr|A8JF10|A8JF10_CHLRE Light-harvesting chlorophyll-a/b protein ...   200   5e-50
tr|A4QPN5|A4QPN5_9CHLO Chloroplast light-harvesting complex I pr...   200   5e-50
tr|A2SY38|A2SY38_CHLIN Light-harvesting chlorophyll-a/b binding ...   197   5e-49

>tr|Q02071|Q02071_PINSY Type III chlorophyll a /b-binding protein
           OS=Pinus sylvestris GN=lhaC1 PE=2 SV=1
          Length = 286

 Score =  284 bits (727), Expect = 3e-75
 Identities = 143/184 (77%), Positives = 153/184 (83%), Gaps = 3/184 (1%)
 Frame = +3

Query: 108 RQQFLGGRALRAAGPXXXXXXXXXFTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLP 278
           +Q  LGG+AL              FTVR  A+++KPVK  DRQLWFAS QSLSYLDGSLP
Sbjct: 25  QQLLLGGKALVLPPYFSQSSRRTSFTVRSQASSNKPVKQGDRQLWFASDQSLSYLDGSLP 84

Query: 279 GDFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETA 458
           GD+GFDPLGLMDPEGPGGF+EP WL YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA
Sbjct: 85  GDYGFDPLGLMDPEGPGGFMEPGWLVYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETA 144

Query: 459 VVWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKG 638
           + WF+TGVIPP GTYNYWADP+TLFVLEMALMGFAEHRR QDY  PGSMGKQYFLG EK 
Sbjct: 145 LPWFQTGVIPPAGTYNYWADPFTLFVLEMALMGFAEHRRLQDYRNPGSMGKQYFLGLEKF 204

Query: 639 LGGS 650
           LGGS
Sbjct: 205 LGGS 208


>tr|A9NZR0|A9NZR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 289

 Score =  280 bits (717), Expect = 4e-74
 Identities = 138/160 (86%), Positives = 144/160 (90%), Gaps = 3/160 (1%)
 Frame = +3

Query: 180 FTVR--ATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDW 350
           F VR  A++ KPVK  DRQLWFASKQSLSYLDGSLPGD+GFDPLGLMDPEGPGGFIEP W
Sbjct: 51  FAVRSQASSGKPVKQGDRQLWFASKQSLSYLDGSLPGDYGFDPLGLMDPEGPGGFIEPGW 110

Query: 351 LRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTL 530
           L YGEIINGRYAMLGAVGAIAPEILGK GLIPQETA+ WFRTGVIPP GTY+YWADP+TL
Sbjct: 111 LAYGEIINGRYAMLGAVGAIAPEILGKLGLIPQETALPWFRTGVIPPAGTYDYWADPFTL 170

Query: 531 FVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
           FVLEMALMGFAEHRR QDY  PGSM KQYFLGFEK LGGS
Sbjct: 171 FVLEMALMGFAEHRRLQDYRYPGSMSKQYFLGFEKYLGGS 210


>tr|A9PE75|A9PE75_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 274

 Score =  279 bits (714), Expect = 9e-74
 Identities = 136/158 (86%), Positives = 141/158 (89%), Gaps = 1/158 (0%)
 Frame = +3

Query: 180 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 356
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 357 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 536
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 537 LEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
            EMALMGFAEHRR QD+ KPGSMGKQYFLGFEK LGGS
Sbjct: 159 FEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYLGGS 196


>tr|A9PK62|A9PK62_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 274

 Score =  279 bits (713), Expect = 1e-73
 Identities = 136/158 (86%), Positives = 141/158 (89%), Gaps = 1/158 (0%)
 Frame = +3

Query: 180 FTVRATADKPVKV-DRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWLR 356
           F VRA +  PVK  +RQLWFASKQSLSYLDGSLPGDFGFDPLGL DPEG GGFIEP WL 
Sbjct: 39  FVVRAASTPPVKQGNRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLA 98

Query: 357 YGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLFV 536
           YGEIINGRYAMLGAVGAIAPEILGKAGLIP ETA+ WFRTGVIPP GTY+YWADPYTLFV
Sbjct: 99  YGEIINGRYAMLGAVGAIAPEILGKAGLIPPETALPWFRTGVIPPAGTYSYWADPYTLFV 158

Query: 537 LEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
            EMALMGFAEHRR QD+ KPGSMGKQYFLGFEK LGGS
Sbjct: 159 FEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGS 196


>tr|A0FHB5|A0FHB5_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  276 bits (707), Expect = 6e-73
 Identities = 138/183 (75%), Positives = 147/183 (80%), Gaps = 3/183 (1%)
 Frame = +3

Query: 111 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 281
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 282 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 461
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 462 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 641
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLGFEK L
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 642 GGS 650
           GGS
Sbjct: 195 GGS 197


>tr|A0FHB6|A0FHB6_LYCAU Type III chlorophyll a/b-binding protein
           OS=Lycoris aurea PE=2 SV=1
          Length = 275

 Score =  276 bits (705), Expect = 1e-72
 Identities = 138/183 (75%), Positives = 147/183 (80%), Gaps = 3/183 (1%)
 Frame = +3

Query: 111 QQFLGGRALR-AAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPG 281
           +Q LGGR ++              F V+A +  PVK   DRQLWFASKQSLSYLDGSLPG
Sbjct: 15  RQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGSLPG 74

Query: 282 DFGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAV 461
           DFGFDPLGL DPEG GGFIEP WL YGEIINGRYAMLG  GAIAPEILGK GLIP ETA+
Sbjct: 75  DFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPETAL 134

Query: 462 VWFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGL 641
            WF+TGVIPP GTY+YWADPYTLFVLEMALMGFAEHRR QD+ KPGSMGKQYFLGFEK L
Sbjct: 135 PWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKFL 194

Query: 642 GGS 650
           GGS
Sbjct: 195 GGS 197


>tr|A7PSQ5|A7PSQ5_VITVI Chromosome chr6 scaffold_28, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023035001
           PE=4 SV=1
          Length = 274

 Score =  270 bits (691), Expect = 4e-71
 Identities = 134/182 (73%), Positives = 144/182 (79%), Gaps = 2/182 (1%)
 Frame = +3

Query: 111 QQFLGGRALRAAGPXXXXXXXXXFTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGD 284
           +Q LG R L++            F VRA +  PVK   DR LWFASKQSL+YLDGSLPGD
Sbjct: 19  RQILGSRPLQSPS-----RKSSSFVVRAASTPPVKQGADRPLWFASKQSLTYLDGSLPGD 73

Query: 285 FGFDPLGLMDPEGPGGFIEPDWLRYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVV 464
           +GFDPLGL DPEG GGFIEP WL YGE+INGRYAMLGAVGAIAPEILGK GLIP ETA+ 
Sbjct: 74  YGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRYAMLGAVGAIAPEILGKLGLIPPETALP 133

Query: 465 WFRTGVIPPLGTYNYWADPYTLFVLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLG 644
           WF+TGV PP GTYNYWADPYTLFV EMALMGFAEHRR QD+  PGSMGKQYFLG EK LG
Sbjct: 134 WFKTGVFPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKYLG 193

Query: 645 GS 650
           GS
Sbjct: 194 GS 195


>tr|Q9SY97|Q9SY97_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1
          Length = 273

 Score =  267 bits (683), Expect = 4e-70
 Identities = 129/159 (81%), Positives = 136/159 (85%), Gaps = 2/159 (1%)
 Frame = +3

Query: 180 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 353
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 354 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 533
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 534 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
           VLEMALMGFAEHRR QD+Y PGSMGKQYFLG EKGL GS
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGS 195


>tr|Q0WR83|Q0WR83_ARATH PSI type III chlorophyll a/b-binding protein
           OS=Arabidopsis thaliana GN=At1g61520 PE=2 SV=1
          Length = 273

 Score =  267 bits (683), Expect = 4e-70
 Identities = 129/159 (81%), Positives = 136/159 (85%), Gaps = 2/159 (1%)
 Frame = +3

Query: 180 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 353
           F V+A A  PVK   +R LWFAS QSLSYLDGSLPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 37  FVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWL 96

Query: 354 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 533
            YGEIINGR+AMLGA GAIAPEILGKAGLIP ETA+ WF+TGVIPP GTY YWAD YTLF
Sbjct: 97  AYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLF 156

Query: 534 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
           VLEMALMGFAEHRR QD+Y PGSMGKQYFLG EKGL GS
Sbjct: 157 VLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGS 195


>tr|B6SUC4|B6SUC4_MAIZE Chlorophyll a-b binding protein 8 OS=Zea
           mays PE=2 SV=1
          Length = 267

 Score =  266 bits (681), Expect = 6e-70
 Identities = 126/159 (79%), Positives = 135/159 (84%), Gaps = 2/159 (1%)
 Frame = +3

Query: 180 FTVRATADKPVK--VDRQLWFASKQSLSYLDGSLPGDFGFDPLGLMDPEGPGGFIEPDWL 353
           F VRA++  P K   DRQLWFASKQSLSYLDG+LPGD+GFDPLGL DPEG GGFIEP WL
Sbjct: 31  FVVRASSSPPAKQGADRQLWFASKQSLSYLDGTLPGDYGFDPLGLSDPEGTGGFIEPKWL 90

Query: 354 RYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETAVVWFRTGVIPPLGTYNYWADPYTLF 533
            YGE+INGRYAMLGAVGAIAPEI GK G+IP ETA+ WF+TGVIPP GTYNYWAD YTLF
Sbjct: 91  AYGEVINGRYAMLGAVGAIAPEIFGKMGIIPPETALPWFKTGVIPPAGTYNYWADSYTLF 150

Query: 534 VLEMALMGFAEHRRAQDYYKPGSMGKQYFLGFEKGLGGS 650
           V  MALMGFAEHRR QD+Y PGSMGKQYFLG EK L GS
Sbjct: 151 VFNMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKFLAGS 189