DK951850 |
Clone id |
TST38A01NGRL0012_H23 |
Library |
TST38 |
Length |
550 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_H23. 5' end sequence. |
Accession |
DK951850 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL21Contig1 |
Sequence |
CTTGTTCACAAGCACCGTCATACACACACATACAGGCCTCTAACACCCGCAGTGCAGGCC AGAGCTCCTCTGTCTTCTCCATCTCTCCTTTTTGAATCGTGCAGGAATGGCTAGCAATGG AGTTGTGACTGTCTATGGCAATGGTGCCATCTCTGATCCCAAGAAGTCATCTTATGCAGT CAAGGTGGGTCTTGCTCAGATGCTCCGAGGAGGTGTTATTATGGATGTTGTGAATGCAGA GCAGGCTCGAATTGCGGAAGAGGCAGGCGCTACTGCCGTAATGGCCCTCGAACGTGTGCC TGCGGACATCAGGGCTGAGGGTGGTGTGGCTCGCATGAGTGATCCTGGTTTGATCAAGGA GATCAAGAATGCTGTCACTATTCCTGTGATGGCCAAAGCCAGAATTGGGCATTTTGTGGA AGCGCAGGTACTTGAGGCCATTGGTGTGGATTACATTGATGAGAGTGAGGTCCTTACCCC AGCGGATGATGTGAACCACATCAACAAGCACAACTTTCGTATTCCTTTTGTTTGTGGCTG CCGCAACCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
148 |
Score (bit) |
272.0 |
E-value |
9.0e-73 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q45FF0 |
Definition |
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max |
Align length |
147 |
Score (bit) |
253.0 |
E-value |
5.0e-66 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951850|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_H23, 5' (550 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 253 5e-66 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 252 8e-66 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 251 2e-65 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 248 2e-64 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 245 1e-63 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 245 1e-63 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 242 1e-62 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 239 5e-62 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 239 5e-62 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 239 7e-62 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 238 1e-61 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 237 3e-61 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 236 8e-61 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 236 8e-61 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 234 3e-60 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 227 3e-58 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 224 2e-57 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 224 2e-57 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 224 2e-57 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 224 2e-57 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 223 7e-57 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 222 9e-57 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 222 9e-57 tr|A6R037|A6R037_AJECN Pyridoxal biosynthesis lyase pdxS OS=Ajel... 221 2e-56 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 221 3e-56 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 220 4e-56 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 220 4e-56 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 220 4e-56 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 219 1e-55 tr|A8NFX3|A8NFX3_COPC7 Putative uncharacterized protein OS=Copri... 219 1e-55
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 253 bits (646), Expect = 5e-66 Identities = 126/147 (85%), Positives = 138/147 (93%) Frame = +2
Query: 110 ASNGVVTVYGNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMAL 289 + +GVVTVYGNGAI++ KKS ++VKVGLAQMLRGGVIMDVV+AEQARIAEEAGA AVMAL Sbjct: 4 SGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMAL 63
Query: 290 ERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESE 469 ERVPADIRA+GGVARMSDP LI +IK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESE Sbjct: 64 ERVPADIRAQGGVARMSDPQLINDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 123
Query: 470 VLTPADDVNHINKHNFRIPFVCGCRNL 550 VLT ADD NHINKHNFRIPFVCGCRNL Sbjct: 124 VLTLADDANHINKHNFRIPFVCGCRNL 150
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 252 bits (644), Expect = 8e-66 Identities = 128/149 (85%), Positives = 140/149 (93%), Gaps = 1/149 (0%) Frame = +2
Query: 107 MASNGVVTVYGNGAISDP-KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 283 MA +GVVT+YGNGA+++ K+S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA AVM Sbjct: 1 MAGSGVVTLYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60
Query: 284 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 463 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
Query: 464 SEVLTPADDVNHINKHNFRIPFVCGCRNL 550 SEVLT ADD NHINKHNFRIPFVCGCRNL Sbjct: 121 SEVLTLADDENHINKHNFRIPFVCGCRNL 149
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 251 bits (641), Expect = 2e-65 Identities = 129/149 (86%), Positives = 139/149 (93%), Gaps = 1/149 (0%) Frame = +2
Query: 107 MASNGVVTVYGNGA-ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 283 M +GVVTVYGNGA I++ KKS ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVM Sbjct: 1 MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
Query: 284 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 463 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120
Query: 464 SEVLTPADDVNHINKHNFRIPFVCGCRNL 550 SEVLT AD+ NHINKHNFRIPFVCGCRNL Sbjct: 121 SEVLTLADEDNHINKHNFRIPFVCGCRNL 149
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 248 bits (633), Expect = 2e-64 Identities = 131/154 (85%), Positives = 139/154 (90%), Gaps = 6/154 (3%) Frame = +2
Query: 107 MASNGVVTVY---GNGAI--SDPKKS-SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAG 268 M NGVV +Y GNG + ++ KKS SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAG Sbjct: 1 MEGNGVVAIYRNNGNGLLENNNSKKSVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAG 60
Query: 269 ATAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGV 448 A AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGV Sbjct: 61 AVAVMALERVPADIRAEGGVARMSDPAMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGV 120
Query: 449 DYIDESEVLTPADDVNHINKHNFRIPFVCGCRNL 550 DYIDESEVLTPADDVNHINKHN+RIPFVCGCRNL Sbjct: 121 DYIDESEVLTPADDVNHINKHNYRIPFVCGCRNL 154
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 245 bits (626), Expect = 1e-63 Identities = 128/153 (83%), Positives = 133/153 (86%), Gaps = 5/153 (3%) Frame = +2
Query: 107 MASNGVVTVYGNGAIS-----DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 271 M NGVV VY N + K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGNGVVAVYHNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDAAQARIAEEAGA 60
Query: 272 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 451 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVD Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVD 120
Query: 452 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNL 550 YIDESEVLTPADDVNHINKHN+RIPFVCGCRNL Sbjct: 121 YIDESEVLTPADDVNHINKHNYRIPFVCGCRNL 153
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 245 bits (625), Expect = 1e-63 Identities = 125/153 (81%), Positives = 138/153 (90%), Gaps = 5/153 (3%) Frame = +2
Query: 107 MASNGVVTVYGNGAISDP-----KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 271 M +GVVTVYGNGA+++ K S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA Sbjct: 1 MEGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 60
Query: 272 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 451 AVMALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LE++G+D Sbjct: 61 CAVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGID 120
Query: 452 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNL 550 Y+DESEVLT AD+ NHINKHNFRIPFVCGCRNL Sbjct: 121 YVDESEVLTLADEDNHINKHNFRIPFVCGCRNL 153
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 242 bits (617), Expect = 1e-62 Identities = 120/151 (79%), Positives = 135/151 (89%), Gaps = 6/151 (3%) Frame = +2
Query: 116 NGVVTVYGNGAIS------DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYGN + PK S+++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGNNGAALLEPPKQPKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 278 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGCRNL 550 DESEVLTPADD +HINKHNFR+PFVCGCR+L Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDL 156
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 239 bits (611), Expect = 5e-62 Identities = 121/151 (80%), Positives = 136/151 (90%), Gaps = 6/151 (3%) Frame = +2
Query: 116 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 278 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGCRNL 550 DESEVLTPADD +HINKHNFR+PFVCGCR+L Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDL 156
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 239 bits (611), Expect = 5e-62 Identities = 121/151 (80%), Positives = 136/151 (90%), Gaps = 6/151 (3%) Frame = +2
Query: 116 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 69 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 128
Query: 278 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 129 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 188
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGCRNL 550 DESEVLTPADD +HINKHNFR+PFVCGCR+L Sbjct: 189 DESEVLTPADDAHHINKHNFRVPFVCGCRDL 219
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 239 bits (610), Expect = 7e-62 Identities = 125/152 (82%), Positives = 132/152 (86%), Gaps = 4/152 (2%) Frame = +2
Query: 107 MASNGVVTVYGNGA----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAT 274 M N VV V NG+ + K SYAVKVGLAQMLRGGVIMDVV+ QARIAEEAGA Sbjct: 1 MEENRVVAVLNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDVAQARIAEEAGAV 60
Query: 275 AVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDY 454 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY Sbjct: 61 AVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVDY 120
Query: 455 IDESEVLTPADDVNHINKHNFRIPFVCGCRNL 550 IDESEVLTPADDV+HINKHN+RIPFVCGCRNL Sbjct: 121 IDESEVLTPADDVHHINKHNYRIPFVCGCRNL 152
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