DK951862 |
Clone id |
TST38A01NGRL0012_I12 |
Library |
TST38 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_I12. 5' end sequence. |
Accession |
DK951862 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL21Contig1 |
Sequence |
GGTAAATTTTGCAGCCGGTGGTGTTGCAACTCCTGCTGACGCAGCTATGATGATGCAGCT TGGGTGTGACGGTGTGTTTGTTGGGTCTGGTATCTTCAAAAGTGGCAACCCCTCTCAGCG TGCTCGAGCCATAGTTTCTGCTGTGACTCACTTCAATGACCCTAGCATTATAGCAGATGT CAGCTGCGGTTTGGGTGAAGCTATGGTGGGTATCAATCTTAATGACAAGAAAGTTGAGCG CTTTGCTGCAAGGTCTGATTAATGTGGAGAATGGATTCGTACAAATGCTGTATGTGTTGT GTGTCACTACGGGTGAGGCATCCGAGGCTTGTGTTCAAGCCCTTGTTGTTCAGCAAGTTG TTATGGTAGATAGTACTTTAGTTCACTTAGAACTCTTTGTCTGATTGCCTTTGGTTATTG GCAGTGCTGGTAGACCATTTAACGGAACCATTCATTCTCACTCCAGCAGAACCTGAGCAA CCTGGGAACATGGAAACTGGAATTGTAATGCTTACAACAGAAAAATATAAATAAGCTTTT TGATAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39963 |
Definition |
sp|Q39963|PDX1_HEVBR Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis |
Align length |
71 |
Score (bit) |
124.0 |
E-value |
3.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FRZ2 |
Definition |
tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
71 |
Score (bit) |
122.0 |
E-value |
9.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951862|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_I12, 5' (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 122 9e-27 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 122 9e-27 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 121 2e-26 tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome ... 121 2e-26 tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 120 4e-26 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 120 6e-26 tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza... 120 6e-26 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 119 8e-26 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 118 2e-25 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 118 2e-25 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 117 3e-25 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 117 4e-25 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 116 7e-25 tr|B2BGT9|B2BGT9_OLEEU Putative SNZ1 protein (Fragment) OS=Olea ... 116 9e-25 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 115 2e-24 tr|A3C1S6|A3C1S6_ORYSJ Putative uncharacterized protein OS=Oryza... 115 2e-24 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 114 4e-24 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 113 6e-24 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 103 8e-21 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 101 2e-20 tr|Q01DD0|Q01DD0_OSTTA Sor-like protein (ISS) OS=Ostreococcus ta... 100 4e-20 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 99 2e-19 tr|B6QFZ9|B6QFZ9_PENMA Pyridoxine biosynthesis protein OS=Penici... 97 6e-19 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 97 7e-19 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 97 7e-19 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 96 9e-19 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 96 9e-19 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 96 9e-19 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 96 9e-19 tr|A8KZF1|A8KZF1_FRASN Pyridoxine biosynthesis protein OS=Franki... 96 1e-18
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 122 bits (307), Expect = 9e-27 Identities = 58/71 (81%), Positives = 68/71 (95%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND Sbjct: 247 LMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLND 306
Query: 227 KKVERFAARSD 259 KVER+AARS+ Sbjct: 307 PKVERYAARSE 317
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 122 bits (307), Expect = 9e-27 Identities = 58/71 (81%), Positives = 68/71 (95%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ADVS GLGEAMVGINLND Sbjct: 310 LMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILADVSTGLGEAMVGINLND 369
Query: 227 KKVERFAARSD 259 KVER+AARS+ Sbjct: 370 PKVERYAARSE 380
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 121 bits (304), Expect = 2e-26 Identities = 57/71 (80%), Positives = 67/71 (94%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP+I+ DVS GLGEAMVGINLND Sbjct: 247 LMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPTILTDVSAGLGEAMVGINLND 306
Query: 227 KKVERFAARSD 259 KVER+AARS+ Sbjct: 307 PKVERYAARSE 317
>tr|A7NYE9|A7NYE9_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024095001 PE=4 SV=1 Length = 197
Score = 121 bits (304), Expect = 2e-26 Identities = 55/71 (77%), Positives = 67/71 (94%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++A+VSCGLGEAMVGINLND Sbjct: 127 LMMQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLND 186
Query: 227 KKVERFAARSD 259 KVER+A RS+ Sbjct: 187 DKVERYANRSE 197
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 120 bits (302), Expect = 4e-26 Identities = 56/71 (78%), Positives = 66/71 (92%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP I+A+VSCGLGEAMVGINL D Sbjct: 241 LMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGINLTD 300
Query: 227 KKVERFAARSD 259 KVERFA RS+ Sbjct: 301 DKVERFANRSE 311
>tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 318
Score = 120 bits (300), Expect = 6e-26 Identities = 57/71 (80%), Positives = 67/71 (94%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP I+A+VS GLGEAMVGINL+D Sbjct: 248 LMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSD 307
Query: 227 KKVERFAARSD 259 KVERFAARS+ Sbjct: 308 PKVERFAARSE 318
>tr|A3BFP4|A3BFP4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021866 PE=4 SV=1 Length = 298
Score = 120 bits (300), Expect = 6e-26 Identities = 57/71 (80%), Positives = 67/71 (94%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH++DP I+A+VS GLGEAMVGINL+D Sbjct: 228 LMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSD 287
Query: 227 KKVERFAARSD 259 KVERFAARS+ Sbjct: 288 PKVERFAARSE 298
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 119 bits (299), Expect = 8e-26 Identities = 53/71 (74%), Positives = 66/71 (92%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP ++A++SCGLGEAMVG+NLND Sbjct: 240 LMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNLND 299
Query: 227 KKVERFAARSD 259 VERFA RS+ Sbjct: 300 SNVERFANRSE 310
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 118 bits (296), Expect = 2e-25 Identities = 59/86 (68%), Positives = 69/86 (80%) Frame = +2
Query: 2 VNFXXXXXXXXXXXXMMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADV 181 VNF +MMQLGCDGVFVGSGIFKSG+P++RARAIV AVTH+ND ++A+V Sbjct: 228 VNFAAGGVATPADAALMMQLGCDGVFVGSGIFKSGDPAKRARAIVEAVTHYNDARVLAEV 287
Query: 182 SCGLGEAMVGINLNDKKVERFAARSD 259 S LGEAMVGINL+DKKVERFAARS+ Sbjct: 288 SENLGEAMVGINLSDKKVERFAARSE 313
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 118 bits (295), Expect = 2e-25 Identities = 54/71 (76%), Positives = 65/71 (91%) Frame = +2
Query: 47 MMMQLGCDGVFVGSGIFKSGNPSQRARAIVSAVTHFNDPSIIADVSCGLGEAMVGINLND 226 +MMQLGCDGVFVGSG+FKSG+P++RARAIV AVTH++DP I+A+VSCGLGEAMVG+NL D Sbjct: 244 LMMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPEILAEVSCGLGEAMVGLNLTD 303
Query: 227 KKVERFAARSD 259 VERFA RS+ Sbjct: 304 HNVERFANRSE 314
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