DK951877 |
Clone id |
TST38A01NGRL0012_J03 |
Library |
TST38 |
Length |
597 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_J03. 5' end sequence. |
Accession |
DK951877 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL370Contig1 |
Sequence |
GCTGTTTACGCGAATCACACTCACCTGAACAACAAGTGGTTAGTGCTGTGGAGTTCTCCT TCACCGTTTAGCTATGGCGAGTACCATGCAGAAGCTTCCTGCATCCGCCTCCTCTTCTTA CCACCACCGCGATGCCATCCTACCCTCTCGCAGCAGCCCGTCATTGTCTTTGAGGATGCA GTTCGTTAAGGGTGAGGTGTTTGGGTACTCCCTCTCCCTCCCGAAGGCGCTTGTCCCTGT CAGTCCCTTGAAATCTTTGAATGGCCCCATCCCTACCTGCAACGTTGCCACAACAACAGC TCCAGCCAAAGAGGCAGGCAAAGTTAAAGTGAGACCTGATATCAGGAACATTGCTATCAT TGCTCATGTGGACCATGGGAAAACGACTTTGGTGGATGCCATGCTGAAGCAGGCAAAGGT GTTTCGAGAAAATCAGGCCGTACAAGAGAGAGTAATGGATTCAAACGCCTTAGAGAGAGA GCGAGGGATCACAATCTTGAGCAAAAATACTGCTATTCGCTATAAAGGGACAAAGATTAA TATCATAGACACTCCTGGACATTCTGACTTTGGTGGAGAAGTCGAACGCGTCTTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O07631 |
Definition |
sp|O07631|TYPA_BACSU GTP-binding protein typA/bipA homolog OS=Bacillus subtilis |
Align length |
91 |
Score (bit) |
142.0 |
E-value |
2.0e-33 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A8JCK3 |
Definition |
tr|A8JCK3|A8JCK3_CHLRE GTP binding protein TypA OS=Chlamydomonas reinhardtii |
Align length |
110 |
Score (bit) |
172.0 |
E-value |
1.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951877|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_J03, 5' (597 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A8JCK3|A8JCK3_CHLRE GTP binding protein TypA OS=Chlamydomonas... 172 1e-41 tr|Q6SYB1|Q6SYB1_TRIPR GTP-binding protein TypA OS=Trifolium pra... 170 6e-41 tr|A9REI5|A9REI5_PHYPA Predicted protein OS=Physcomitrella paten... 168 2e-40 tr|A9SWN7|A9SWN7_PHYPA Predicted protein OS=Physcomitrella paten... 166 1e-39 tr|A9YT54|A9YT54_SUASA Tyrosine phosphorylated protein A OS=Suae... 165 2e-39 tr|A9PF30|A9PF30_POPTR Putative uncharacterized protein OS=Popul... 164 4e-39 tr|Q6KA61|Q6KA61_ORYSJ Os02g0285800 protein OS=Oryza sativa subs... 160 4e-38 tr|B8AFM9|B8AFM9_ORYSI Putative uncharacterized protein OS=Oryza... 160 4e-38 tr|A3A5M0|A3A5M0_ORYSJ Putative uncharacterized protein OS=Oryza... 160 4e-38 tr|A7PWD3|A7PWD3_VITVI Chromosome chr8 scaffold_34, whole genome... 157 3e-37 tr|A9WGX0|A9WGX0_CHLAA GTP-binding protein TypA OS=Chloroflexus ... 154 5e-36 tr|B7BM25|B7BM25_9CLOT Putative uncharacterized protein OS=Clost... 154 5e-36 tr|B2QT52|B2QT52_9CHLR GTP-binding protein TypA OS=Chloroflexus ... 154 5e-36 tr|Q9FNA8|Q9FNA8_ARATH GTP-binding protein typA (Tyrosine phosph... 154 5e-36 tr|A5ZNA1|A5ZNA1_9FIRM Putative uncharacterized protein OS=Rumin... 153 6e-36 tr|A5KKP3|A5KKP3_9FIRM Putative uncharacterized protein OS=Rumin... 153 6e-36 tr|B7Y0F0|B7Y0F0_RUMHA Putative uncharacterized protein OS=Blaut... 153 8e-36 tr|B7C3F1|B7C3F1_9FIRM Putative uncharacterized protein OS=Roseb... 153 8e-36 tr|B0G385|B0G385_9FIRM Putative uncharacterized protein OS=Dorea... 152 1e-35 tr|A7B7M6|A7B7M6_RUMGN Putative uncharacterized protein OS=Rumin... 152 1e-35 tr|A5N7U1|A5N7U1_CLOK5 GTP-binding protein OS=Clostridium kluyve... 152 2e-35 tr|A5Z9G2|A5Z9G2_9FIRM Putative uncharacterized protein OS=Eubac... 152 2e-35 tr|A0Q144|A0Q144_CLONN GTP-binding protein TypA OS=Clostridium n... 151 2e-35 tr|B1BAZ0|B1BAZ0_CLOBO GTP-binding protein TypA/BipA OS=Clostrid... 151 2e-35 tr|B0NJJ6|B0NJJ6_EUBSP Putative uncharacterized protein OS=Clost... 151 2e-35 tr|A9B0I8|A9B0I8_HERA2 GTP-binding protein TypA OS=Herpetosiphon... 151 3e-35 tr|A3DE60|A3DE60_CLOTH GTP-binding protein TypA OS=Clostridium t... 151 3e-35 tr|B8G578|B8G578_9CHLR GTP-binding protein TypA OS=Chloroflexus ... 151 3e-35 tr|Q896E7|Q896E7_CLOTE GTP-binding protein lepA OS=Clostridium t... 150 4e-35 tr|B4U8A4|B4U8A4_HYDS0 GTP-binding protein TypA OS=Hydrogenobacu... 150 4e-35
>tr|A8JCK3|A8JCK3_CHLRE GTP binding protein TypA OS=Chlamydomonas reinhardtii GN=GBA1 PE=4 SV=1 Length = 683
Score = 172 bits (436), Expect = 1e-41 Identities = 83/110 (75%), Positives = 94/110 (85%) Frame = +2
Query: 266 PIPTCNVATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQ 445 P+ C AT APA + + VR DIRNIAIIAHVDHGKTTLVDAMLKQ+KVFR+NQA Sbjct: 61 PVTVCRTATVDAPASASSEGSVREDIRNIAIIAHVDHGKTTLVDAMLKQSKVFRDNQATA 120
Query: 446 ERVMDSNALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 ER+MDSN LERERGITIL+KNTAIRY+G K+NIIDTPGH+DFGGEVERV+ Sbjct: 121 ERIMDSNDLERERGITILAKNTAIRYRGIKVNIIDTPGHADFGGEVERVI 170
>tr|Q6SYB1|Q6SYB1_TRIPR GTP-binding protein TypA OS=Trifolium pratense PE=2 SV=1 Length = 676
Score = 170 bits (430), Expect = 6e-41 Identities = 89/137 (64%), Positives = 106/137 (77%), Gaps = 1/137 (0%) Frame = +2
Query: 188 KGEVFGYSLSLPKALVPVSPLKSLNGPIPTCNVATTTAP-AKEAGKVKVRPDIRNIAIIA 364 + ++FG SLS K + ++ + PI C+V+ T P +E K+ R DIRNIAI+A Sbjct: 33 RNKLFGLSLSSSKPTLRIASRNNNINPIK-CSVSEVTEPITEEKRKLMRRADIRNIAIVA 91
Query: 365 HVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITILSKNTAIRYKGTKINI 544 HVDHGKTTLVDAMLKQ KVFR+NQ VQER+MDSN LERERGITILSKNT++ YK KINI Sbjct: 92 HVDHGKTTLVDAMLKQTKVFRDNQTVQERIMDSNDLERERGITILSKNTSVTYKDAKINI 151
Query: 545 IDTPGHSDFGGEVERVL 595 IDTPGHSDFGGEVER+L Sbjct: 152 IDTPGHSDFGGEVERIL 168
>tr|A9REI5|A9REI5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65080 PE=4 SV=1 Length = 626
Score = 168 bits (425), Expect = 2e-40 Identities = 82/92 (89%), Positives = 88/92 (95%) Frame = +2
Query: 320 KVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITIL 499 K VR D+RNIAI+AHVDHGKTTLVDAML+QAKVFR+NQ+VQER+MDSN LERERGITIL Sbjct: 26 KTSVRTDVRNIAIVAHVDHGKTTLVDAMLRQAKVFRDNQSVQERIMDSNDLERERGITIL 85
Query: 500 SKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 SKNTAIRYKGTKINIIDTPGHSDFGGEVERVL Sbjct: 86 SKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 117
>tr|A9SWN7|A9SWN7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_232741 PE=4 SV=1 Length = 599
Score = 166 bits (419), Expect = 1e-39 Identities = 81/91 (89%), Positives = 88/91 (96%) Frame = +2
Query: 323 VKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITILS 502 + +R DIRNIAI+AHVDHGKTTLVDAML+QAKVFR+NQ+VQER+MDSN LERERGITILS Sbjct: 1 MSLRSDIRNIAIVAHVDHGKTTLVDAMLRQAKVFRDNQSVQERIMDSNDLERERGITILS 60
Query: 503 KNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 KNTAIRYKGTKINIIDTPGHSDFGGEVERVL Sbjct: 61 KNTAIRYKGTKINIIDTPGHSDFGGEVERVL 91
>tr|A9YT54|A9YT54_SUASA Tyrosine phosphorylated protein A OS=Suaeda salsa GN=TypA PE=2 SV=1 Length = 683
Score = 165 bits (418), Expect = 2e-39 Identities = 83/108 (76%), Positives = 95/108 (87%), Gaps = 2/108 (1%) Frame = +2
Query: 278 CNVATTTA--PAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQER 451 C+ A T A P+++ G++ R DIRNIAI+AHVDHGKTTLVD+MLKQAKVFR+NQ VQER Sbjct: 68 CSAAGTAAATPSEKKGQLMRRNDIRNIAIVAHVDHGKTTLVDSMLKQAKVFRDNQTVQER 127
Query: 452 VMDSNALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 +MDSN LERERGITILSKNT+I YK TKINIIDTPGHSDFGGEVER+L Sbjct: 128 IMDSNDLERERGITILSKNTSIGYKDTKINIIDTPGHSDFGGEVERIL 175
>tr|A9PF30|A9PF30_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 696
Score = 164 bits (415), Expect = 4e-39 Identities = 82/114 (71%), Positives = 97/114 (85%) Frame = +2
Query: 254 SLNGPIPTCNVATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFREN 433 S + PI C+V+T + ++ ++ R DIRNIAI+AHVDHGKTTLVDAMLKQ+KVFR+N Sbjct: 60 SFHSPIK-CSVSTEASTTEKRSQMMRRGDIRNIAIVAHVDHGKTTLVDAMLKQSKVFRDN 118
Query: 434 QAVQERVMDSNALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 Q VQER+MDSN +ERERGITILSKNT+I YK TKINIIDTPGHSDFGGEVER+L Sbjct: 119 QFVQERIMDSNDIERERGITILSKNTSITYKDTKINIIDTPGHSDFGGEVERIL 172
>tr|Q6KA61|Q6KA61_ORYSJ Os02g0285800 protein OS=Oryza sativa subsp. japonica GN=OJ1115_D03.25 PE=4 SV=1 Length = 669
Score = 160 bits (406), Expect = 4e-38 Identities = 80/104 (76%), Positives = 88/104 (84%) Frame = +2
Query: 284 VATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDS 463 V +PA R D+RNIAI+AHVDHGKTTLVD+ML+QAKVFR+NQ VQER+MDS Sbjct: 58 VKERASPAAGKSGQATRRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDS 117
Query: 464 NALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 N LERERGITILSKNT+I YKGTKINIIDTPGHSDFGGEVERVL Sbjct: 118 NDLERERGITILSKNTSITYKGTKINIIDTPGHSDFGGEVERVL 161
>tr|B8AFM9|B8AFM9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06773 PE=4 SV=1 Length = 661
Score = 160 bits (406), Expect = 4e-38 Identities = 80/104 (76%), Positives = 88/104 (84%) Frame = +2
Query: 284 VATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDS 463 V +PA R D+RNIAI+AHVDHGKTTLVD+ML+QAKVFR+NQ VQER+MDS Sbjct: 58 VKERASPAAGKSGQATRRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDS 117
Query: 464 NALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 N LERERGITILSKNT+I YKGTKINIIDTPGHSDFGGEVERVL Sbjct: 118 NDLERERGITILSKNTSITYKGTKINIIDTPGHSDFGGEVERVL 161
>tr|A3A5M0|A3A5M0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006092 PE=4 SV=1 Length = 703
Score = 160 bits (406), Expect = 4e-38 Identities = 80/104 (76%), Positives = 88/104 (84%) Frame = +2
Query: 284 VATTTAPAKEAGKVKVRPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDS 463 V +PA R D+RNIAI+AHVDHGKTTLVD+ML+QAKVFR+NQ VQER+MDS Sbjct: 100 VKERASPAAGKSGQATRRDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDS 159
Query: 464 NALERERGITILSKNTAIRYKGTKINIIDTPGHSDFGGEVERVL 595 N LERERGITILSKNT+I YKGTKINIIDTPGHSDFGGEVERVL Sbjct: 160 NDLERERGITILSKNTSITYKGTKINIIDTPGHSDFGGEVERVL 203
>tr|A7PWD3|A7PWD3_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025567001 PE=4 SV=1 Length = 597
Score = 157 bits (398), Expect = 3e-37 Identities = 78/88 (88%), Positives = 83/88 (94%) Frame = +2
Query: 332 RPDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRENQAVQERVMDSNALERERGITILSKNT 511 R DIRNIAI+AHVDHGKTTLVDAMLKQAKVFR+NQ VQER+MDSN LERERGITILSKNT Sbjct: 3 RRDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQFVQERIMDSNDLERERGITILSKNT 62
Query: 512 AIRYKGTKINIIDTPGHSDFGGEVERVL 595 +I YK TKINIIDTPGHSDFGGEVER+L Sbjct: 63 SIGYKDTKINIIDTPGHSDFGGEVERIL 90
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