DK951901 |
Clone id |
TST38A01NGRL0012_K06 |
Library |
TST38 |
Length |
656 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_K06. 5' end sequence. |
Accession |
DK951901 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL57Contig1 |
Sequence |
GCTGCTACAGCCATGGCGTGTTTCGCTGCTGCTTCCGCAGCCATCTCCTCCTCCTCTTTT GCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTCTTCCTCCGTTTCTGGCTCTCGCCTT TGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCGCGCCCGCTCGTCGTCCGTGTCTGCT GCACTGTATTCTGATTCCTCATATGACCTTTCCTCCTTCAAGTTTGAGCCCATTCGGGAA TCCATTGTTGCCCGTGAGATGACCCGCCGCTACATGACAGACATGATCACCCATGCAGAC ACTGATGTTGTGGTTGTGGGTGCTGGTTCTGCTGGCCTGTCATGTGCGTATGAGCTCAGC AAGAACCCCAACGTCAAGGTTGCCATTGTGGAGCAGTCTGTAAGCCCAGGTGGTGGAGCT TGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGTAAGGAAGCCAGCCCACCTCTTCCTT GATGAGATTGGTGTGCCCTACGATGAGAAGGATACCTATGTTGTTATCAAGCATGCTGCG CTCTTCACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCAAATGTGAAGCTCTTTAAT GCGGTTGCTGCAGAGGATCTGATAATTAAAGAGAATCGTGTAGCGGGTGTGGTCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
146 |
Score (bit) |
254.0 |
E-value |
2.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951901|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_K06, 5' (656 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 254 2e-67 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 253 5e-67 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 244 2e-64 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 241 3e-63 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 238 2e-62 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 194 3e-49 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 189 1e-47 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 184 5e-46 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 183 6e-46 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 179 1e-44 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 174 3e-43 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 102 2e-21 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 99 2e-20 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 96 2e-19 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 91 4e-18 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 90 1e-17 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 81 4e-15 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 78 5e-14 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 77 8e-14 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 75 2e-13 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 75 2e-13 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 75 3e-13 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 74 7e-13 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 73 1e-12 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 72 3e-12 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 72 3e-12 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 71 4e-12 sp|Q58018|THI4_METJA Putative thiazole biosynthetic enzyme OS=Me... 69 3e-11 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 67 8e-11 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 67 1e-10
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 254 bits (650), Expect = 2e-67 Identities = 123/146 (84%), Positives = 137/146 (93%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 396 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 397 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 576 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 577 RPNVKLFNAVAAEDLIIKENRVAGVV 654 RPNVKLFNAVAAEDLI+K RV GVV Sbjct: 183 RPNVKLFNAVAAEDLIVKGGRVGGVV 208
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 253 bits (647), Expect = 5e-67 Identities = 126/146 (86%), Positives = 137/146 (93%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 396 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 397 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 576 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 577 RPNVKLFNAVAAEDLIIKENRVAGVV 654 RPNVKLFNAVAAEDLI+K NRV GVV Sbjct: 176 RPNVKLFNAVAAEDLIVKGNRVGGVV 201
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 244 bits (624), Expect = 2e-64 Identities = 119/146 (81%), Positives = 132/146 (90%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 396 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 397 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 576 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 577 RPNVKLFNAVAAEDLIIKENRVAGVV 654 RPNVKLFNAVA EDLI++ RV GVV Sbjct: 179 RPNVKLFNAVAVEDLIVRRGRVGGVV 204
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 241 bits (614), Expect = 3e-63 Identities = 119/146 (81%), Positives = 131/146 (89%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 396 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 397 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 576 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 577 RPNVKLFNAVAAEDLIIKENRVAGVV 654 RPNVKLFNAVA EDLI++ RV GVV Sbjct: 182 RPNVKLFNAVAVEDLIVRGGRVGGVV 207
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 238 bits (608), Expect = 2e-62 Identities = 119/146 (81%), Positives = 132/146 (90%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 396 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 397 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 576 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 577 RPNVKLFNAVAAEDLIIKENRVAGVV 654 RPNVKLFNAVAAEDLI+K RV GVV Sbjct: 179 RPNVKLFNAVAAEDLIVKGGRVGGVV 204
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 194 bits (494), Expect = 3e-49 Identities = 97/152 (63%), Positives = 123/152 (80%), Gaps = 6/152 (3%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 393 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 394 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 573 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 574 ARPNVKLFNAVAAEDLIIKE-----NRVAGVV 654 A PNVKLFNA A EDLI+KE R+AGVV Sbjct: 169 ALPNVKLFNATAVEDLIVKEGKDGKQRIAGVV 200
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 189 bits (480), Expect = 1e-47 Identities = 97/151 (64%), Positives = 117/151 (77%), Gaps = 5/151 (3%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 393 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 394 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 573 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 574 ARPNVKLFNAVAAEDLIIKEN----RVAGVV 654 PN+KLFNA EDLI + + R+AGVV Sbjct: 164 QMPNIKLFNATCVEDLITRPSEEGVRIAGVV 194
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 184 bits (466), Expect = 5e-46 Identities = 98/154 (63%), Positives = 122/154 (79%), Gaps = 8/154 (5%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 393 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 394 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 567 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 568 LLARPNVKLFNAVAAEDLIIK--EN---RVAGVV 654 +L+ PNVKLFNA A EDLI + EN ++AGVV Sbjct: 168 VLSFPNVKLFNATAVEDLITRPTENGNPQIAGVV 201
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 183 bits (465), Expect = 6e-46 Identities = 94/151 (62%), Positives = 115/151 (76%), Gaps = 5/151 (3%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 393 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 394 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 573 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 574 ARPNVKLFNAVAAEDLIIKEN----RVAGVV 654 PN KLFNA EDLI + + R++GVV Sbjct: 168 QLPNCKLFNATCVEDLITRPSKEGVRISGVV 198
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 179 bits (454), Expect = 1e-44 Identities = 91/153 (59%), Positives = 115/153 (75%), Gaps = 7/153 (4%) Frame = +1
Query: 217 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 393 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 394 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 573 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 574 ARPNVKLFNAVAAEDLIIK------ENRVAGVV 654 PNVKLFNA EDL+ + E VAGVV Sbjct: 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVV 190
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
146 |
Score (bit) |
263.0 |
E-value |
7.0e-69 |
Report |
|