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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK951904
Clone id TST38A01NGRL0012_K10
Library
Length 493
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_K10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGC
AGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCG
ACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGT
ACTGGGTGATGTGGAAGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTG
AAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACG
CTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAAACTTTCT
TAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCCCACTGGCGCCTAAC
AAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCATACATAATGAAACAACTTC
CCAGTGGTGGCTT
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 115
Score (bit) 165.0
E-value 9.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951904|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_K10, 5'
         (493 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   165   9e-41
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   164   2e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   161   1e-39
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   161   2e-39
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   160   2e-39
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   159   5e-39
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   159   5e-39
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   159   6e-39
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   159   8e-39
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   159   8e-39
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   158   1e-38
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   158   1e-38
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   158   1e-38
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   158   1e-38
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   157   2e-38
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   157   2e-38
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   157   2e-38
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   157   2e-38
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   157   2e-38
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   157   2e-38
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   157   2e-38
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   157   3e-38
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   157   3e-38

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  165 bits (418), Expect = 9e-41
 Identities = 72/115 (62%), Positives = 89/115 (77%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGR 179
           P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGR
Sbjct: 63  PIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGR 122

Query: 180 YWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           YW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 123 YWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  164 bits (416), Expect = 2e-40
 Identities = 70/114 (61%), Positives = 88/114 (77%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P   KKFETLSYLPPL+ EQ+ ++VD+++R GW PCIEF K+G VYRE+ +  GYYDGRY
Sbjct: 62  PEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRY 121

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           W MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 122 WTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  164 bits (416), Expect = 2e-40
 Identities = 74/115 (64%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGR 179
           P   KKFETLSYLPPLSSEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGR
Sbjct: 65  PLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGR 124

Query: 180 YWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           YW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 125 YWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  161 bits (408), Expect = 1e-39
 Identities = 69/110 (62%), Positives = 85/110 (77%)
 Frame = +3

Query: 15  KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 194
           KKFETLSYLPPLS+E ++KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MW
Sbjct: 56  KKFETLSYLPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 115

Query: 195 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           KLPMFGC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  161 bits (407), Expect = 2e-39
 Identities = 68/110 (61%), Positives = 84/110 (76%)
 Frame = +3

Query: 15  KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 194
           KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G ++REH    GYYDGRYW MW
Sbjct: 56  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMW 115

Query: 195 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           KLPMFGC DA  VL E+ E  KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 116 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  161 bits (407), Expect = 2e-39
 Identities = 69/110 (62%), Positives = 84/110 (76%)
 Frame = +3

Query: 15  KKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMW 194
           KKFETLSYLPPLS+E + KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MW
Sbjct: 57  KKFETLSYLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMW 116

Query: 195 KLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           KLPMFGC DA  VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  160 bits (406), Expect = 2e-39
 Identities = 69/114 (60%), Positives = 88/114 (77%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P+ N KFETLSYLP L+ EQ+ K+V++++R  W PC+EFD  GS+ R++    GYYDGRY
Sbjct: 57  PFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRY 116

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           WVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ   F+V KP
Sbjct: 117 WVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  160 bits (405), Expect = 3e-39
 Identities = 71/115 (61%), Positives = 85/115 (73%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRY
Sbjct: 63  PEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRY 122

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           W MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 123 WTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  160 bits (405), Expect = 3e-39
 Identities = 71/115 (61%), Positives = 85/115 (73%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRY
Sbjct: 63  PEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRY 122

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           W MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 123 WTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  160 bits (405), Expect = 3e-39
 Identities = 71/115 (61%), Positives = 85/115 (73%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P   KKFETLSYLPPLS E +AK+VD+++R  W PCIEF K G VYRE+    GYYDGRY
Sbjct: 63  PEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRY 122

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           W MWKLPMFGC DA+ V+ E+ E  K YPE F+R++GFD KRQVQ   F+  KP+
Sbjct: 123 WTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 115
Score (bit) 225.0
E-value 7.0e-58
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951904|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_K10, 5'
         (493 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   225   7e-58
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   168   1e-40
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   167   2e-40
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   166   7e-40
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   166   7e-40
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   164   2e-39
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   163   3e-39
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   163   5e-39
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   163   5e-39
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   162   6e-39
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   162   6e-39
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   162   1e-38
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   161   1e-38
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c...   160   2e-38
tr|Q9ZWG2|Q9ZWG2_BROCA Ribulose bisphosphate carboxylase small c...   160   2e-38

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  225 bits (574), Expect = 7e-58
 Identities = 101/115 (87%), Positives = 111/115 (96%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           PYDNKKFETLSYLPPL+++QIAKQV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRY
Sbjct: 59  PYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRY 118

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           W+MWKLPMFGC D+ +VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 119 WIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  168 bits (426), Expect = 1e-40
 Identities = 72/114 (63%), Positives = 89/114 (78%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P +NKKFE LSYLPPLS + IAK++D+M++KGW PC+EFD++GSV REH    GYYDGRY
Sbjct: 55  PINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRY 114

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           W +WKLPMFGC D++ VL EI EC K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 115 WTLWKLPMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  167 bits (424), Expect = 2e-40
 Identities = 72/115 (62%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGR 179
           P   KK+ETLSYLPPLS E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGR
Sbjct: 63  PIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGR 122

Query: 180 YWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           YW MWKLPMFGC D+A V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 123 YWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  166 bits (419), Expect = 7e-40
 Identities = 75/118 (63%), Positives = 92/118 (77%), Gaps = 3/118 (2%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYD 173
           P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYD
Sbjct: 62  PIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYD 121

Query: 174 GRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           GRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 122 GRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  166 bits (419), Expect = 7e-40
 Identities = 75/118 (63%), Positives = 92/118 (77%), Gaps = 3/118 (2%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYD 173
           P    KFET SYLPPL+ +QIAKQVDFM+++   PCIEFD +GSV R +F G   SGYYD
Sbjct: 62  PIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYD 121

Query: 174 GRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           GRYW MWKLPMFGC D+A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 122 GRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small
           chain OS=Vitis vinifera GN=GSVIVT00031354001 PE=3 SV=1
          Length = 169

 Score =  165 bits (417), Expect = 1e-39
 Identities = 70/115 (60%), Positives = 90/115 (78%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P +NKKFETLSYLPPLS + IAK++D+M++KGW PC+EFD++G V+R++    GYYDGRY
Sbjct: 53  PINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVFRKNSQIPGYYDGRY 112

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           W +WKLPMFGC DA+ VL EI EC K YP A+IR L FD + Q Q   F++QKP+
Sbjct: 113 WTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIRCLAFDNEHQGQCMAFVIQKPT 167


>tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=P0463E12.1 PE=3
           SV=1
          Length = 183

 Score =  164 bits (416), Expect = 2e-39
 Identities = 66/114 (57%), Positives = 91/114 (79%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P+ N+++E +SYLPPLS++ I+K+++F++ KGW PC+EFDK G ++R +    GYYDGRY
Sbjct: 56  PFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRY 115

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           W +WKLPMFGC DAAAVLRE+ EC +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 116 WTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKP 169


>tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05882 PE=4 SV=1
          Length = 183

 Score =  164 bits (416), Expect = 2e-39
 Identities = 66/114 (57%), Positives = 91/114 (79%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P+ N+++E +SYLPPLS++ I+K+++F++ KGW PC+EFDK G ++R +    GYYDGRY
Sbjct: 56  PFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRY 115

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           W +WKLPMFGC DAAAVLRE+ EC +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 116 WTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKP 169


>tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=OsJ_005253 PE=3
           SV=1
          Length = 234

 Score =  164 bits (416), Expect = 2e-39
 Identities = 66/114 (57%), Positives = 91/114 (79%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRY 182
           P+ N+++E +SYLPPLS++ I+K+++F++ KGW PC+EFDK G ++R +    GYYDGRY
Sbjct: 107 PFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRY 166

Query: 183 WVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 344
           W +WKLPMFGC DAAAVLRE+ EC +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 167 WTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKP 220


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  164 bits (415), Expect = 2e-39
 Identities = 73/118 (61%), Positives = 92/118 (77%), Gaps = 3/118 (2%)
 Frame = +3

Query: 3   PYDNKKFETLSYLPPLSSEQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYD 173
           P    KFET SYLPPL+ +QIAKQVD+M+++   PCIEFD +GSV R +F G   SGYYD
Sbjct: 97  PIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYD 156

Query: 174 GRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 347
           GRYW MWKLPMFGC D++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 157 GRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214