DK951948 |
Clone id |
TST38A01NGRL0012_M10 |
Library |
TST38 |
Length |
611 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_M10. 5' end sequence. |
Accession |
DK951948 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1745Contig1 |
Sequence |
CGTGGGTGTCTCTAAAACGAGGCAATGGGCTCATTGTGGGGCATCCGCATGCACCCCATT TCCCATATCACAAGGATGAAACGTATTGGCTGTTACTGGCAGACACGAGCAAGAACTTCA TTTGGGTATCACAACGTGTCTCATTTTTGGATGAGTCGGCTGCTATTTTGGCTGCCTCAA AGTCCCTACAAGAAGCCATGGAAGGAACGGGAGCTAGTGACACAGAAGTTAACAAGGCTG TGAAGGAAGCGGTTGCTAAAGTACGGTCTGGTTCTAGGCTATCGGTGGTGAAATTCCAAG CACCTGCTGAGGGGAACTATAATTTGACTTCCTTCTGCTTGTCAGATACGTGGATTGGCT GTGACAAGAAGATGAATGTGAAGTTAAAAGTAAGCAAGCGTAGCCGGGCGGGCACCCGAG GGATGCTATCTGATGAAGGTGGGGCACTGGCAGAAGAAGTGGAGGAGGAGGAAGAGGAAG AAGCAGCATATGATGAAGATTATGAGAGTGAATACAGCGAAGATGAGGATGACCAGAAGT CGAAGGACTCCAAGAAGGAGCCAGTTGAGCAAAAACAGAGTTCTGATGATGATGAGGATG ATGGGTCGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9U2G0 |
Definition |
sp|Q9U2G0|U520_CAEEL Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Caenorhabditis elegans |
Align length |
141 |
Score (bit) |
37.0 |
E-value |
0.08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TIY0 |
Definition |
tr|A9TIY0|A9TIY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
149 |
Score (bit) |
197.0 |
E-value |
3.0e-49 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951948|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_M10, 5' (611 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TIY0|A9TIY0_PHYPA Predicted protein OS=Physcomitrella paten... 197 3e-49 tr|Q9SSD9|Q9SSD9_ARATH F18B13.2 protein OS=Arabidopsis thaliana ... 189 8e-47 tr|Q9CA96|Q9CA96_ARATH Putative DnaJ protein; 34157-30943 OS=Ara... 189 8e-47 tr|Q0WT48|Q0WT48_ARATH Putative DnaJ protein OS=Arabidopsis thal... 189 8e-47 tr|Q0WL47|Q0WL47_ARATH Putative DnaJ protein OS=Arabidopsis thal... 189 8e-47 tr|Q7XVN7|Q7XVN7_ORYSJ Os04g0307200 protein OS=Oryza sativa subs... 182 2e-44 tr|Q01MF9|Q01MF9_ORYSA OSIGBa0125J07.5 protein OS=Oryza sativa G... 182 2e-44 tr|A2XRR9|A2XRR9_ORYSI Putative uncharacterized protein OS=Oryza... 182 2e-44 tr|A7QG99|A7QG99_VITVI Chromosome undetermined scaffold_91, whol... 181 4e-44 tr|A9P7Y5|A9P7Y5_POPTR Putative uncharacterized protein OS=Popul... 178 2e-43 tr|Q949Z5|Q949Z5_ARATH Putative uncharacterized protein At4g2118... 151 3e-35 tr|O49559|O49559_ARATH Putative uncharacterized protein AT4g2118... 151 3e-35 tr|B5YNG2|B5YNG2_THAPS RNA or DNA helicase OS=Thalassiosira pseu... 50 1e-04 tr|B7G2L8|B7G2L8_PHATR Predicted protein OS=Phaeodactylum tricor... 47 9e-04 tr|A9UYS5|A9UYS5_MONBE Predicted protein OS=Monosiga brevicollis... 47 9e-04 tr|A0BQ90|A0BQ90_PARTE Chromosome undetermined scaffold_120, who... 47 9e-04 tr|A0BKV6|A0BKV6_PARTE Chromosome undetermined scaffold_113, who... 46 0.001 tr|A8JI25|A8JI25_CHLRE RNA helicase, activating signal cointegra... 46 0.002 tr|B3RYG0|B3RYG0_TRIAD Putative uncharacterized protein OS=Trich... 44 0.007 tr|A7AM78|A7AM78_BABBO Sec63 domain containing protein OS=Babesi... 40 0.14 tr|Q9FNQ1|Q9FNQ1_ARATH RNA helicase OS=Arabidopsis thaliana PE=4... 39 0.18 tr|Q8RY91|Q8RY91_ARATH Putative RNA helicase (Fragment) OS=Arabi... 39 0.18 tr|B1H1S2|B1H1S2_XENLA LOC100158290 protein OS=Xenopus laevis GN... 39 0.24 tr|B0BMR2|B0BMR2_XENTR LOC100145098 protein (Fragment) OS=Xenopu... 39 0.24 tr|A7PDB5|A7PDB5_VITVI Chromosome chr17 scaffold_12, whole genom... 39 0.31 tr|A5BGX4|A5BGX4_VITVI Putative uncharacterized protein OS=Vitis... 39 0.31 tr|Q6BI73|Q6BI73_DEBHA DEHA2G12892p OS=Debaryomyces hansenii GN=... 39 0.31 tr|Q0E4P2|Q0E4P2_ORYSJ Os02g0107000 protein (Fragment) OS=Oryza ... 38 0.40 tr|A3A293|A3A293_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.40 tr|A2WZV9|A2WZV9_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.40
>tr|A9TIY0|A9TIY0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170320 PE=4 SV=1 Length = 697
Score = 197 bits (502), Expect = 3e-49 Identities = 94/149 (63%), Positives = 114/149 (76%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 W++L R NGL+ HPHAPHFPY KDE YWLLLADT N +WVSQR++F DE+AA+ A++K Sbjct: 482 WITLHRPNGLVNCHPHAPHFPYFKDEHYWLLLADTQANSVWVSQRITFTDEAAALSASAK 541
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++QE++EGTGA D EV+ +SGSRL V KFQAPAEG YNLT+FCLSDTWIG Sbjct: 542 TIQESLEGTGADDAEVSKAVREAVEKVKSGSRLVVAKFQAPAEGIYNLTAFCLSDTWIGV 601
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEGGAL 449 D+K+NVK KV KRSRAGTR +L E L Sbjct: 602 DRKVNVKFKVLKRSRAGTRVVLPSEESPL 630
>tr|Q9SSD9|Q9SSD9_ARATH F18B13.2 protein OS=Arabidopsis thaliana GN=F18B13.2 PE=4 SV=1 Length = 719
Score = 189 bits (481), Expect = 8e-47 Identities = 89/146 (60%), Positives = 109/146 (74%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W SQ+VSFLDE AI AASK Sbjct: 509 WVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVWFSQKVSFLDEGGAITAASK 568
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++ E+MEG+GA E N + GSRL + K QAPAEG YNLT FCL DTWIGC Sbjct: 569 AISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAPAEGTYNLTCFCLCDTWIGC 628
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEG 440 DKK +K+KV KR+RAGTRG++SDEG Sbjct: 629 DKKQALKVKVLKRTRAGTRGLVSDEG 654
>tr|Q9CA96|Q9CA96_ARATH Putative DnaJ protein; 34157-30943 OS=Arabidopsis thaliana GN=At1g79940 PE=4 SV=1 Length = 702
Score = 189 bits (481), Expect = 8e-47 Identities = 89/146 (60%), Positives = 109/146 (74%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W SQ+VSFLDE AI AASK Sbjct: 492 WVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVWFSQKVSFLDEGGAITAASK 551
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++ E+MEG+GA E N + GSRL + K QAPAEG YNLT FCL DTWIGC Sbjct: 552 AISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAPAEGTYNLTCFCLCDTWIGC 611
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEG 440 DKK +K+KV KR+RAGTRG++SDEG Sbjct: 612 DKKQALKVKVLKRTRAGTRGLVSDEG 637
>tr|Q0WT48|Q0WT48_ARATH Putative DnaJ protein OS=Arabidopsis thaliana GN=At1g79940 PE=2 SV=1 Length = 687
Score = 189 bits (481), Expect = 8e-47 Identities = 89/146 (60%), Positives = 109/146 (74%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W SQ+VSFLDE AI AASK Sbjct: 477 WVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVWFSQKVSFLDEGGAITAASK 536
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++ E+MEG+GA E N + GSRL + K QAPAEG YNLT FCL DTWIGC Sbjct: 537 AISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAPAEGTYNLTCFCLCDTWIGC 596
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEG 440 DKK +K+KV KR+RAGTRG++SDEG Sbjct: 597 DKKQALKVKVLKRTRAGTRGLVSDEG 622
>tr|Q0WL47|Q0WL47_ARATH Putative DnaJ protein OS=Arabidopsis thaliana GN=At1g79940 PE=2 SV=1 Length = 463
Score = 189 bits (481), Expect = 8e-47 Identities = 89/146 (60%), Positives = 109/146 (74%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WV+LKR NGL+ PHAP+FP+HK+E YW+LLAD+ N +W SQ+VSFLDE AI AASK Sbjct: 253 WVTLKRPNGLVGALPHAPYFPFHKEENYWVLLADSVSNNVWFSQKVSFLDEGGAITAASK 312
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++ E+MEG+GA E N + GSRL + K QAPAEG YNLT FCL DTWIGC Sbjct: 313 AISESMEGSGAGVKETNDAVREAIEKVKGGSRLVMGKLQAPAEGTYNLTCFCLCDTWIGC 372
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEG 440 DKK +K+KV KR+RAGTRG++SDEG Sbjct: 373 DKKQALKVKVLKRTRAGTRGLVSDEG 398
>tr|Q7XVN7|Q7XVN7_ORYSJ Os04g0307200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0023J03.11 PE=4 SV=2 Length = 681
Score = 182 bits (461), Expect = 2e-44 Identities = 86/146 (58%), Positives = 106/146 (72%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WVSL R NGL PHAP FP+HK+E +WLLLAD + N +W+SQ+VSF+DE+ AI AASK Sbjct: 477 WVSLHRRNGLTAALPHAPSFPFHKEENFWLLLADAASNEVWLSQKVSFMDETTAITAASK 536
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++QE E GAS E+ + GSRL + KFQAPAEG +NLTSFCL D WIGC Sbjct: 537 AIQETQEALGASAKEIGIAIREAVDRVKKGSRLVMGKFQAPAEGTHNLTSFCLCDAWIGC 596
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEG 440 D K ++KLKV KRSRAGTRG +++EG Sbjct: 597 DTKTSLKLKVLKRSRAGTRGHVAEEG 622
>tr|Q01MF9|Q01MF9_ORYSA OSIGBa0125J07.5 protein OS=Oryza sativa GN=OSIGBa0125J07.5 PE=4 SV=1 Length = 681
Score = 182 bits (461), Expect = 2e-44 Identities = 86/146 (58%), Positives = 106/146 (72%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WVSL R NGL PHAP FP+HK+E +WLLLAD + N +W+SQ+VSF+DE+ AI AASK Sbjct: 477 WVSLHRRNGLTAALPHAPSFPFHKEENFWLLLADAASNEVWLSQKVSFMDETTAITAASK 536
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++QE E GAS E+ + GSRL + KFQAPAEG +NLTSFCL D WIGC Sbjct: 537 AIQETQEALGASAKEIGIAIREAVDRVKKGSRLVMGKFQAPAEGTHNLTSFCLCDAWIGC 596
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEG 440 D K ++KLKV KRSRAGTRG +++EG Sbjct: 597 DTKTSLKLKVLKRSRAGTRGHVAEEG 622
>tr|A2XRR9|A2XRR9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15323 PE=4 SV=1 Length = 681
Score = 182 bits (461), Expect = 2e-44 Identities = 86/146 (58%), Positives = 106/146 (72%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WVSL R NGL PHAP FP+HK+E +WLLLAD + N +W+SQ+VSF+DE+ AI AASK Sbjct: 477 WVSLHRRNGLTAALPHAPSFPFHKEENFWLLLADAASNEVWLSQKVSFMDETTAITAASK 536
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++QE E GAS E+ + GSRL + KFQAPAEG +NLTSFCL D WIGC Sbjct: 537 AIQETQEALGASAKEIGIAVREAVDRVKKGSRLVMGKFQAPAEGTHNLTSFCLCDAWIGC 596
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEG 440 D K ++KLKV KRSRAGTRG +++EG Sbjct: 597 DTKTSLKLKVLKRSRAGTRGHVAEEG 622
>tr|A7QG99|A7QG99_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037758001 PE=4 SV=1 Length = 688
Score = 181 bits (458), Expect = 4e-44 Identities = 86/150 (57%), Positives = 114/150 (76%), Gaps = 1/150 (0%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 WV+LKR NGLI PHAP+FP+HK+E +W LLAD N +W SQ++SF+DE+AAI AASK Sbjct: 477 WVTLKRTNGLIGALPHAPYFPFHKEENFWFLLADPVSNNVWFSQKMSFMDEAAAITAASK 536
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++++ MEG+GAS E + ++GSRL + K QAPAEGNYNL+ FCL D+WIGC Sbjct: 537 AIEDTMEGSGASVKETSAAVREAVDKVKAGSRLVMGKLQAPAEGNYNLSCFCLCDSWIGC 596
Query: 363 DKKMNVKLKVSKRSRAGTR-GMLSDEGGAL 449 DKK+N+K+KV KR+RAGTR G +++EG L Sbjct: 597 DKKINLKVKVVKRTRAGTRGGPVAEEGPIL 626
>tr|A9P7Y5|A9P7Y5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 685
Score = 178 bits (452), Expect = 2e-43 Identities = 82/149 (55%), Positives = 108/149 (72%) Frame = +3
Query: 3 WVSLKRGNGLIVGHPHAPHFPYHKDETYWLLLADTSKNFIWVSQRVSFLDESAAILAASK 182 W++LKR NGL+ PHAP FP+HK+E +W LLAD + N +W SQ+V+F+DE+AAI ASK Sbjct: 477 WITLKRANGLVGALPHAPSFPFHKEENFWFLLADAASNDVWFSQKVNFMDEAAAITGASK 536
Query: 183 SLQEAMEGTGASDTEVNXXXXXXXXXXRSGSRLSVVKFQAPAEGNYNLTSFCLSDTWIGC 362 ++++ MEG+GAS E + R GSRL + K APAEGNYNLT +CL D+WIGC Sbjct: 537 TIEDTMEGSGASVRETSAAVREAVEKVRGGSRLVMGKLPAPAEGNYNLTCYCLCDSWIGC 596
Query: 363 DKKMNVKLKVSKRSRAGTRGMLSDEGGAL 449 DKK ++K+KV KR+RAGTRG L E G + Sbjct: 597 DKKTSLKVKVLKRTRAGTRGGLVSEEGPI 625
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