DK951973 |
Clone id |
TST38A01NGRL0012_N11 |
Library |
TST38 |
Length |
621 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_N11. 5' end sequence. |
Accession |
DK951973 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL717Contig1 |
Sequence |
CACTATCTCCAGCCTCGAAAAGATCTGACGCCTTCAGCATTTGTGAGCGGCAATGGCGTC CTTGAGGTCTTTCGTCGCTTTGCCCAATACGTCCTCTCACCACGTTCGCGCTTCTTTCTC AGGTCAAAACCGCCCTCTGCGCCCTCTGCGCATACGCGCAAGCACAGGGACCGAACAAAG TGTCAAACCAGCCATTACTTTGTCCACAAAGGCTCTCAGTCATCTGAACAAGATGAGGAC AGATCTCAATCAAGACCTTTGCCTCAGAGTAGGAGTTCGACAAGGAGGTTGCTCTGGTAT GTCATACACTATGGATTTTGAACAGCGGTCAAACATACGATCAGATGACTCTATCATTGA CTCTGAAGGGTTTACCATGGTTTGCGATCCGAAGAGCTTGCTTTATCTGTATGGGATGCA ACTAGATTACAGTGACTCCCTTATTGGTGGTGGCTTCTCTTTCAGTAACCCGAATGCGAC GTCAACATGTGGCTGTGGAAAGTCGTTTGCTGCATGAAGTTTATTTGAGAACTTTCTAAG TAGCCATCTTTGTGTATTTTAAGTTCTTCTATGTTTTAGCAATTGTACACTTCAGACCCA GTAACCATCATTAAACCTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XIK3 |
Definition |
sp|Q9XIK3|ISCAP_ARATH Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana |
Align length |
156 |
Score (bit) |
177.0 |
E-value |
5.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951973|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_N11, 5' (621 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9XIK3|ISCAP_ARATH Iron-sulfur assembly protein IscA, chlorop... 177 5e-44 sp|P72731|Y1417_SYNY3 Uncharacterized protein slr1417 OS=Synecho... 139 2e-32 sp|P51217|YCF83_PORPU Uncharacterized protein ycf83 OS=Porphyra ... 131 3e-30 sp|Q1XDR9|YCF83_PORYE Uncharacterized protein ycf83 OS=Porphyra ... 129 2e-29 sp|Q9MSA1|YCF83_GALSU Uncharacterized protein ycf83 OS=Galdieria... 122 2e-27 sp|Q1GXC7|ERPA_METFK Putative iron-sulfur cluster insertion prot... 87 7e-17 sp|Q3BY98|ERPA_XANC5 Iron-sulfur cluster insertion protein erpA ... 86 1e-16 sp|Q8PQ32|ERPA_XANAC Iron-sulfur cluster insertion protein erpA ... 86 1e-16 sp|Q5H5J1|ERPA_XANOR Iron-sulfur cluster insertion protein erpA ... 86 2e-16 sp|Q2P884|ERPA_XANOM Iron-sulfur cluster insertion protein erpA ... 86 2e-16 sp|Q8PD57|ERPA_XANCP Iron-sulfur cluster insertion protein erpA ... 85 3e-16 sp|Q4UZE2|ERPA_XANC8 Iron-sulfur cluster insertion protein erpA ... 85 3e-16 sp|O32113|YUTM_BACSU Uncharacterized protein yutM OS=Bacillus su... 84 6e-16 sp|Q54VS1|ISCA1_DICDI Iron-sulfur cluster assembly 1 homolog, mi... 83 1e-15 sp|P64343|ERPA_XYLFT Iron-sulfur cluster insertion protein erpA ... 83 1e-15 sp|P64342|ERPA_XYLFA Iron-sulfur cluster insertion protein erpA ... 83 1e-15 sp|A0KNY6|ERPA_AERHH Iron-sulfur cluster insertion protein erpA ... 83 1e-15 sp|Q5P7U0|ERPA_AZOSE Putative iron-sulfur cluster insertion prot... 82 3e-15 sp|A8GHY1|ISCA_SERP5 Iron-binding protein iscA OS=Serratia prote... 81 4e-15 sp|A4SJ82|ERPA_AERS4 Iron-sulfur cluster insertion protein erpA ... 81 4e-15 sp|P44672|ISCA_HAEIN Iron-binding protein iscA OS=Haemophilus in... 81 5e-15 sp|Q65SZ6|ERPA_MANSM Iron-sulfur cluster insertion protein erpA ... 81 5e-15 sp|P45344|ERPA_HAEIN Iron-sulfur cluster insertion protein erpA ... 81 5e-15 sp|A5UBF7|ERPA_HAEIE Iron-sulfur cluster insertion protein erpA ... 81 5e-15 sp|Q3SF18|ERPA_THIDA Putative iron-sulfur cluster insertion prot... 80 6e-15 sp|Q7NRT6|ERPA_CHRVO Putative iron-sulfur cluster insertion prot... 80 6e-15 sp|Q124P0|ERPA_POLSJ Putative iron-sulfur cluster insertion prot... 80 1e-14 sp|A1JKQ4|ISCA_YERE8 Iron-binding protein iscA OS=Yersinia enter... 79 1e-14 sp|Q6LUS1|ERPA_PHOPR Iron-sulfur cluster insertion protein erpA ... 79 1e-14 sp|Q47IC1|ERPA_DECAR Putative iron-sulfur cluster insertion prot... 79 1e-14
>sp|Q9XIK3|ISCAP_ARATH Iron-sulfur assembly protein IscA, chloroplastic OS=Arabidopsis thaliana GN=ISCA PE=2 SV=2 Length = 180
Score = 177 bits (448), Expect = 5e-44 Identities = 91/156 (58%), Positives = 115/156 (73%), Gaps = 4/156 (2%) Frame = +2
Query: 59 SLRSFVALPNTSS---HHVRASFSGQNR-PLRPLRIRASTGTEQSVKPAITLSTKALSHL 226 SLRS V+ + S +V + + +NR +R + A+ E +KPAI+LS AL HL Sbjct: 24 SLRSVVSCNSISFPSLSYVNLNLNRRNRLSVRSASVPAAPAME-GLKPAISLSENALKHL 82
Query: 227 NKMRTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXXXXXXEGFTMVCDPKSLLY 406 +KMR++ +DLCLR+GV+QGGCSGMSYTMDFE R+N +GFT+VCDPKS+L+ Sbjct: 83 SKMRSERGEDLCLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLF 142
Query: 407 LYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFAA 514 L+GMQLDYSD+LIGGGFSFSNPNAT TCGCGKSFAA Sbjct: 143 LFGMQLDYSDALIGGGFSFSNPNATQTCGCGKSFAA 178
>sp|P72731|Y1417_SYNY3 Uncharacterized protein slr1417 OS=Synechocystis sp. (strain PCC 6803) GN=slr1417 PE=1 SV=1 Length = 118
Score = 139 bits (349), Expect = 2e-32 Identities = 65/105 (61%), Positives = 76/105 (72%) Frame = +2
Query: 194 ITLSTKALSHLNKMRTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXXXXXXEGF 373 I LS AL HL ++ +DLCLRVGVRQGGCSGMSY MDFE+ + EGF Sbjct: 12 IQLSDAALKHLLALKEQQGKDLCLRVGVRQGGCSGMSYMMDFEEPNRATEHDEVFDYEGF 71
Query: 374 TMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSF 508 ++CD KSLLYLYG+ LDYS++LIGGGF F+NPNA TCGCGKSF Sbjct: 72 QIICDRKSLLYLYGLMLDYSNALIGGGFQFTNPNANQTCGCGKSF 116
>sp|P51217|YCF83_PORPU Uncharacterized protein ycf83 OS=Porphyra purpurea GN=ycf83 PE=3 SV=1 Length = 114
Score = 131 bits (329), Expect = 3e-30 Identities = 58/106 (54%), Positives = 77/106 (72%) Frame = +2
Query: 194 ITLSTKALSHLNKMRTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXXXXXXEGF 373 ITL+ A + ++++ + ++CLR+GV+QGGCSGMSY+M+FE S+ + F Sbjct: 8 ITLTEPAARQIKILKSNFDNEVCLRIGVKQGGCSGMSYSMNFESVSSLRETDEVLMLDSF 67
Query: 374 TMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFA 511 + CDPKSLLYLYG+ LDYS LIGGGF FSNPNA+ TCGCGKSF+ Sbjct: 68 LVACDPKSLLYLYGLSLDYSSELIGGGFQFSNPNASQTCGCGKSFS 113
>sp|Q1XDR9|YCF83_PORYE Uncharacterized protein ycf83 OS=Porphyra yezoensis GN=ycf83 PE=3 SV=1 Length = 114
Score = 129 bits (323), Expect = 2e-29 Identities = 59/106 (55%), Positives = 75/106 (70%) Frame = +2
Query: 194 ITLSTKALSHLNKMRTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXXXXXXEGF 373 IT++ AL + ++ D D+ LR+GVRQGGCSGMSY+M+FE + F Sbjct: 8 ITITKPALKQIAILKNDHENDVHLRIGVRQGGCSGMSYSMNFEHVDKLKDTDERLRLDNF 67
Query: 374 TMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFA 511 ++VCDPKSLLYLYG+ LD+S LIGGGF FSNPNA+ TCGCGKSF+ Sbjct: 68 SVVCDPKSLLYLYGLSLDFSSELIGGGFQFSNPNASQTCGCGKSFS 113
>sp|Q9MSA1|YCF83_GALSU Uncharacterized protein ycf83 OS=Galdieria sulphuraria GN=ycf83 PE=3 SV=1 Length = 112
Score = 122 bits (305), Expect = 2e-27 Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 1/107 (0%) Frame = +2
Query: 194 ITLSTKALSHLNKMRTDLNQD-LCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXXXXXXEG 370 I ++ AL HLN + ++D L +R+G++QGGCSG+SY M +E++SN + Sbjct: 6 INITKSALDHLNSISKLNSEDKLYIRIGIKQGGCSGLSYFMTYEKKSNISDNDLVYDYDN 65
Query: 371 FTMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFA 511 FT+VCD KS+LYLYG+ LDYS SLI GGF F NPNA TCGCGKSF+ Sbjct: 66 FTLVCDNKSILYLYGISLDYSSSLIDGGFKFLNPNAKQTCGCGKSFS 112
>sp|Q1GXC7|ERPA_METFK Putative iron-sulfur cluster insertion protein erpA OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=erpA PE=3 SV=1 Length = 117
Score = 87.0 bits (214), Expect = 7e-17 Identities = 49/115 (42%), Positives = 61/115 (53%) Frame = +2
Query: 170 TEQSVKPAITLSTKALSHLNKMRTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXX 349 TE+ P I A + + + DL LRV V GGCSG Y FE+ N Sbjct: 5 TEEIPSPLIFTDNAARKVKELIDEEGSPDLKLRVFVSGGGCSGFQYGFTFEETINEDDTT 64
Query: 350 XXXXXEGFTMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFAA 514 +G T++ DP SL YL G ++DY DSL G F NPNAT+TCGCG SF+A Sbjct: 65 VDK--DGVTLLIDPMSLQYLVGAEIDYQDSLQGSQFVIRNPNATTTCGCGSSFSA 117
>sp|Q3BY98|ERPA_XANC5 Iron-sulfur cluster insertion protein erpA OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=erpA PE=3 SV=1 Length = 128
Score = 86.3 bits (212), Expect = 1e-16 Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Frame = +2
Query: 176 QSVKPAITLSTKALSHLNKM-RTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXX 352 QS+ + S A + + ++ + + N DL LRV ++ GGCSG Y +F++ N Sbjct: 17 QSIDRPLNFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDE--NRAEDDL 74
Query: 353 XXXXEGFTMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFA 511 +G T++ DP SL YL G ++DY++SL G F NPNA +TCGCG SF+ Sbjct: 75 AVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFS 127
>sp|Q8PQ32|ERPA_XANAC Iron-sulfur cluster insertion protein erpA OS=Xanthomonas axonopodis pv. citri GN=erpA PE=3 SV=1 Length = 128
Score = 86.3 bits (212), Expect = 1e-16 Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Frame = +2
Query: 176 QSVKPAITLSTKALSHLNKM-RTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXX 352 QS+ + S A + + ++ + + N DL LRV ++ GGCSG Y +F++ N Sbjct: 17 QSIDRPLNFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDE--NRAEDDL 74
Query: 353 XXXXEGFTMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFA 511 +G T++ DP SL YL G ++DY++SL G F NPNA +TCGCG SF+ Sbjct: 75 AVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFS 127
>sp|Q5H5J1|ERPA_XANOR Iron-sulfur cluster insertion protein erpA OS=Xanthomonas oryzae pv. oryzae GN=erpA PE=3 SV=2 Length = 128
Score = 85.5 bits (210), Expect = 2e-16 Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Frame = +2
Query: 176 QSVKPAITLSTKALSHLNKM-RTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXX 352 QS+ + S A + + ++ + + N DL LRV ++ GGCSG Y +F++ N Sbjct: 17 QSIDRPLHFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDE--NRAEDDL 74
Query: 353 XXXXEGFTMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFA 511 +G T++ DP SL YL G ++DY++SL G F NPNA +TCGCG SF+ Sbjct: 75 AVVTDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFS 127
>sp|Q2P884|ERPA_XANOM Iron-sulfur cluster insertion protein erpA OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=erpA PE=3 SV=1 Length = 128
Score = 85.5 bits (210), Expect = 2e-16 Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Frame = +2
Query: 176 QSVKPAITLSTKALSHLNKM-RTDLNQDLCLRVGVRQGGCSGMSYTMDFEQRSNXXXXXX 352 QS+ + S A + + ++ + + N DL LRV ++ GGCSG Y +F++ N Sbjct: 17 QSIDRPLHFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDE--NRAEDDL 74
Query: 353 XXXXEGFTMVCDPKSLLYLYGMQLDYSDSLIGGGFSFSNPNATSTCGCGKSFA 511 +G T++ DP SL YL G ++DY++SL G F NPNA +TCGCG SF+ Sbjct: 75 AVVTDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFS 127
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5VP48 |
Definition |
tr|Q5VP48|Q5VP48_ORYSJ Os06g0146400 protein OS=Oryza sativa subsp. japonica |
Align length |
118 |
Score (bit) |
174.0 |
E-value |
5.0e-42 |
Report |
|