DK951980 |
Clone id |
TST38A01NGRL0012_N18 |
Library |
TST38 |
Length |
547 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_N18. 5' end sequence. |
Accession |
DK951980 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL72Contig2 |
Sequence |
CTTCAGAGTCGACCAAAAGGCTCAGAAGGAAGCGAGTCCAGTGTTTGCAAGACATCTTAA TTCTCCTCCTTTGCCACTTAGCTCCATGGATTGCACATTTGCGGCGCAGGCCTCTCCGCA AACAGCTGCGGCTCCCCTAGCAGCCCTCTCACACAAGTCTTCTGTTCAGATCCCGCGGGG GGCTCTCCGCTCAAACTTCTGTGTGCAGACAGGTCTTTTAAAGTTGGATATTCAGAGAGG GATAAAGTCAAGGTTGAGGAGAAACAGGGGCAGTGTCAAGTTGGCAGTTGTTAGAGCAAG TGGTGATACTCAAGATAGTGGGTCTCCGATAGCTCCGTTCCAGCCAGAGTCTCCTACCGG TCAGTACTTGGCACAGCTTCTTCAAAGCCATCCCCATCTTGTTCCTGCTGCTGTTGAGCA AGAGCTTGAGAAGCTTGCTGAGAATCGTACTTTGCAGGATTCTTCCACTGAGCCTAGCTC AAAGGGTTCCGAGCTTGTCCTCTACAGACGGATTGCTGAGCTCAAAGAGCAGGAAAGGCA AAGAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5KJR1 |
Definition |
sp|Q5KJR1|IWS1_CRYNE Transcription factor IWS1 OS=Cryptococcus neoformans |
Align length |
42 |
Score (bit) |
31.2 |
E-value |
3.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPW2 |
Definition |
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
99 |
Score (bit) |
105.0 |
E-value |
1.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK951980|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_N18, 5' (547 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 105 1e-21 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 105 1e-21 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 98 2e-19 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 96 1e-18 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 96 1e-18 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 96 1e-18 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 95 2e-18 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 95 2e-18 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 95 2e-18 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 89 2e-16 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 87 7e-16 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 86 1e-15 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 86 1e-15 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 85 2e-15 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 84 5e-15 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 84 5e-15 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 84 5e-15 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 82 1e-14 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 82 1e-14 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 80 7e-14 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 78 3e-13 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 78 3e-13 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A5BZ18|A5BZ18_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 76 1e-12 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 73 1e-11 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 57 6e-07 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 57 6e-07 tr|B4FPS1|B4FPS1_MAIZE Putative uncharacterized protein OS=Zea m... 55 3e-06 tr|A8IKK2|A8IKK2_CHLRE Predicted protein OS=Chlamydomonas reinha... 55 3e-06
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 105 bits (263), Expect = 1e-21 Identities = 56/99 (56%), Positives = 70/99 (70%) Frame = +2
Query: 251 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 430 R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127
Query: 431 KLAENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRA 547 +L +R PSS +ELVLYRRIAE+K ER++A Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVKAAERRKA 166
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 105 bits (263), Expect = 1e-21 Identities = 55/95 (57%), Positives = 69/95 (72%), Gaps = 2/95 (2%) Frame = +2
Query: 269 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 442 G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63
Query: 443 NRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRA 547 +R ++ E S+ G+ELVLYRRIAE+K ER++A Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVKANERKKA 98
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 98.2 bits (243), Expect = 2e-19 Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 4/97 (4%) Frame = +2
Query: 269 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 436 GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118
Query: 437 AENRTLQDSSTEPSSKGSELVLYRRIAELKEQERQRA 547 +R + +PS+ G++LVLYRRIAE K +R++A Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAKANDRRKA 155
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 95.9 bits (237), Expect = 1e-18 Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 6/92 (6%) Frame = +2
Query: 287 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 451 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 452 LQDSSTEPSS-KGSELVLYRRIAELKEQERQR 544 Q + + +S G+++VLYRRIAELKE ER+R Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRR 164
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 95.9 bits (237), Expect = 1e-18 Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 6/92 (6%) Frame = +2
Query: 287 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 451 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 452 LQDSSTEPSS-KGSELVLYRRIAELKEQERQR 544 Q + + +S G+++VLYRRIAELKE ER+R Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRR 164
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 95.9 bits (237), Expect = 1e-18 Identities = 52/92 (56%), Positives = 68/92 (73%), Gaps = 6/92 (6%) Frame = +2
Query: 287 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 451 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 452 LQDSSTEPSS-KGSELVLYRRIAELKEQERQR 544 Q + + +S G+++VLYRRIAELKE ER+R Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENERRR 164
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 95.1 bits (235), Expect = 2e-18 Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 1/88 (1%) Frame = +2
Query: 287 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 466 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 467 TEPSS-KGSELVLYRRIAELKEQERQRA 547 + SS G+++VLYRRIAE+KE+ER+RA Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRA 156
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 95.1 bits (235), Expect = 2e-18 Identities = 50/88 (56%), Positives = 67/88 (76%), Gaps = 1/88 (1%) Frame = +2
Query: 287 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 466 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 467 TEPSS-KGSELVLYRRIAELKEQERQRA 547 + SS G+++VLYRRIAE+KE+ER+RA Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKERRRA 156
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 95.1 bits (235), Expect = 2e-18 Identities = 47/88 (53%), Positives = 65/88 (73%) Frame = +2
Query: 284 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 463 A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R + Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127
Query: 464 STEPSSKGSELVLYRRIAELKEQERQRA 547 EPS+ ++LVLYR+IAE+K ER++A Sbjct: 128 KEEPSATSTDLVLYRKIAEVKANERRKA 155
>tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022976001 PE=4 SV=1 Length = 342
Score = 88.6 bits (218), Expect = 2e-16 Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 4/91 (4%) Frame = +2
Query: 287 VVRASG----DTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTL 454 +VRAS D+ +S +PIAP + ESP G++L ++L SHPHLVPAAVE++LE+ +R Sbjct: 10 MVRASATVDNDSYESAAPIAPLRLESPIGRFLTEILISHPHLVPAAVERQLEQFQTDRDA 69
Query: 455 QDSSTEPSSKGSELVLYRRIAELKEQERQRA 547 + E S+ G EL+LYRRIA++K ER++A Sbjct: 70 EGHKQESSASGIELLLYRRIAKVKANERKKA 100
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