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NBDC - LSDB Archive
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DK951994
Clone id TST38A01NGRL0012_O09
Library
Length 568
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_O09. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAGTCAGGCCATCTTGCTCGTGATTGTCCTTCTGAGAGCGGTGGTGGTGGTAGACGTGGT
GGTGGCGGTGGAGGTTATGGCTCAGGTGGTGGCGGAGGTGGATATGGTGGTTCAAGAGGT
GGAGGCGGAGGTGGAGGTGGAGGTGGAAATGCTTGCTACACTTGTGGCAAATCTGGTCAC
TTCTCCCGGGACTGCCCAGAAGCAGTGTAGATGCGGATCTACCTGTGTTTCTCCCCTCAT
CATGTTGGTTTTGGTGGAAGCTTTTGCCTCCTGCTTTCAGACAAGATGAGACGGGTCACA
TCTCTTCTCCCCCAAAGCTTTGTTTTTCATTCTAGGGCTGCTATGTATGTCAGTTTTGCT
GTTCTTCTGCTGGTTGAAGCAGAGAGCTTTTTTTGGTTCTACATCTTCTATACACGTACA
CGTGCTTCTTCAGTTAGAGGGATCTTCATCAAGCTTGTTGCAGCTCTGGTAGGAGAGGTT
CCTACAAGTCTCACAGGTTTTGAGTGGGGAGATGCTGGCGATGGAGAAGCCTGCAATGCG
AATGCCTAATCTTTGCGGGTCTTCGTTG
■■Homology search results ■■ -
sp_hit_id P05895
Definition sp|P05895|POL_SIVVT Gag-Pol polyprotein OS=Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1)
Align length 31
Score (bit) 40.0
E-value 0.008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951994|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_O09, 5'
         (568 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P05895|POL_SIVVT Gag-Pol polyprotein OS=Simian immunodeficien...    40   0.008
sp|P27980|POL_SIVVG Gag-Pol polyprotein OS=Simian immunodeficien...    40   0.008
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania maj...    40   0.008
sp|P27978|GAG_SIVVG Gag polyprotein OS=Simian immunodeficiency v...    40   0.008
sp|P27973|POL_SIVV1 Gag-Pol polyprotein OS=Simian immunodeficien...    37   0.053
sp|P27972|GAG_SIVV1 Gag polyprotein OS=Simian immunodeficiency v...    37   0.053
sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing...    37   0.069
sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing...    37   0.069
sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Ratt...    37   0.090
sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Po...    37   0.090
sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein OS=Mu...    37   0.090
sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Ho...    37   0.090
sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein OS=Ga...    37   0.090
sp|Q3T0Q6|CNBP_BOVIN Cellular nucleic acid-binding protein OS=Bo...    37   0.090
sp|Q8WW36|ZCH13_HUMAN Zinc finger CCHC domain-containing protein...    36   0.15 
sp|Q38896|GRP2B_ARATH Glycine-rich protein 2b OS=Arabidopsis tha...    35   0.26 
sp|P53849|GIS2_YEAST Zinc finger protein GIS2 OS=Saccharomyces c...    34   0.45 
sp|Q9BDY9|RBM4_RABIT RNA-binding protein 4 OS=Oryctolagus cunicu...    33   0.76 
sp|Q8C7Q4|RBM4_MOUSE RNA-binding protein 4 OS=Mus musculus GN=Rb...    33   0.76 
sp|Q4R979|RBM4_MACFA RNA-binding protein 4 OS=Macaca fasciculari...    33   0.76 
sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RB...    33   0.76 
sp|Q3MHX3|RBM4_BOVIN RNA-binding protein 4 OS=Bos taurus GN=RBM4...    33   0.76 
sp|Q64LC9|RBM4B_RAT RNA-binding protein 4B OS=Rattus norvegicus ...    33   0.76 
sp|Q06AT9|RBM4B_PIG RNA-binding protein 4B OS=Sus scrofa GN=RBM4...    33   0.76 
sp|Q8VE92|RBM4B_MOUSE RNA-binding protein 4B OS=Mus musculus GN=...    33   0.76 
sp|Q9BQ04|RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=...    33   0.76 
sp|P19560|POL_BIV29 Gag-Pol polyprotein OS=Bovine immunodeficien...    33   0.76 
sp|Q94901|LARK_DROME RNA-binding protein lark OS=Drosophila mela...    33   0.76 
sp|P27484|GRP2_NICSY Glycine-rich protein 2 OS=Nicotiana sylvest...    33   0.76 
sp|P19558|GAG_BIV29 Gag polyprotein OS=Bovine immunodeficiency v...    33   0.76 

>sp|P05895|POL_SIVVT Gag-Pol polyprotein OS=Simian immunodeficiency
           virus agm.vervet (isolate AGM TYO-1) GN=gag-pol PE=3
           SV=2
          Length = 1467

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CGK GH  R CPE   MR   C  P H+
Sbjct: 404 CYNCGKFGHMQRQCPEPRKMRCLKCGKPGHL 434


>sp|P27980|POL_SIVVG Gag-Pol polyprotein OS=Simian immunodeficiency
           virus agm.vervet (isolate AGM3) GN=gag-pol PE=3 SV=2
          Length = 1465

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CGK GH  R CPE   MR   C  P H+
Sbjct: 404 CYNCGKFGHMQRQCPEPRKMRCLKCGKPGHL 434


>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major
           GN=HEXBP PE=4 SV=1
          Length = 271

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           ESGH++R+CPS                                       ACY CGK GH
Sbjct: 203 ESGHMSRECPSAGSTGSGD------------------------------RACYKCGKPGH 232

Query: 181 FSRDCPEA 204
            SR+CPEA
Sbjct: 233 ISRECPEA 240



 Score = 39.3 bits (90), Expect = 0.014
 Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           ++GH++RDCP+                                        CY CG+SGH
Sbjct: 147 DAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGH 206

Query: 181 FSRDCPEA-----V*MRIYLCFSPHHVG-----FGGSF 264
            SR+CP A          Y C  P H+       GGS+
Sbjct: 207 MSRECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSY 244



 Score = 35.0 bits (79), Expect = 0.26
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           + GHL+RDCPS                                        CY CG +GH
Sbjct: 104 QEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGD-------------RTCYKCGDAGH 150

Query: 181 FSRDCP 198
            SRDCP
Sbjct: 151 ISRDCP 156



 Score = 34.7 bits (78), Expect = 0.34
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 151 ACYTCGKSGHFSRDCPEA 204
           +C  CGK GH++R+CPEA
Sbjct: 17  SCRNCGKEGHYARECPEA 34



 Score = 34.7 bits (78), Expect = 0.34
 Identities = 18/68 (26%), Positives = 24/68 (35%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E+GH++RDCP+                                        CY CG+ GH
Sbjct: 77  EAGHMSRDCPNSAKPGAAKGFE-----------------------------CYKCGQEGH 107

Query: 181 FSRDCPEA 204
            SRDCP +
Sbjct: 108 LSRDCPSS 115



 Score = 33.9 bits (76), Expect = 0.58
 Identities = 17/68 (25%), Positives = 25/68 (36%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E GH++R+CP+E                                       C+ CG++GH
Sbjct: 50  EEGHMSRECPNEARSGAAGAM-----------------------------TCFRCGEAGH 80

Query: 181 FSRDCPEA 204
            SRDCP +
Sbjct: 81  MSRDCPNS 88



 Score = 30.8 bits (68), Expect = 4.9
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCP 198
           C+ CG+ GH SR+CP
Sbjct: 45  CFRCGEEGHMSRECP 59


>sp|P27978|GAG_SIVVG Gag polyprotein OS=Simian immunodeficiency
           virus agm.vervet (isolate AGM3) GN=gag PE=3 SV=1
          Length = 521

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CGK GH  R CPE   MR   C  P H+
Sbjct: 404 CYNCGKFGHMQRQCPEPRKMRCLKCGKPGHL 434


>sp|P27973|POL_SIVV1 Gag-Pol polyprotein OS=Simian immunodeficiency
           virus agm.vervet (isolate AGM155) GN=gag-pol PE=3 SV=2
          Length = 1470

 Score = 37.4 bits (85), Expect = 0.053
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CGK GH  R CPE   ++   C  P H+
Sbjct: 400 CYNCGKFGHMQRQCPEPRKIKCLKCGKPGHL 430


>sp|P27972|GAG_SIVV1 Gag polyprotein OS=Simian immunodeficiency
           virus agm.vervet (isolate AGM155) GN=gag PE=3 SV=1
          Length = 520

 Score = 37.4 bits (85), Expect = 0.053
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CGK GH  R CPE   ++   C  P H+
Sbjct: 400 CYNCGKFGHMQRQCPEPRKIKCLKCGKPGHL 430


>sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing
            virus (isolate Hohn) PE=3 SV=1
          Length = 2180

 Score = 37.0 bits (84), Expect = 0.069
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +1

Query: 151  ACYTCGKSGHFSRDCPE 201
            +C+TCGK GHFSR+CP+
Sbjct: 1112 SCFTCGKIGHFSRNCPQ 1128


>sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing
            virus (isolate Shepherd) PE=3 SV=1
          Length = 2179

 Score = 37.0 bits (84), Expect = 0.069
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +1

Query: 151  ACYTCGKSGHFSRDCPE 201
            +C+TCGK GHFSR+CP+
Sbjct: 1111 SCFTCGKIGHFSRNCPQ 1127


>sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Rattus
           norvegicus GN=Cnbp PE=2 SV=1
          Length = 177

 Score = 36.6 bits (83), Expect = 0.090
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CGK GH +RDC  A   + Y C    H+
Sbjct: 98  CYNCGKPGHLARDCDHADEQKCYSCGEFGHI 128



 Score = 35.0 bits (79), Expect = 0.26
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +1

Query: 148 NACYTCGKSGHFSRDCPEAV*MR---IYLCFSPHHV 246
           +ACY CG+ GH ++DC E    R    Y C  P H+
Sbjct: 72  DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHL 107



 Score = 33.9 bits (76), Expect = 0.58
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +1

Query: 148 NACYTCGKSGHFSRDCP 198
           N C+ CG+SGH++R+CP
Sbjct: 4   NECFKCGRSGHWARECP 20



 Score = 32.0 bits (71), Expect = 2.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHVGFGGS 261
           CY+CG+ GH  +DC +   ++ Y C    HV    S
Sbjct: 119 CYSCGEFGHIQKDCTK---VKCYRCGETGHVAINCS 151



 Score = 30.4 bits (67), Expect = 6.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDC 195
           CY CG+SGH ++DC
Sbjct: 54  CYRCGESGHLAKDC 67



 Score = 30.0 bits (66), Expect = 8.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDC 195
           CY CG+SGH +R+C
Sbjct: 158 CYRCGESGHLAREC 171


>sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Pongo
           abelii GN=CNBP PE=2 SV=1
          Length = 177

 Score = 36.6 bits (83), Expect = 0.090
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CGK GH +RDC  A   + Y C    H+
Sbjct: 98  CYNCGKPGHLARDCDHADEQKCYSCGEFGHI 128



 Score = 35.0 bits (79), Expect = 0.26
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +1

Query: 148 NACYTCGKSGHFSRDCPEAV*MR---IYLCFSPHHV 246
           +ACY CG+ GH ++DC E    R    Y C  P H+
Sbjct: 72  DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHL 107



 Score = 33.9 bits (76), Expect = 0.58
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +1

Query: 148 NACYTCGKSGHFSRDCP 198
           N C+ CG+SGH++R+CP
Sbjct: 4   NECFKCGRSGHWARECP 20



 Score = 32.0 bits (71), Expect = 2.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHVGFGGS 261
           CY+CG+ GH  +DC +   ++ Y C    HV    S
Sbjct: 119 CYSCGEFGHIQKDCTK---VKCYRCGETGHVAINCS 151



 Score = 30.4 bits (67), Expect = 6.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDC 195
           CY CG+SGH ++DC
Sbjct: 54  CYRCGESGHLAKDC 67



 Score = 30.0 bits (66), Expect = 8.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDC 195
           CY CG+SGH +R+C
Sbjct: 158 CYRCGESGHLAREC 171
tr_hit_id A9RU85
Definition tr|A9RU85|A9RU85_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 31
Score (bit) 41.2
E-value 0.041
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK951994|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0012_O09, 5'
         (568 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RU85|A9RU85_PHYPA Predicted protein (Fragment) OS=Physcomit...    41   0.041
tr|A4HP28|A4HP28_LEIBR Universal minicircle sequence binding pro...    41   0.041
tr|Q4Q1R0|Q4Q1R0_LEIMA Universal minicircle sequence binding pro...    40   0.090
tr|O46363|O46363_CRIFA Universal minicircle sequence binding pro...    40   0.090
tr|A4HP22|A4HP22_LEIBR Universal minicircle sequence binding pro...    40   0.090
tr|A4HP21|A4HP21_LEIBR Universal minicircle sequence binding pro...    40   0.090
tr|Q5KGW6|Q5KGW6_CRYNE DNA-binding protein hexbp, putative (Puta...    40   0.090
tr|Q4Q1R4|Q4Q1R4_LEIMA Universal minicircle sequence binding pro...    40   0.12 
tr|Q4Q1R3|Q4Q1R3_LEIMA Universal minicircle sequence binding pro...    40   0.12 
tr|Q3L234|Q3L234_BOMMO Zinc finger protein OS=Bombyx mori PE=2 SV=1    40   0.12 
tr|Q23698|Q23698_CRIFA UMS binding protein OS=Crithidia fascicul...    40   0.12 
tr|A4IDD2|A4IDD2_LEIIN Universal minicircle sequence binding pro...    40   0.12 
tr|A4IDD1|A4IDD1_LEIIN Universal minicircle sequence binding pro...    40   0.12 
tr|Q7S753|Q7S753_NEUCR Putative uncharacterized protein OS=Neuro...    40   0.12 
tr|A4IDD5|A4IDD5_LEIIN Universal minicircle sequence binding pro...    39   0.15 
tr|Q6F3B9|Q6F3B9_ORYSJ Os03g0786500 protein OS=Oryza sativa subs...    39   0.20 
tr|B8AKX7|B8AKX7_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.20 
tr|Q871K8|Q871K8_NEUCR Putative uncharacterized protein 20H10.10...    39   0.20 
tr|Q5B2W9|Q5B2W9_EMENI Putative uncharacterized protein OS=Emeri...    39   0.20 
tr|B0EHG9|B0EHG9_ENTDI Cellular nucleic acid binding protein, pu...    39   0.26 
tr|A7SJG4|A7SJG4_NEMVE Predicted protein (Fragment) OS=Nematoste...    39   0.26 
tr|A4ZIS5|A4ZIS5_9ASCI Vasa protein OS=Botrylloides violaceus PE...    39   0.26 
tr|Q4R1V0|Q4R1V0_9CRUS VASA RNA helicase OS=Daphnia magna GN=vas...    38   0.45 
tr|Q9C1E7|Q9C1E7_SCHCO Putative DNA binding protein (Fragment) O...    38   0.45 
tr|Q752C9|Q752C9_ASHGO AFR646Wp OS=Ashbya gossypii GN=AFR646W PE...    38   0.45 
tr|Q2GYH5|Q2GYH5_CHAGB Putative uncharacterized protein OS=Chaet...    38   0.45 
tr|B5DH11|B5DH11_SALSA Zinc finger protein 9-2 OS=Salmo salar PE...    37   0.59 
tr|B5DH10|B5DH10_SALSA Zinc finger protein 9-1 OS=Salmo salar PE...    37   0.59 
tr|A6YPD8|A6YPD8_TRIIF E3 ubiquitin ligase OS=Triatoma infestans...    37   0.59 
tr|A9SBU8|A9SBU8_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.77 

>tr|A9RU85|A9RU85_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_27641 PE=4 SV=1
          Length = 106

 Score = 41.2 bits (95), Expect = 0.041
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CG  GHFS DCPEA  +R Y+C    H+
Sbjct: 25  CYVCGNFGHFSYDCPEA--LRCYICKRTGHM 53


>tr|A4HP28|A4HP28_LEIBR Universal minicircle sequence binding
           protein (UMSBP), putative OS=Leishmania braziliensis
           GN=LbrM35_V2.1830 PE=4 SV=1
          Length = 276

 Score = 41.2 bits (95), Expect = 0.041
 Identities = 19/68 (27%), Positives = 25/68 (36%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           ++GH++RDCP+                                        CY CGK GH
Sbjct: 147 DAGHISRDCPNSQGGYSGAGDRTCYKCGESGHISRDCPNSQGGYSGAGDRTCYKCGKPGH 206

Query: 181 FSRDCPEA 204
            SR+CPEA
Sbjct: 207 MSRECPEA 214



 Score = 38.1 bits (87), Expect = 0.34
 Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNA---CYTCGK 171
           ESGH++RDCP+                                           CY CGK
Sbjct: 175 ESGHISRDCPNSQGGYSGAGDRTCYKCGKPGHMSRECPEAGGSYGGSRGGGDRTCYKCGK 234

Query: 172 SGHFSRDCPEA 204
            GH SR+CPEA
Sbjct: 235 PGHMSRECPEA 245



 Score = 35.8 bits (81), Expect = 1.7
 Identities = 18/68 (26%), Positives = 27/68 (39%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E+GH++R+CP+E                                      AC+ CG++GH
Sbjct: 50  EAGHMSRECPNEAKSGAAGAM-----------------------------ACFRCGEAGH 80

Query: 181 FSRDCPEA 204
            SRDCP +
Sbjct: 81  MSRDCPNS 88



 Score = 35.4 bits (80), Expect = 2.2
 Identities = 19/68 (27%), Positives = 23/68 (33%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           + GHL+RDCPS                                        CY CG +GH
Sbjct: 104 QEGHLSRDCPSSQGGGRGGYGQKRGRNGAQGGYGGD-------------RTCYKCGDAGH 150

Query: 181 FSRDCPEA 204
            SRDCP +
Sbjct: 151 ISRDCPNS 158



 Score = 35.0 bits (79), Expect = 2.9
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEA 204
           CY CG SGH SRDCP +
Sbjct: 260 CYKCGDSGHISRDCPSS 276



 Score = 34.3 bits (77), Expect = 5.0
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEA 204
           C  CGK GH++R+CPEA
Sbjct: 18  CRNCGKEGHYARECPEA 34


>tr|Q4Q1R0|Q4Q1R0_LEIMA Universal minicircle sequence binding
           protein (UMSBP), putative OS=Leishmania major
           GN=LmjF36.1640 PE=4 SV=1
          Length = 271

 Score = 40.0 bits (92), Expect = 0.090
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           ESGH++R+CPS                                       ACY CGK GH
Sbjct: 203 ESGHMSRECPSAGSTGSSD------------------------------RACYKCGKPGH 232

Query: 181 FSRDCPEA 204
            SR+CPEA
Sbjct: 233 ISRECPEA 240



 Score = 39.7 bits (91), Expect = 0.12
 Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 10/98 (10%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           ++GH++RDCP+                                        CY CG+SGH
Sbjct: 147 DAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGH 206

Query: 181 FSRDCPEA-----V*MRIYLCFSPHHVG-----FGGSF 264
            SR+CP A          Y C  P H+       GGS+
Sbjct: 207 MSRECPSAGSTGSSDRACYKCGKPGHISRECPEAGGSY 244



 Score = 35.0 bits (79), Expect = 2.9
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           + GHL+RDCPS                                        CY CG +GH
Sbjct: 104 QEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGD-------------RTCYKCGDAGH 150

Query: 181 FSRDCP 198
            SRDCP
Sbjct: 151 ISRDCP 156



 Score = 34.7 bits (78), Expect = 3.8
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 151 ACYTCGKSGHFSRDCPEA 204
           +C  CGK GH++R+CPEA
Sbjct: 17  SCRNCGKEGHYARECPEA 34



 Score = 34.7 bits (78), Expect = 3.8
 Identities = 18/68 (26%), Positives = 24/68 (35%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E+GH++RDCP+                                        CY CG+ GH
Sbjct: 77  EAGHMSRDCPNSAKPGAAKGFE-----------------------------CYKCGQEGH 107

Query: 181 FSRDCPEA 204
            SRDCP +
Sbjct: 108 LSRDCPSS 115


>tr|O46363|O46363_CRIFA Universal minicircle sequence binding
           protein OS=Crithidia fasciculata GN=UMSBP2 PE=4 SV=1
          Length = 116

 Score = 40.0 bits (92), Expect = 0.090
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           ++GHL+R+CPSE                                       CY CG+SGH
Sbjct: 34  QTGHLSRECPSERKPKACYNCGSTEHLSRECPNEAKTGADS--------RTCYNCGQSGH 85

Query: 181 FSRDCP-EAV*MRIYLCFSPHHV 246
            SRDCP E      Y C S  H+
Sbjct: 86  LSRDCPSERKPKACYNCGSTEHL 108



 Score = 37.0 bits (84), Expect = 0.77
 Identities = 20/67 (29%), Positives = 25/67 (37%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           +SGHL+RDCPSE                                      ACY CG + H
Sbjct: 82  QSGHLSRDCPSERKP----------------------------------KACYNCGSTEH 107

Query: 181 FSRDCPE 201
            SR+CP+
Sbjct: 108 LSRECPD 114



 Score = 35.8 bits (81), Expect = 1.7
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MR-IYLCFSPHHV 246
           CY CG++GH SR+CP+A   R  Y C    H+
Sbjct: 7   CYKCGEAGHMSRECPKAAASRTCYNCGQTGHL 38



 Score = 35.0 bits (79), Expect = 2.9
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCP-EAV*MRIYLCFSPHHV 246
           CY CG++GH SR+CP E      Y C S  H+
Sbjct: 29  CYNCGQTGHLSRECPSERKPKACYNCGSTEHL 60


>tr|A4HP22|A4HP22_LEIBR Universal minicircle sequence binding
           protein OS=Leishmania braziliensis GN=LbrM35_V2.1770
           PE=4 SV=1
          Length = 115

 Score = 40.0 bits (92), Expect = 0.090
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E+GH++RDCPSE                                      +CY CG +GH
Sbjct: 33  ETGHMSRDCPSERKPKSCFNCGSTEHLSRECTNEAKAGADT--------RSCYNCGGTGH 84

Query: 181 FSRDCP-EAV*MRIYLCFSPHHV 246
            SRDCP E      Y C S  H+
Sbjct: 85  MSRDCPNERKPKSCYNCGSTEHL 107



 Score = 35.4 bits (80), Expect = 2.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 151 ACYTCGKSGHFSRDCP-EAV*MRIYLCFSPHHV 246
           +CY CG++GH SRDCP E      + C S  H+
Sbjct: 27  SCYNCGETGHMSRDCPSERKPKSCFNCGSTEHL 59


>tr|A4HP21|A4HP21_LEIBR Universal minicircle sequence binding
           protein,putative OS=Leishmania braziliensis
           GN=LbrM35_V2.1760 PE=4 SV=1
          Length = 115

 Score = 40.0 bits (92), Expect = 0.090
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E+GH++RDCPSE                                      +CY CG +GH
Sbjct: 33  ETGHMSRDCPSERKPKSCFNCGSTEHLSRECTNEAKAGADT--------RSCYNCGGTGH 84

Query: 181 FSRDCP-EAV*MRIYLCFSPHHV 246
            SRDCP E      Y C S  H+
Sbjct: 85  LSRDCPNERKPKSCYNCGSTEHL 107



 Score = 35.4 bits (80), Expect = 2.2
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 151 ACYTCGKSGHFSRDCP-EAV*MRIYLCFSPHHV 246
           +CY CG++GH SRDCP E      + C S  H+
Sbjct: 27  SCYNCGETGHMSRDCPSERKPKSCFNCGSTEHL 59


>tr|Q5KGW6|Q5KGW6_CRYNE DNA-binding protein hexbp, putative
           (Putative uncharacterized protein) OS=Cryptococcus
           neoformans GN=CNBE2080 PE=4 SV=1
          Length = 204

 Score = 40.0 bits (92), Expect = 0.090
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY CG+ GH SR+CP+      Y C  P H+
Sbjct: 160 CYNCGQDGHISRECPQEQGKTCYSCGQPGHI 190



 Score = 38.1 bits (87), Expect = 0.34
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV-----------GFGGS 261
           CY CG SGH SR+CP+      Y C    H+           GFGG+
Sbjct: 30  CYNCGLSGHLSRECPQPKNKACYTCGQEGHLSSACPQGSGAGGFGGA 76


>tr|Q4Q1R4|Q4Q1R4_LEIMA Universal minicircle sequence binding
           protein, putative OS=Leishmania major GN=LmjF36.1610
           PE=4 SV=1
          Length = 115

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E+GH++RDCPSE                                      +CY CG +GH
Sbjct: 33  ETGHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADT--------RSCYNCGGTGH 84

Query: 181 FSRDCP-EAV*MRIYLCFSPHHV 246
            SRDCP E      Y C S  H+
Sbjct: 85  LSRDCPNERKPKSCYNCGSTDHL 107



 Score = 36.6 bits (83), Expect = 1.00
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 151 ACYTCGKSGHFSRDCP-EAV*MRIYLCFSPHHV 246
           +CY CG++GH SRDCP E      Y C S  H+
Sbjct: 27  SCYNCGETGHMSRDCPSERKPKSCYNCGSTDHL 59



 Score = 34.7 bits (78), Expect = 3.8
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MR-IYLCFSPHHV 246
           CY CG++GH SR CP A   R  Y C    H+
Sbjct: 6   CYKCGEAGHMSRSCPRAAATRSCYNCGETGHM 37


>tr|Q4Q1R3|Q4Q1R3_LEIMA Universal minicircle sequence binding
           protein OS=Leishmania major GN=LmjF36.1620 PE=4 SV=1
          Length = 175

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   ESGHLARDCPSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNACYTCGKSGH 180
           E+GH++RDCPSE                                      +CY CG +GH
Sbjct: 93  ETGHMSRDCPSERKPKSCYNCGSTDHLSRECTNEAKAGADT--------RSCYNCGGTGH 144

Query: 181 FSRDCP-EAV*MRIYLCFSPHHV 246
            SRDCP E      Y C S  H+
Sbjct: 145 LSRDCPNERKPKSCYNCGSTDHL 167



 Score = 36.6 bits (83), Expect = 1.00
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 151 ACYTCGKSGHFSRDCP-EAV*MRIYLCFSPHHV 246
           +CY CG++GH SRDCP E      Y C S  H+
Sbjct: 87  SCYNCGETGHMSRDCPSERKPKSCYNCGSTDHL 119



 Score = 34.7 bits (78), Expect = 3.8
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MR-IYLCFSPHHV 246
           CY CG++GH SR CP A   R  Y C    H+
Sbjct: 66  CYKCGEAGHMSRSCPRAAATRSCYNCGETGHM 97


>tr|Q3L234|Q3L234_BOMMO Zinc finger protein OS=Bombyx mori PE=2 SV=1
          Length = 143

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           CY C KSGH SR+CP+      Y+C  P H+
Sbjct: 105 CYNCNKSGHISRNCPDGT-KTCYVCGKPGHI 134



 Score = 34.3 bits (77), Expect = 5.0
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEA 204
           CY CGK GH SR+C EA
Sbjct: 125 CYVCGKPGHISRECDEA 141



 Score = 33.5 bits (75), Expect = 8.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 154 CYTCGKSGHFSRDCPEAV*MRIYLCFSPHHV 246
           C+ C ++GHF+RDC E    R Y C    H+
Sbjct: 38  CFKCNRTGHFARDCKEEA-DRCYRCNGTGHI 67