DK952009 |
Clone id |
TST38A01NGRL0012_P01 |
Library |
TST38 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_P01. 5' end sequence. |
Accession |
DK952009 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL117Contig1 |
Sequence |
GAGTCATCTGTGCTTTGTGGTGAAGAAGCGGACATCAGCGAGTGCAGGAGCGCTGCAGCT ATGGCGGCCCAGCAGATGAGCAAGAAGCGCAAGTTTGTGGCAGATGGCGTTTTTTTTGCC GAGTTGAACGAAGTTCTCACGCGAGAGCTTGCTGAAGATGGGTACTCTGGCGTAGAGGTC CGGGTTACACCCATGCGAACTGAAATCATTATTCGTGCAACAAGGACCCAGAATGTGCTT GGGGATAAGGGGAGAAGAATCAGAGAGTTAACATCTTTGGTTCAGAAGAGGTTTAACTTT CCTGAAGGCACCGTTGAATTGTATGCTGAGAAAGTTAACAATCGGGGTCTTTGTGCTATT GCACAAGCAGAGTCACTCCGTTACAAGCTTCTTGGAGGGCTTGCTGTCAGAAGGGCTTGC TATGGTGTCCTAAGGTTTGTCATGGAGAGTGGCGCGAAGGGTTGTGAGGTCATTGTGAGT GGTAAGCTGAGAGCCCAGCGAGCGAAGTCGATGAAGTTCAAAGATGGGTATATGATTTCC TCTGGGCATCCTGTGAACTTGTACATTGACTCTGCAGTTCGCCACGTGCTTTTGAGACAG GGAGTCTTGGGCATCAAGGTCAAGATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M339 |
Definition |
sp|Q9M339|RS32_ARATH 40S ribosomal protein S3-2 OS=Arabidopsis thaliana |
Align length |
179 |
Score (bit) |
324.0 |
E-value |
2.0e-88 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FHH2 |
Definition |
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
179 |
Score (bit) |
342.0 |
E-value |
8.0e-93 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952009|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_P01, 5' (627 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea m... 342 8e-93 tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea... 338 1e-91 tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea... 338 2e-91 tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains ... 338 2e-91 tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subs... 338 2e-91 tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza... 338 2e-91 tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome ... 333 4e-90 tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella paten... 333 7e-90 tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella paten... 333 7e-90 tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genom... 331 2e-89 tr|Q2VCJ9|Q2VCJ9_SOLTU Putative uncharacterized protein OS=Solan... 330 4e-89 tr|A9PHW0|A9PHW0_POPTR Putative uncharacterized protein OS=Popul... 330 6e-89 tr|A9PAW1|A9PAW1_POPTR Putative uncharacterized protein OS=Popul... 330 6e-89 tr|B3TLR8|B3TLR8_ELAGV Ribosomal protein OS=Elaeis guineensis va... 329 7e-89 tr|Q75G91|Q75G91_ORYSJ Os03g0577000 protein OS=Oryza sativa subs... 328 1e-88 tr|B7FH64|B7FH64_MEDTR Putative uncharacterized protein OS=Medic... 328 1e-88 tr|A9PBQ6|A9PBQ6_POPTR Putative uncharacterized protein OS=Popul... 328 1e-88 tr|A2XIT7|A2XIT7_ORYSI Putative uncharacterized protein OS=Oryza... 328 1e-88 tr|B6TB97|B6TB97_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 327 3e-88 tr|B7FGM5|B7FGM5_MEDTR Putative uncharacterized protein OS=Medic... 327 4e-88 tr|B6TM40|B6TM40_MAIZE 40S ribosomal protein S3 OS=Zea mays PE=2... 327 4e-88 tr|Q1WLZ2|Q1WLZ2_CHLIN 40S ribosomal protein S3 OS=Chlamydomonas... 324 2e-87 tr|Q8L804|Q8L804_WHEAT Putative 40S ribosomal protein S3 OS=Trit... 323 4e-87 tr|A8I4P5|A8I4P5_CHLRE Ribosomal protein S3 OS=Chlamydomonas rei... 320 6e-86 tr|Q1XGD5|Q1XGD5_LAMJA Ribosomal protein S3 (Fragment) OS=Lampet... 310 3e-83 tr|Q9D0A2|Q9D0A2_MOUSE Putative uncharacterized protein OS=Mus m... 310 6e-83 tr|Q7ZYT3|Q7ZYT3_XENLA Ribosomal protein S1a protein OS=Xenopus ... 308 2e-82 tr|Q6P8G2|Q6P8G2_XENTR Ribosomal protein S3 OS=Xenopus tropicali... 308 2e-82 tr|Q5ZJC1|Q5ZJC1_CHICK Putative uncharacterized protein OS=Gallu... 308 2e-82 tr|B5FZR3|B5FZR3_TAEGU Putative ribosomal protein S3 OS=Taeniopy... 308 2e-82
>tr|B4FHH2|B4FHH2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 342 bits (878), Expect = 8e-93 Identities = 175/179 (97%), Positives = 178/179 (99%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRFNFPEG VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 190
>tr|A9NTN5|A9NTN5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 338 bits (868), Expect = 1e-91 Identities = 173/179 (96%), Positives = 176/179 (98%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQGVLGIKVKI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQGVLGIKVKI 188
>tr|A9NR91|A9NR91_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 233
Score = 338 bits (867), Expect = 2e-91 Identities = 173/179 (96%), Positives = 176/179 (98%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQGVLGIKVKI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQGVLGIKVKI 188
>tr|Q94LL1|Q94LL1_ORYSA Putative 40S ribosomal protein; contains C-terminal domain OS=Oryza sativa GN=OSJNBb0024A20.19 PE=3 SV=1 Length = 233
Score = 338 bits (866), Expect = 2e-91 Identities = 173/179 (96%), Positives = 177/179 (98%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGIKVKI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKI 190
>tr|Q6YTY2|Q6YTY2_ORYSJ Os07g0608500 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0018L13.2 PE=2 SV=1 Length = 233
Score = 338 bits (866), Expect = 2e-91 Identities = 173/179 (96%), Positives = 177/179 (98%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGIKVKI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKI 190
>tr|A2YNK7|A2YNK7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26820 PE=3 SV=1 Length = 233
Score = 338 bits (866), Expect = 2e-91 Identities = 173/179 (96%), Positives = 177/179 (98%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 12 KFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 71
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRFNFPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 72 TSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 131
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG+PVNLYIDSAVRHVLLRQGVLGIKVKI Sbjct: 132 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKI 190
>tr|A7P6K3|A7P6K3_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034104001 PE=3 SV=1 Length = 234
Score = 333 bits (855), Expect = 4e-90 Identities = 172/179 (96%), Positives = 174/179 (97%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRF FPE TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES Sbjct: 70 TSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 129
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLRQGVLGIKVKI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKI 188
>tr|A9RVF7|A9RVF7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162268 PE=3 SV=1 Length = 230
Score = 333 bits (853), Expect = 7e-90 Identities = 170/179 (94%), Positives = 175/179 (97%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LRQGVLGIKVKI Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKI 188
>tr|A9RUL6|A9RUL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166897 PE=3 SV=1 Length = 231
Score = 333 bits (853), Expect = 7e-90 Identities = 170/179 (94%), Positives = 175/179 (97%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRF FPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN YIDSAVRHV+LRQGVLGIKVKI Sbjct: 130 GAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKI 188
>tr|A7PDZ8|A7PDZ8_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016476001 PE=3 SV=1 Length = 234
Score = 331 bits (849), Expect = 2e-89 Identities = 169/179 (94%), Positives = 174/179 (97%) Frame = +1
Query: 91 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGDKGRRIREL 270 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG+KGRRIREL Sbjct: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
Query: 271 TSLVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMES 450 TS+VQKRF FPE +VELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACYGVLRF+MES Sbjct: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
Query: 451 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKI 627 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PV YIDSAVRHVLLRQGVLGIKVKI Sbjct: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKI 188
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