DK952015 |
Clone id |
TST38A01NGRL0012_P07 |
Library |
TST38 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_P07. 5' end sequence. |
Accession |
DK952015 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL1512Contig1 |
Sequence |
CATTGATTGTAGGAAATGCCTCATAGGGGCAGTATCGAGAAGATTTATACCGATACATCA TAAGATCATTTCTTCTCAGCCCAAGCAAATAATTCACACTCATAGGCGAGTCATAGCCTA CAATACCAACGTTCACTTTGATGAAGTTGAGCTGCTCGGCAGAATGTTGATGTGTGTGCT CTTCACCAACACGGCGGGAAATATTCTTCTGGAGCGTTTTCAGGGCGTTCAAGCTGAGGA ACGCTTGCATTGGAGGTCTTTTCTAGTGAAACTTGGAACGGATAACCTCAGTGGGGCACA CAACGAGGAGCTCTTTGTTGCCTCTCATAAGTCCGTGTATGTCGTTTATACCGCAATTGG AGATGTTTCTATATTCGTGGTTGGCAAGGATGAGTATGATGAACTGGCCTTGGCAGAAGT GCTGTATGTGATAACGTCATCAGTCAAGGATGTGTGCAAGAAAGCTCCCACTGAACGAGT ATTTTTGGAGAAGTATGGGAAAGTGTGCCTGTGTCTTGATGAGATAGTTTTTCAGGGGAC ATTAGAGCATACAGACAAAGATCGCATTCGACGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5NA06 |
Definition |
sp|Q5NA06|COPZ3_ORYSJ Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica |
Align length |
87 |
Score (bit) |
52.0 |
E-value |
2.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QIQ0 |
Definition |
tr|A7QIQ0|A7QIQ0_VITVI Chromosome chr9 scaffold_104, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
137 |
Score (bit) |
221.0 |
E-value |
2.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952015|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_P07, 5' (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QIQ0|A7QIQ0_VITVI Chromosome chr9 scaffold_104, whole genom... 221 2e-56 tr|Q9XI32|Q9XI32_ARATH F9L1.32 protein (Putative uncharacterized... 220 4e-56 tr|A9P8V7|A9P8V7_POPTR Putative uncharacterized protein OS=Popul... 220 4e-56 tr|Q75IP8|Q75IP8_ORYSJ Putative chloroplastic RNA-binding protei... 217 3e-55 tr|B8ANR6|B8ANR6_ORYSI Putative uncharacterized protein OS=Oryza... 216 5e-55 tr|A9RE27|A9RE27_PHYPA Predicted protein OS=Physcomitrella paten... 215 2e-54 tr|B4FEL3|B4FEL3_MAIZE Putative uncharacterized protein OS=Zea m... 213 5e-54 tr|Q2HUA7|Q2HUA7_MEDTR Longin-like OS=Medicago truncatula GN=Mtr... 212 1e-53 tr|Q700A4|Q700A4_CICAR Putative uncharacterized protein (Fragmen... 204 3e-51 tr|A2XP92|A2XP92_ORYSI Putative uncharacterized protein OS=Oryza... 130 5e-29 tr|A8JHN4|A8JHN4_CHLRE Zeta2-COP OS=Chlamydomonas reinhardtii GN... 86 1e-15 tr|B8AC44|B8AC44_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|A2ZZE3|A2ZZE3_ORYSJ Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|Q9MAY9|Q9MAY9_MAIZE Nonclathrin coat protein zeta1-COP OS=Zea... 51 5e-05 tr|B8A3E5|B8A3E5_MAIZE Putative uncharacterized protein OS=Zea m... 51 5e-05 tr|B6T9P5|B6T9P5_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 51 5e-05 tr|B8AZ04|B8AZ04_ORYSI Putative uncharacterized protein OS=Oryza... 50 7e-05 tr|B7E3G5|B7E3G5_ORYSJ cDNA clone:001-023-H02, full insert seque... 50 7e-05 tr|B6T570|B6T570_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 50 9e-05 tr|Q9MAZ6|Q9MAZ6_SOLLC Nonclathrin coat protein zeta2-COP OS=Sol... 50 1e-04 tr|B6UH71|B6UH71_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 49 2e-04 tr|A7P6M8|A7P6M8_VITVI Chromosome chr9 scaffold_7, whole genome ... 49 2e-04 tr|B7EMN5|B7EMN5_ORYSJ cDNA clone:J033065F01, full insert sequen... 49 3e-04 tr|B7EC39|B7EC39_ORYSJ cDNA clone:J013067M01, full insert sequen... 49 3e-04 tr|Q9MAZ0|Q9MAZ0_MAIZE Coatomer subunit zeta-1 OS=Zea mays GN=co... 48 3e-04 tr|B6T365|B6T365_MAIZE Coatomer subunit zeta-1 OS=Zea mays PE=2 ... 48 3e-04 tr|A9P8D5|A9P8D5_POPTR Putative uncharacterized protein OS=Popul... 48 4e-04 tr|Q7SHS6|Q7SHS6_NEUCR Putative uncharacterized protein OS=Neuro... 48 4e-04 tr|Q9MAZ7|Q9MAZ7_SOLLC Nonclathrin coat protein zeta1-COP OS=Sol... 47 6e-04 tr|A9NMP8|A9NMP8_PICSI Putative uncharacterized protein OS=Picea... 47 6e-04
>tr|A7QIQ0|A7QIQ0_VITVI Chromosome chr9 scaffold_104, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000350001 PE=4 SV=1 Length = 147
Score = 221 bits (563), Expect = 2e-56 Identities = 106/137 (77%), Positives = 120/137 (87%) Frame = +2
Query: 164 MLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYV 343 ML+ VLF N+ GNIL+ERF GV AEERLHWRSFLVKLG DNL G NEEL VA HKSVY+ Sbjct: 1 MLLAVLFANSEGNILVERFSGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60
Query: 344 VYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDE 523 VYT +GDVSI+VVGKDEYDELALAEV++VI SSVKDVC K PTER+FL+KYGK+CLCLDE Sbjct: 61 VYTVLGDVSIYVVGKDEYDELALAEVIFVIISSVKDVCGKPPTERLFLDKYGKICLCLDE 120
Query: 524 IVFQGTLEHTDKDRIRR 574 IV++G LE+ DKDRIRR Sbjct: 121 IVWKGMLENADKDRIRR 137
>tr|Q9XI32|Q9XI32_ARATH F9L1.32 protein (Putative uncharacterized protein At1g15370/F9L1_32) (Putative uncharacterized protein At1g15370) OS=Arabidopsis thaliana GN=At1g15370/F9L1_32 PE=2 SV=1 Length = 147
Score = 220 bits (561), Expect = 4e-56 Identities = 102/137 (74%), Positives = 120/137 (87%) Frame = +2
Query: 164 MLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYV 343 M++ VLF N+ GN+L+ERF GV AEERLHWRSFLVKLG DNL G NEEL VA HKSVY+ Sbjct: 1 MILAVLFANSVGNVLIERFNGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYI 60
Query: 344 VYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDE 523 VYT +GDVSIF+VGKDEYDELALAE +Y+IT++VKDVC K PTERVFL+KYG++CLCLDE Sbjct: 61 VYTMLGDVSIFLVGKDEYDELALAETIYIITAAVKDVCGKPPTERVFLDKYGRICLCLDE 120
Query: 524 IVFQGTLEHTDKDRIRR 574 IV+ G LE+TDKDRI+R Sbjct: 121 IVWNGLLENTDKDRIKR 137
>tr|A9P8V7|A9P8V7_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 147
Score = 220 bits (561), Expect = 4e-56 Identities = 102/137 (74%), Positives = 120/137 (87%) Frame = +2
Query: 164 MLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYV 343 M++ VLF N GNIL+ERF GV AEERLHWRSFLVKLG DNL G NEEL VASHKSVY+ Sbjct: 1 MILAVLFANVEGNILIERFSGVPAEERLHWRSFLVKLGADNLKGVRNEELLVASHKSVYI 60
Query: 344 VYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDE 523 VYT +GDVSIF+VGKDEYDELAL EV++ ITS++KDVC K PTER+FL+KYGK+CLCLDE Sbjct: 61 VYTVLGDVSIFIVGKDEYDELALTEVIFAITSALKDVCGKPPTERLFLDKYGKICLCLDE 120
Query: 524 IVFQGTLEHTDKDRIRR 574 IV++G LE+TDK+R+RR Sbjct: 121 IVWKGLLENTDKERVRR 137
>tr|Q75IP8|Q75IP8_ORYSJ Putative chloroplastic RNA-binding protein, with alternative splicing isoforms (Putative uncharacterized protein) (Pentatricopeptide, putative, expressed) OS=Oryza sativa subsp. japonica GN=LOC_Os03g63910 PE=4 SV=1 Length = 884
Score = 217 bits (553), Expect = 3e-55 Identities = 101/138 (73%), Positives = 123/138 (89%) Frame = +2
Query: 161 RMLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVY 340 +M++ VLF+N+ GNIL+ERF GV AEERLHWRSFLVKLG DNL GA NEEL VASHKSV Sbjct: 737 KMILAVLFSNSDGNILIERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELLVASHKSVS 796
Query: 341 VVYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLD 520 +VYT IGDV +++VGKDEYDELALAEV++ ITS+VKDVC K PTER+FL+KYG++CLCLD Sbjct: 797 IVYTMIGDVCLYIVGKDEYDELALAEVIFAITSAVKDVCGKPPTERLFLDKYGRICLCLD 856
Query: 521 EIVFQGTLEHTDKDRIRR 574 EIV++G LE+T+KDR+RR Sbjct: 857 EIVWKGLLENTEKDRVRR 874
>tr|B8ANR6|B8ANR6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14395 PE=4 SV=1 Length = 147
Score = 216 bits (551), Expect = 5e-55 Identities = 101/137 (73%), Positives = 122/137 (89%) Frame = +2
Query: 164 MLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYV 343 M++ VLF+N+ GNIL+ERF GV AEERLHWRSFLVKLG DNL GA NEEL VASHKSV + Sbjct: 1 MILAVLFSNSDGNILIERFHGVPAEERLHWRSFLVKLGADNLKGAKNEELLVASHKSVSI 60
Query: 344 VYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDE 523 VYT IGDV +++VGKDEYDELALAEV++ ITS+VKDVC K PTER+FL+KYG++CLCLDE Sbjct: 61 VYTMIGDVCLYIVGKDEYDELALAEVIFAITSAVKDVCGKPPTERLFLDKYGRICLCLDE 120
Query: 524 IVFQGTLEHTDKDRIRR 574 IV++G LE+T+KDR+RR Sbjct: 121 IVWKGLLENTEKDRVRR 137
>tr|A9RE27|A9RE27_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174107 PE=4 SV=1 Length = 146
Score = 215 bits (547), Expect = 2e-54 Identities = 101/137 (73%), Positives = 119/137 (86%) Frame = +2
Query: 164 MLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYV 343 M++CVLFTN AGN+LLERF G+ AEERLHWRSFLVKL +NL A ++E+FVASHKSV++ Sbjct: 1 MILCVLFTNRAGNVLLERFHGLPAEERLHWRSFLVKLTAENLKTARDDEVFVASHKSVFI 60
Query: 344 VYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDE 523 VYT IGD+ IF VGK+ YDELAL EVL +TSSVK+VC+K P+ER+FLEKYGKVCLCLDE Sbjct: 61 VYTVIGDICIFAVGKEVYDELALMEVLNAVTSSVKEVCRKDPSERLFLEKYGKVCLCLDE 120
Query: 524 IVFQGTLEHTDKDRIRR 574 I+ QG LEHTDKDRIRR Sbjct: 121 IISQGALEHTDKDRIRR 137
>tr|B4FEL3|B4FEL3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 147
Score = 213 bits (543), Expect = 5e-54 Identities = 98/137 (71%), Positives = 122/137 (89%) Frame = +2
Query: 164 MLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYV 343 M++ VLF N+ GNIL+ERF GV AEERLHWRSFLVKLG++NL G+ NEEL VASHKSV + Sbjct: 1 MILAVLFANSDGNILVERFHGVPAEERLHWRSFLVKLGSENLKGSKNEELHVASHKSVSI 60
Query: 344 VYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDE 523 VYT +GDV +++VGKDEYDELALAEV++ ITS+VKDVC K PTER+FL+KYG++CLCLDE Sbjct: 61 VYTTVGDVCLYIVGKDEYDELALAEVIFAITSAVKDVCAKPPTERLFLDKYGRICLCLDE 120
Query: 524 IVFQGTLEHTDKDRIRR 574 IV++G LE+T+KDR+RR Sbjct: 121 IVWKGLLENTEKDRVRR 137
>tr|Q2HUA7|Q2HUA7_MEDTR Longin-like OS=Medicago truncatula GN=MtrDRAFT_AC149206g17v2 PE=4 SV=1 Length = 147
Score = 212 bits (540), Expect = 1e-53 Identities = 100/137 (72%), Positives = 118/137 (86%) Frame = +2
Query: 164 MLMCVLFTNTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYV 343 M++ VLF N GNIL+ERF GV AEERLHWRSFLVKLG DNL G NEEL VA HKSVY+ Sbjct: 1 MILAVLFANAEGNILIERFHGVPAEERLHWRSFLVKLGADNLRGVKNEELLVACHKSVYI 60
Query: 344 VYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDE 523 VYT +GDVSI+VVGKD YDELAL+EV++ ITS+VKDVC K PTER FL+KYG++CLCLDE Sbjct: 61 VYTVLGDVSIYVVGKDAYDELALSEVIFTITSAVKDVCGKPPTERRFLDKYGRICLCLDE 120
Query: 524 IVFQGTLEHTDKDRIRR 574 IV++G LE+T+KDRI+R Sbjct: 121 IVWKGYLENTEKDRIKR 137
>tr|Q700A4|Q700A4_CICAR Putative uncharacterized protein (Fragment) OS=Cicer arietinum PE=2 SV=1 Length = 139
Score = 204 bits (519), Expect = 3e-51 Identities = 96/129 (74%), Positives = 113/129 (87%) Frame = +2
Query: 188 NTAGNILLERFQGVQAEERLHWRSFLVKLGTDNLSGAHNEELFVASHKSVYVVYTAIGDV 367 N GNIL+ERF GV AEERLHWRSFLVKLG DNL G NEEL VA HKSVY+VYT +GDV Sbjct: 1 NAEGNILIERFHGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYIVYTILGDV 60
Query: 368 SIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVCLCLDEIVFQGTLE 547 SI+VVGKDEYDELAL+EV++ ITS+VKDVC K PTER FL+KYG++CLCLDEIV++G LE Sbjct: 61 SIYVVGKDEYDELALSEVIFTITSAVKDVCGKPPTERRFLDKYGRICLCLDEIVWKGYLE 120
Query: 548 HTDKDRIRR 574 +T+K+RI+R Sbjct: 121 NTEKERIKR 129
>tr|A2XP92|A2XP92_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14398 PE=4 SV=1 Length = 119
Score = 130 bits (327), Expect = 5e-29 Identities = 58/82 (70%), Positives = 75/82 (91%) Frame = +2
Query: 329 KSVYVVYTAIGDVSIFVVGKDEYDELALAEVLYVITSSVKDVCKKAPTERVFLEKYGKVC 508 +SV +VYT IGDV +++VGKDEYDELALAEV++ ITS+VKDVC K PTER+FL+KYG++C Sbjct: 28 RSVSIVYTMIGDVCLYIVGKDEYDELALAEVIFAITSAVKDVCGKPPTERLFLDKYGRIC 87
Query: 509 LCLDEIVFQGTLEHTDKDRIRR 574 LCLDEIV++G LE+T+KDR+RR Sbjct: 88 LCLDEIVWKGLLENTEKDRVRR 109
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