DK952019 [AcEST]

DK952019
Clone id	TST38A01NGRL0012_P11
Library	TST38
Length	430
Definition	Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0012_P11. 5' end sequence.
Accession	DK952019
Tissue type	prothallia
Developmental stage	gametophyte
Contig ID	CL1435Contig1
Sequence	GAACAAAGTGAGGAGGAAGAGGAGATCTTTGGCAGTGAGAAAGCTTGAAGGTGTTCTCTC TCAGTGATCCTCCATCTCTCTGTCTCTTGTGCAGTTCCAAGGAAGGCGAAGGCAAGCTCA AAGGATGGGAAGAGCTCACACAATATCGCTCTCTTGGGGCGTGTGTGTGTTTTTGAAGGA CTAGAGGACCAAGGGAAGTCGGAGAAGCTAAGGCGAGTGCAGAAGCAAGGGGAAAGTGGA AGGACTGGGAAGAGGAAGATTACACCCTGTCTCGCACTCTTCTTTGCAACATTGCTTCTC TCTCTTTTCACTCTCATTCAAGAAGAAGGAAAGGAGCTTACAGTGCCCATTTGAGGCTAA CTTTGTAATTAGTTTTTGAATTTATTAAGCAATACAATTTTTGTTCAAAAAAAAAAAAAA AAAAAAAAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6N643
Definition	sp\|Q6N643\|KTHY_RHOPA Thymidylate kinase OS=Rhodopseudomonas palustris
Align length	34
Score (bit)	28.9
E-value	8.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK952019\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_P11, 5' (406 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6N643\|KTHY_RHOPA Thymidylate kinase OS=Rhodopseudomonas palu... 29 8.2 >sp\|Q6N643\|KTHY_RHOPA Thymidylate kinase OS=Rhodopseudomonas palustris GN=tmk PE=3 SV=1 Length = 230 Score = 28.9 bits (63), Expect = 8.2 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +1 Query: 142 NIALLGRVCVFEGLEDQGKSEKLRRVQKQGESGR 243 N +L GR FEG E GKS ++R + K+ E R Sbjct: 8 NRSLRGRFITFEGGEGAGKSTQIRLLAKRLEKAR 41
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A5N729
Definition	tr\|A5N729\|A5N729_CLOK5 DNA topoisomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Align length	42
Score (bit)	33.5
E-value	5.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK952019\|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0012_P11, 5' (406 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A5N729\|A5N729_CLOK5 DNA topoisomerase OS=Clostridium kluyveri... 33 5.5 >tr\|A5N729\|A5N729_CLOK5 DNA topoisomerase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=topA2 PE=3 SV=1 Length = 727 Score = 33.5 bits (75), Expect = 5.5 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +2 Query: 215 ECRSKGKVEGLGRGRLHPVSHSSLQHCFSLFSLSFKKKERSL 340 EC K +++G G R++ SH S + FS F+ FK+ E L Sbjct: 652 ECHKKLELKGEGEKRIYVCSHCSFREKFSSFNKRFKENEGKL 693