DK952036 |
Clone id |
TST38A01NGRL0013_A04 |
Library |
TST38 |
Length |
608 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_A04. 5' end sequence. |
Accession |
DK952036 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL2253Contig1 |
Sequence |
GAAAATTGGGCCAAATCTGCAGCTATTGCGGTTTTTGCGGTACTAGGTTTACCATTAGCG GTTACATATAGTGTGCCATACTCCATCACTGCAGAATTGGCATCGGAATCTGGAGGTGGA CAAGGTTTGGCCATGGGCGTCTTAAATCTGGCGGTTGTTGTACCTCAGATGATTGTGGCG TTGGGGGCTGGTCCGTGGGATGGTCTTTTTGGAGGTGGCAATGAGCCTGCTTTTGGCTTT GCTGCACTATTCGCATTTACTGCAGGGGTGGTTGCATGGGTTAAGCTTCCGCAACTTGCA AAAGGTGGCTATAGAGCAGCAGGCGTTGGACATGGCTTTGGTTGATAATCTGTGGTCCTA TCACCTTCTGTATTCTGTTGATTTGTTGAATTCTTTGAGCTGCTTAAGGATAAAGCCTTT AAGCAGCCACGTACCTAAGGCTGTCAGCTTAGTAGAGGTGAAATCTGTGTATTGAGGGTT GTTAAATGCATGTACAAATGTCATGCGAGGTACTGGTTGGTGAGTAAAAACACCATTTAC TGTACTGGCAAATTTTCCCATTGGAATTGATTGTCGGATATTGTGAACAAAAAAAAAAAA AAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O80605 |
Definition |
sp|O80605|SUC3_ARATH Sucrose transport protein SUC3 OS=Arabidopsis thaliana |
Align length |
72 |
Score (bit) |
119.0 |
E-value |
1.0e-26 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TK72 |
Definition |
tr|A9TK72|A9TK72_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
104 |
Score (bit) |
132.0 |
E-value |
1.0e-29 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952036|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_A04, 5' (585 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TK72|A9TK72_PHYPA Predicted protein OS=Physcomitrella paten... 132 1e-29 tr|A9RFV0|A9RFV0_PHYPA Predicted protein OS=Physcomitrella paten... 131 2e-29 tr|Q58I04|Q58I04_EUCUL Sucrose transporter 2 OS=Eucommia ulmoide... 127 4e-28 tr|Q000Y6|Q000Y6_HEVBR Sucrose transporter 2A OS=Hevea brasilien... 124 4e-27 tr|A5AEQ4|A5AEQ4_VITVI Putative uncharacterized protein OS=Vitis... 124 5e-27 tr|Q9SQK5|Q9SQK5_VITVI Putative sucrose transporter OS=Vitis vin... 123 7e-27 tr|A7QEH4|A7QEH4_VITVI Chromosome chr1 scaffold_84, whole genome... 123 9e-27 tr|Q9FVL6|Q9FVL6_SOLLC Sucrose transporter-like protein OS=Solan... 119 1e-25 tr|Q7X9X8|Q7X9X8_PLAMJ Sucrose transporter OS=Plantago major GN=... 119 1e-25 tr|Q6L4J3|Q6L4J3_SOLDE Putative sucrose transporter-like protein... 119 1e-25 tr|Q0KIV4|Q0KIV4_SOLDE Sucrose transporter-like protein, putativ... 119 1e-25 tr|Q0KIU7|Q0KIU7_SOLDE Sucrose transporter-like protein, putativ... 119 1e-25 tr|Q8LPM4|Q8LPM4_CITSI Sucrose transporter 2 OS=Citrus sinensis ... 119 2e-25 tr|Q3EC80|Q3EC80_ARATH Uncharacterized protein At2g02860.2 OS=Ar... 119 2e-25 tr|Q0WV10|Q0WV10_ARATH Sucrose transporter OS=Arabidopsis thalia... 119 2e-25 tr|Q000Y8|Q000Y8_HEVBR Sucrose transporter 2B OS=Hevea brasilien... 119 2e-25 tr|Q7Y1Q0|Q7Y1Q0_SOLTU Sucrose transporter-like protein OS=Solan... 118 2e-25 tr|Q6YK44|Q6YK44_ORYSJ Os02g0827200 protein OS=Oryza sativa subs... 117 4e-25 tr|Q1WLP2|Q1WLP2_MANES Sucrose transporter type 2 OS=Manihot esc... 117 4e-25 tr|B8AF63|B8AF63_ORYSI Putative uncharacterized protein OS=Oryza... 117 4e-25 tr|A3ACX3|A3ACX3_ORYSJ Putative uncharacterized protein OS=Oryza... 117 4e-25 tr|A4GXD0|A4GXD0_ANACO Sucrose transporter protein OS=Ananas com... 116 1e-24 tr|Q6PST5|Q6PST5_MAIZE Putative uncharacterized protein OS=Zea m... 115 2e-24 tr|Q84KR4|Q84KR4_ORYSJ Sucrose transporter OS=Oryza sativa subsp... 114 5e-24 tr|A9TG94|A9TG94_PHYPA Predicted protein OS=Physcomitrella paten... 110 8e-23 tr|A9TFQ0|A9TFQ0_PHYPA Predicted protein OS=Physcomitrella paten... 108 3e-22 tr|A9SKS1|A9SKS1_PHYPA Predicted protein OS=Physcomitrella paten... 107 5e-22 tr|Q9M422|Q9M422_HORVU Sucrose transporter 1 OS=Hordeum vulgare ... 106 8e-22 tr|Q4A1H2|Q4A1H2_HORVD Sucrose transporter 1 OS=Hordeum vulgare ... 106 8e-22 tr|Q9SXM0|Q9SXM0_MAIZE Sucrose Transporter OS=Zea mays GN=ZmSUT1... 105 1e-21
>tr|A9TK72|A9TK72_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_195881 PE=4 SV=1 Length = 605
Score = 132 bits (332), Expect = 1e-29 Identities = 63/104 (60%), Positives = 77/104 (74%) Frame = +1
Query: 4 NWAKSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVAL 183 +W + AA+ +F VLG PLA+TYSVPYS+TAEL ++SGGGQGLAMG+LNLAVV+PQ IVAL Sbjct: 493 SWNRLAALILFTVLGFPLAITYSVPYSVTAELTTDSGGGQGLAMGILNLAVVIPQTIVAL 552
Query: 184 GAGPWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGYR 315 GAGPWD LFGGGNEP KLP+L++ GY+ Sbjct: 553 GAGPWDALFGGGNEPAFRFAALAALAAGIIAVWKLPRLSRDGYQ 596
>tr|A9RFV0|A9RFV0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158803 PE=4 SV=1 Length = 513
Score = 131 bits (330), Expect = 2e-29 Identities = 64/102 (62%), Positives = 75/102 (73%) Frame = +1
Query: 7 WAKSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALG 186 W + AA+ +F VLG PLAVTYSVPYS+TAEL ++SGGGQGLAMG+LNLAVV+PQ IVALG Sbjct: 402 WNRIAAVILFTVLGFPLAVTYSVPYSLTAELTADSGGGQGLAMGILNLAVVIPQTIVALG 461
Query: 187 AGPWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGY 312 AGPWD LFGGGNEP KLP+L++ GY Sbjct: 462 AGPWDALFGGGNEPAFAFASLSALGAGVIAVWKLPRLSRHGY 503
>tr|Q58I04|Q58I04_EUCUL Sucrose transporter 2 OS=Eucommia ulmoides PE=2 SV=1 Length = 604
Score = 127 bits (320), Expect = 4e-28 Identities = 61/100 (61%), Positives = 75/100 (75%) Frame = +1
Query: 13 KSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAG 192 K+A++ VFA+LGLPLA+TYSVP+S+TAEL +++GGGQGLA+GVLNLA+VVPQMIV+LGAG Sbjct: 497 KTASLVVFAILGLPLAITYSVPFSVTAELTADAGGGQGLAIGVLNLAIVVPQMIVSLGAG 556
Query: 193 PWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGY 312 PWD LFGGGN P +KLP LA Y Sbjct: 557 PWDALFGGGNIPAFVLASLSALAAGVIATLKLPDLANSSY 596
>tr|Q000Y6|Q000Y6_HEVBR Sucrose transporter 2A OS=Hevea brasiliensis GN=SUT2A PE=2 SV=1 Length = 611
Score = 124 bits (311), Expect = 4e-27 Identities = 58/103 (56%), Positives = 76/103 (73%) Frame = +1
Query: 13 KSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAG 192 K AA+ VFA+LG PLA+TYSVP+S+TAEL ++SGGGQGLA+GVLNLA+V+PQMI++LGAG Sbjct: 504 KIAALIVFALLGFPLAITYSVPFSVTAELTADSGGGQGLAIGVLNLAIVIPQMIISLGAG 563
Query: 193 PWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGYRAA 321 PWD LFGGGN P +KLP L+ ++++ Sbjct: 564 PWDALFGGGNIPAFALASICALAAGVIATLKLPNLSSSSFKSS 606
>tr|A5AEQ4|A5AEQ4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011127 PE=4 SV=1 Length = 605
Score = 124 bits (310), Expect = 5e-27 Identities = 58/103 (56%), Positives = 76/103 (73%) Frame = +1
Query: 13 KSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAG 192 K A++ VFA+LG PL++TYSVP+SITAEL +++GGGQGLA+GVLNLA+V+PQMIV+LGAG Sbjct: 498 KIASLVVFALLGFPLSITYSVPFSITAELTADTGGGQGLAIGVLNLAIVIPQMIVSLGAG 557
Query: 193 PWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGYRAA 321 PWD LFGGGN P +KLP L+ Y+++ Sbjct: 558 PWDALFGGGNIPAFVLAALFALAAGVIAXLKLPNLSSSSYKSS 600
>tr|Q9SQK5|Q9SQK5_VITVI Putative sucrose transporter OS=Vitis vinifera GN=VvSUC12 PE=2 SV=1 Length = 612
Score = 123 bits (309), Expect = 7e-27 Identities = 58/103 (56%), Positives = 76/103 (73%) Frame = +1
Query: 13 KSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAG 192 K A++ VFA+LG PL++TYSVP+SITAEL +++GGGQGLA+GVLNLA+V+PQMIV+LGAG Sbjct: 498 KIASLVVFALLGFPLSITYSVPFSITAELTADTGGGQGLAIGVLNLAIVIPQMIVSLGAG 557
Query: 193 PWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGYRAA 321 PWD LFGGGN P +KLP L+ Y+++ Sbjct: 558 PWDALFGGGNIPAFVLAALFALAAGVIATLKLPNLSSSSYKSS 600
>tr|A7QEH4|A7QEH4_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037013001 PE=4 SV=1 Length = 555
Score = 123 bits (308), Expect = 9e-27 Identities = 58/103 (56%), Positives = 76/103 (73%) Frame = +1
Query: 13 KSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAG 192 K A++ VFA+LG PL++TYSVP+SITAEL +++GGGQGLA+GVLNLA+V+PQMIV+LGAG Sbjct: 448 KIASLVVFALLGFPLSITYSVPFSITAELTADTGGGQGLAIGVLNLAIVIPQMIVSLGAG 507
Query: 193 PWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGYRAA 321 PWD LFGGGN P +KLP L+ Y+++ Sbjct: 508 PWDALFGGGNIPAFVLAALFALAAGVIAILKLPNLSSSSYKSS 550
>tr|Q9FVL6|Q9FVL6_SOLLC Sucrose transporter-like protein OS=Solanum lycopersicum GN=SUT2 PE=2 SV=1 Length = 604
Score = 119 bits (299), Expect = 1e-25 Identities = 57/94 (60%), Positives = 72/94 (76%) Frame = +1
Query: 19 AAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAGPW 198 AA+ VF++LG+PLAVTYSVP+SITAEL +++GGGQGLA+GVLNLA+VVPQM+V+LGAGPW Sbjct: 500 AALVVFSLLGIPLAVTYSVPFSITAELTADAGGGQGLAIGVLNLAIVVPQMVVSLGAGPW 559
Query: 199 DGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLA 300 D LFGGGN P ++LP L+ Sbjct: 560 DALFGGGNIPAFALASLAALAAGIFAMLRLPNLS 593
>tr|Q7X9X8|Q7X9X8_PLAMJ Sucrose transporter OS=Plantago major GN=suc3 PE=2 SV=1 Length = 599
Score = 119 bits (299), Expect = 1e-25 Identities = 58/102 (56%), Positives = 73/102 (71%) Frame = +1
Query: 13 KSAAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAG 192 K A++ +F +LG PLAVTYSVP+S+TAEL ++SGGGQGLA+GVLNLA+VVPQMIV+LGAG Sbjct: 492 KIASLVIFTLLGFPLAVTYSVPFSVTAELTADSGGGQGLAIGVLNLAIVVPQMIVSLGAG 551
Query: 193 PWDGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLAKGGYRA 318 PWD LFGGGN P KLP L+ +++ Sbjct: 552 PWDALFGGGNVPAFALASVASLAAGVIAVHKLPVLSSDSFKS 593
>tr|Q6L4J3|Q6L4J3_SOLDE Putative sucrose transporter-like protein OS=Solanum demissum GN=PGEC219.5 PE=4 SV=1 Length = 603
Score = 119 bits (299), Expect = 1e-25 Identities = 57/94 (60%), Positives = 72/94 (76%) Frame = +1
Query: 19 AAIAVFAVLGLPLAVTYSVPYSITAELASESGGGQGLAMGVLNLAVVVPQMIVALGAGPW 198 AA+ VF++LG+PLAVTYSVP+SITAEL +++GGGQGLA+GVLNLA+VVPQM+V+LGAGPW Sbjct: 499 AALVVFSLLGIPLAVTYSVPFSITAELTADAGGGQGLAIGVLNLAIVVPQMVVSLGAGPW 558
Query: 199 DGLFGGGNEPXXXXXXXXXXXXXXXXWVKLPQLA 300 D LFGGGN P ++LP L+ Sbjct: 559 DALFGGGNIPAFVLASLAALAAGIFAMLRLPNLS 592
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