BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952042|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_A10, 5'
         (348 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55G23|Y9596_DICDI Putative transmembrane protein DDB_G026786...    30   4.8  

>sp|Q55G23|Y9596_DICDI Putative transmembrane protein DDB_G0267860
           OS=Dictyostelium discoideum GN=DDB_G0267860 PE=4 SV=1
          Length = 213

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 123 IF*RGHLFPRKDSSKKNAPIFSCKDKRVGKFRETKFG-QCPV 245
           IF   H       SKKN  I +CKDK++ KF   +    CP+
Sbjct: 140 IFKNFHEEKNYKESKKNELIINCKDKKLNKFNNNEIRVVCPI 181

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952042|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_A10, 5'
         (348 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3LWC1|Q3LWC1_BIGNA Ribosomal protein L3 OS=Bigelowiella nata...    34   4.1  
tr|A4S8F8|A4S8F8_OSTLU Predicted protein OS=Ostreococcus lucimar...    33   9.2  

>tr|Q3LWC1|Q3LWC1_BIGNA Ribosomal protein L3 OS=Bigelowiella natans
           GN=rpl3 PE=3 SV=1
          Length = 370

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 305 HIIHVKTMKLS*ATNIDHANDRTLSKLCFTKFPYPLVFTRKY 180
           H++ +KT+KL    N+D + D +     FT F Y L F  K+
Sbjct: 98  HLVKLKTIKLQRGLNLDQSKDISFDSQFFTNFTYSLQFIIKH 139


>tr|A4S8F8|A4S8F8_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_18359 PE=4 SV=1
          Length = 439

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 180 LEHSSWSCPFSETNAPSKIWDHPSNYTFLATIRIPRAIPF 61
           +EH  +S PFS+    + +W  P N+TF   + +   +PF
Sbjct: 129 IEHKIYSGPFSKAFPNADVWLPPKNWTFPVDVPLETYVPF 168