BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952052|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_A20, 5'
         (651 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54Z69|RL4_DICDI 60S ribosomal protein L4 OS=Dictyostelium di...    32   2.2  
sp|Q9D6Z1|NOL5A_MOUSE Nucleolar protein 5A OS=Mus musculus GN=No...    32   2.2  
sp|Q95K50|NOL5A_MACFA Nucleolar protein 5A OS=Macaca fasciculari...    32   2.2  
sp|O00567|NOL5A_HUMAN Nucleolar protein 5A OS=Homo sapiens GN=NO...    32   2.2  
sp|Q3SZ63|NOL5A_BOVIN Nucleolar protein 5A OS=Bos taurus GN=NOL5...    32   2.2  
sp|P71485|EMBA_MYCAV Probable arabinosyltransferase A OS=Mycobac...    32   2.9  

>sp|Q54Z69|RL4_DICDI 60S ribosomal protein L4 OS=Dictyostelium
           discoideum GN=rpl4 PE=3 SV=1
          Length = 369

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = +3

Query: 258 QAAFANKFNLAKVA-ANHYPNFVILSKSALQQLDRNF----QSSVSKYDRWMPRWM 410
           + A  ++ NL K+A   H   F+I +KSA +QLD  F    +SS  K    +PR M
Sbjct: 227 EVANVSRLNLLKLAPGGHLGRFIIWTKSAFEQLDSTFGTFAKSSAQKKGYTLPRPM 282


>sp|Q9D6Z1|NOL5A_MOUSE Nucleolar protein 5A OS=Mus musculus GN=Nol5a
           PE=1 SV=2
          Length = 580

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 240 VSSCKKQAAFANKFNLAKVA--ANHYPNFVILSKSALQQLDRNFQSSVSKYDRW 395
           +S+CK Q    + ++ AKV    N   N +I S S L QLD++  +   +   W
Sbjct: 139 LSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREW 192


>sp|Q95K50|NOL5A_MACFA Nucleolar protein 5A OS=Macaca fascicularis
           GN=NOL5A PE=2 SV=1
          Length = 594

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 240 VSSCKKQAAFANKFNLAKVA--ANHYPNFVILSKSALQQLDRNFQSSVSKYDRW 395
           +S+CK Q    + ++ AKV    N   N +I S S L QLD++  +   +   W
Sbjct: 139 LSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREW 192


>sp|O00567|NOL5A_HUMAN Nucleolar protein 5A OS=Homo sapiens GN=NOL5A
           PE=1 SV=4
          Length = 594

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 240 VSSCKKQAAFANKFNLAKVA--ANHYPNFVILSKSALQQLDRNFQSSVSKYDRW 395
           +S+CK Q    + ++ AKV    N   N +I S S L QLD++  +   +   W
Sbjct: 139 LSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREW 192


>sp|Q3SZ63|NOL5A_BOVIN Nucleolar protein 5A OS=Bos taurus GN=NOL5A
           PE=2 SV=1
          Length = 596

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 240 VSSCKKQAAFANKFNLAKVA--ANHYPNFVILSKSALQQLDRNFQSSVSKYDRW 395
           +S+CK Q    + ++ AKV    N   N +I S S L QLD++  +   +   W
Sbjct: 139 LSACKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREW 192


>sp|P71485|EMBA_MYCAV Probable arabinosyltransferase A
           OS=Mycobacterium avium GN=embA PE=3 SV=1
          Length = 1108

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
 Frame = +3

Query: 93  SLFLSREISYGLKFSAHNMRKDEAGH-----*RKSRITQNTKLLQKS*C*PYF*VSSCKK 257
           S+FL+  I  GL  +  + R D AGH      R++R+  +T LL  +       V+S  K
Sbjct: 660 SMFLTLSIITGLLAAWQHFRMDYAGHTEVKDSRRNRVLASTPLLVVATIMVVGEVASLTK 719

Query: 258 QAAF------ANKFNLAKVAANHYPNFVILSKSALQQLDRN 362
            A F        K NLA +A+   P    ++   L + D N
Sbjct: 720 GAVFRYPLYTTGKANLAAIASGLSPTSCAMADDVLAEPDAN 760

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952052|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_A20, 5'
         (651 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0YNI7|Q0YNI7_9DELT 4Fe-4S ferredoxin, iron-sulfur binding OS...    34   8.9  

>tr|Q0YNI7|Q0YNI7_9DELT 4Fe-4S ferredoxin, iron-sulfur binding
           OS=Geobacter sp. FRC-32 GN=GeobDRAFT_3317 PE=4 SV=1
          Length = 1018

 Score = 33.9 bits (76), Expect = 8.9
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 520 RDYISLGLTGAAPEQMLT--SSIPSGVDKMECDNVVLSLGLGPPAD 651
           R Y+S+G        +    S+   GV + E D VVLS+GL PPAD
Sbjct: 324 RSYVSIGRENPETRNVSIRYSTFDQGVKEEEFDMVVLSVGLNPPAD 369