DK952068 |
Clone id |
TST38A01NGRL0013_B14 |
Library |
TST38 |
Length |
550 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_B14. 5' end sequence. |
Accession |
DK952068 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL36Contig1 |
Sequence |
ATCTGCTGCGGAATACTCGTCGGCGACAGCCATGGGTCGAAGACCTGCAAGGTGCTACCG GCAGATTAAAAACAAGCCATATCCAAAATCTCGTTACTGTAGGGGTGTACCCGACCCAAA AATTCGTATATATGATGTTGGCATGAAGAAAAAGGGTGTTGATGAGTTTCCCTTTTGTGT GCACCTTGTGAGTTGGGAGAAAGAAAATGTCTCCAGTGAAGGCCTGGAGGCAGCTCGTAT TGCTTGCAACAAATACATGACAAAATTTGCTGGAAAGGATGCTTTTCATCTACGAGTTCG CGTGCACCCTTTCCATGTTCTTCGTATCAACAAGATGCTTTCATGTGCCGGAGCTGATAG GCTCCAGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCAGGGCACTTGTGCGCGAGTTGA CATTGGGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAATAATGGTATACATGCCCAGGA GGCCTTGCGTCGCGCTAAGTTCAAATTTCCTGGAAGGCAGAAGATTATTGTGAGCCGAAA ATGGGGATTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
173 |
Score (bit) |
348.0 |
E-value |
8.0e-96 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
173 |
Score (bit) |
355.0 |
E-value |
1.0e-96 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952068|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_B14, 5' (550 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 355 1e-96 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 350 3e-95 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 350 3e-95 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 350 3e-95 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 349 6e-95 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 348 1e-94 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 348 1e-94 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 348 1e-94 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 348 1e-94 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 347 2e-94 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 347 2e-94 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 347 2e-94 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 347 2e-94 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 345 7e-94 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 345 7e-94 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 345 7e-94 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 345 1e-93 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 345 1e-93 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 343 3e-93 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 343 5e-93 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 342 8e-93 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 342 8e-93 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 342 8e-93 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 337 2e-91 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 335 9e-91 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 332 6e-90 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 321 2e-86 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 318 1e-85 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 315 1e-84 tr|Q7X9L9|Q7X9L9_WHEAT QM (Fragment) OS=Triticum aestivum PE=2 SV=2 310 2e-83
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 355 bits (910), Expect = 1e-96 Identities = 169/173 (97%), Positives = 170/173 (98%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQGTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQKIIVSRKWGF Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGF 173
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 350 bits (898), Expect = 3e-95 Identities = 165/173 (95%), Positives = 169/173 (97%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGF Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGF 173
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 350 bits (898), Expect = 3e-95 Identities = 165/173 (95%), Positives = 169/173 (97%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGF Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGF 173
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 350 bits (898), Expect = 3e-95 Identities = 165/173 (95%), Positives = 169/173 (97%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGF Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGF 173
>tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=QM PE=2 SV=1 Length = 216
Score = 349 bits (895), Expect = 6e-95 Identities = 166/173 (95%), Positives = 168/173 (97%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKY+TKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYLTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGF Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGF 173
>tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2 SV=1 Length = 216
Score = 348 bits (892), Expect = 1e-94 Identities = 166/173 (95%), Positives = 167/173 (96%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN MLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINTMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGF Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGF 173
>tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 348 bits (892), Expect = 1e-94 Identities = 165/173 (95%), Positives = 167/173 (96%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWGF Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGF 173
>tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 348 bits (892), Expect = 1e-94 Identities = 165/173 (95%), Positives = 167/173 (96%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWGF Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGF 173
>tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 348 bits (892), Expect = 1e-94 Identities = 165/173 (95%), Positives = 167/173 (96%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWGF Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGF 173
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 347 bits (891), Expect = 2e-94 Identities = 165/173 (95%), Positives = 167/173 (96%) Frame = +2
Query: 32 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 211 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 212 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 391 SSE LEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 392 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGF 550 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKII+SRKWGF Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIISRKWGF 173
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