DK952120 |
Clone id |
TST38A01NGRL0013_D19 |
Library |
TST38 |
Length |
639 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_D19. 5' end sequence. |
Accession |
DK952120 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL466Contig1 |
Sequence |
CAGGCAGCAGTGCCATGGGCATGAGGGCGATTCCGTATCATGAGAGCAGAGCAGCTTCGT CCCCACCCATGGAAAGGAGGCCGCATCGTCAAAATGTGATACGCTCTCTGACGTCGTCCT TCGCAGGCATGGTGAATACAGGACAGGTGGGCAGAATAGTGGTGAACTGTAGCGCAGGGG ACAGCAGCTCCTCTGTCTCAACGACAACGGCAACACAAGCAGAGCAGAACGGGGAAGGGA TGTCTTGGGCAGCGGTGATTCCGGTGTCCGCGCTGCCCAAGGGTGAGCGCAGGTTAGTGC GTCAGGACGACCAGGATGTACTCCTACTCTGGTACAAAGGTGAGGTAGTTGCCATTGAGA ACACATCGCCTGCGGAAGGTGCCTACAGCGAGGGTTTTGTCAATGCCAAACTTACGCAGG ATGGCTGCATTGTTTGCCCTTCCACAGAGAGCACCTTTGACTTGAAGACTGGAGAGATCA AAGAGTGGTTTCCCTCAAATCCTGTGTTGAGGTTGCTGACCCCCCCTCTGAGGAAATTAA CTACGTATCCTGTCAAGATTGACTCGGATTACATTTATATCAGCACACAGTCCTCCTCCT CTGTGGACTCTGCAGAGATTGTCTTTGGTGGGCAGGTAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3U3T8 |
Definition |
sp|Q3U3T8|WDR62_MOUSE WD repeat-containing protein 62 OS=Mus musculus |
Align length |
82 |
Score (bit) |
33.1 |
E-value |
1.2 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FJL4 |
Definition |
tr|B4FJL4|B4FJL4_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
157 |
Score (bit) |
155.0 |
E-value |
3.0e-36 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952120|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_D19, 5' (639 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FJL4|B4FJL4_MAIZE Putative uncharacterized protein OS=Zea m... 155 3e-36 tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea... 154 4e-36 tr|B6U301|B6U301_MAIZE Rieske domain containing protein OS=Zea m... 153 7e-36 tr|Q9C9I7|Q9C9I7_ARATH Putative uncharacterized protein F26A9.12... 152 2e-35 tr|Q53N80|Q53N80_ORYSJ Os11g0242400 protein OS=Oryza sativa subs... 151 3e-35 tr|A7PPZ6|A7PPZ6_VITVI Chromosome chr18 scaffold_24, whole genom... 151 3e-35 tr|A2ZCZ7|A2ZCZ7_ORYSI Putative uncharacterized protein OS=Oryza... 151 3e-35 tr|A5C791|A5C791_VITVI Putative uncharacterized protein OS=Vitis... 149 1e-34 tr|A9TN65|A9TN65_PHYPA Predicted protein (Fragment) OS=Physcomit... 142 2e-32 tr|A7QHV1|A7QHV1_VITVI Chromosome undetermined scaffold_100, who... 110 9e-23 tr|A4RVD0|A4RVD0_OSTLU Predicted protein (Fragment) OS=Ostreococ... 106 1e-21 tr|Q01BP0|Q01BP0_OSTTA Rieske (ISS) OS=Ostreococcus tauri GN=Ot0... 105 2e-21 tr|A8J4Q7|A8J4Q7_CHLRE Rieske [2Fe-2S] protein OS=Chlamydomonas ... 96 2e-18 tr|A5BKA0|A5BKA0_VITVI Putative uncharacterized protein OS=Vitis... 78 4e-13 tr|A3IQW7|A3IQW7_9CHRO Rieske (2Fe-2S) region OS=Cyanothece sp. ... 61 7e-08 tr|B1WRW3|B1WRW3_CYAA5 Putative uncharacterized protein OS=Cyano... 60 1e-07 tr|B7K3M9|B7K3M9_SYNP8 Rieske (2Fe-2S) domain protein OS=Synecho... 59 2e-07 tr|B4C1K4|B4C1K4_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 59 2e-07 tr|B7KFC2|B7KFC2_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 58 4e-07 tr|B4AXJ6|B4AXJ6_9CHRO Rieske (2Fe-2S) domain protein OS=Cyanoth... 57 7e-07 tr|A0ZMK5|A0ZMK5_NODSP Rieske (2Fe-2S) region protein OS=Nodular... 55 5e-06 tr|B0C5T4|B0C5T4_ACAM1 Rieske, 2Fe-2S protein, putative OS=Acary... 50 9e-05 tr|A8YKW3|A8YKW3_MICAE Genome sequencing data, contig C325 OS=Mi... 49 2e-04 tr|B0JJI9|B0JJI9_MICAN Putative uncharacterized protein OS=Micro... 47 0.001 tr|B2J316|B2J316_NOSP7 Rieske (2Fe-2S) domain protein OS=Nostoc ... 47 0.001 tr|Q8YYC9|Q8YYC9_ANASP All0921 protein OS=Anabaena sp. (strain P... 45 0.003 tr|Q3M4G6|Q3M4G6_ANAVT Rieske (2Fe-2S) region OS=Anabaena variab... 45 0.003 tr|Q5X0Y2|Q5X0Y2_LEGPA Putative uncharacterized protein OS=Legio... 44 0.011 tr|A5II86|A5II86_LEGPC Putative uncharacterized protein OS=Legio... 44 0.011 tr|Q5WSR2|Q5WSR2_LEGPL Putative uncharacterized protein OS=Legio... 43 0.014
>tr|B4FJL4|B4FJL4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 276
Score = 155 bits (391), Expect = 3e-36 Identities = 76/157 (48%), Positives = 92/157 (58%) Frame = +3
Query: 168 CSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEV 347 C A + + G G SW V+P++ALP+GE WYK +V Sbjct: 45 CRAAEVSGAESSSAAAEGAGGGGGASWVPVVPLAALPRGERRVIVQDGEEILLLWYKNQV 104
Query: 348 VAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXX 527 AIEN SPAEGAY+EG +NAKLTQDGCIVCPST+STFDL+TGEIKEW+P NPV Sbjct: 105 FAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEWYPKNPVLRALTPA 164
Query: 528 XXXXXXYPVKIDSDYIYISTQSSSSVDSAEIVFGGQV 638 Y VK D + IYIS + SAEI+F G+V Sbjct: 165 LRKLFTYRVKTDEENIYISFSGADGAGSAEIIFSGKV 201
>tr|B8LNL5|B8LNL5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 302
Score = 154 bits (389), Expect = 4e-36 Identities = 74/135 (54%), Positives = 91/135 (67%), Gaps = 1/135 (0%) Frame = +3
Query: 234 EGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKL 413 + +W V+P SALPKGE WYK EVVAIEN SPAEGAYSEG VNAKL Sbjct: 91 DNKNWVPVVPASALPKGERRLIRQDGDNILLLWYKNEVVAIENKSPAEGAYSEGLVNAKL 150
Query: 414 TQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYIST-Q 590 TQDGCI+CP+T+STF+LKTG+I+EW+P+NPV YP K+DS+YIYIS + Sbjct: 151 TQDGCIMCPTTDSTFNLKTGDIEEWYPNNPVLRLLTPPIRKLFVYPTKVDSEYIYISMGR 210
Query: 591 SSSSVDSAEIVFGGQ 635 + + D EIVF G+ Sbjct: 211 AGGTEDPTEIVFSGK 225
>tr|B6U301|B6U301_MAIZE Rieske domain containing protein OS=Zea mays PE=2 SV=1 Length = 276
Score = 153 bits (387), Expect = 7e-36 Identities = 75/156 (48%), Positives = 91/156 (58%) Frame = +3
Query: 168 CSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEV 347 C A + + G G SW V+P++ALP+GE WYK +V Sbjct: 45 CRAAEVSGAESSSAAAEGAGGGGGASWVPVVPLAALPRGERRVIVQDGEEILLLWYKNQV 104
Query: 348 VAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXX 527 AIEN SPAEGAY+EG +NAKLTQDGCIVCPST+STFDL+TGEIKEW+P NPV Sbjct: 105 FAIENRSPAEGAYTEGLLNAKLTQDGCIVCPSTDSTFDLRTGEIKEWYPKNPVLRALTPA 164
Query: 528 XXXXXXYPVKIDSDYIYISTQSSSSVDSAEIVFGGQ 635 Y VK D + IYIS + SAEI+F G+ Sbjct: 165 LRKLFTYRVKTDEENIYISFSGADGAGSAEIIFSGK 200
>tr|Q9C9I7|Q9C9I7_ARATH Putative uncharacterized protein F26A9.12 (Putative uncharacterized protein At1g71500) (Putative uncharacterized protein) (Putative uncharacterized protein At1g71500/F26A9_12) OS=Arabidopsis thaliana GN=At1g71500/F26A9_12 PE=2 SV=1 Length = 287
Score = 152 bits (384), Expect = 2e-35 Identities = 74/134 (55%), Positives = 89/134 (66%), Gaps = 1/134 (0%) Frame = +3
Query: 237 GMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLT 416 G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NA+LT Sbjct: 78 GRNWVPVVPLSALPKGERRVVIQDDETILLLWYKNDVFAIENRSPAEGAYSEGLLNARLT 137
Query: 417 QDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQSS 596 QDGCIVCPST+STFDL+TGEI+EW+P NPV YPVK D + IYIS + S Sbjct: 138 QDGCIVCPSTDSTFDLRTGEIREWYPKNPVLRVLTPALRKLFVYPVKYDEENIYISIRDS 197
Query: 597 SSVD-SAEIVFGGQ 635 + +AEIVF G+ Sbjct: 198 GKTEAAAEIVFSGK 211
>tr|Q53N80|Q53N80_ORYSJ Os11g0242400 protein OS=Oryza sativa subsp. japonica GN=Os11g0242400 PE=2 SV=1 Length = 277
Score = 151 bits (382), Expect = 3e-35 Identities = 77/160 (48%), Positives = 100/160 (62%), Gaps = 1/160 (0%) Frame = +3
Query: 159 VVNCSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYK 338 VV C A + +A +G +W V+P++ALP+GE WYK Sbjct: 44 VVGCRAAEVSGAEPSAAAGEASGDG---NWVPVVPLAALPRGERRVIVQDGEEILLLWYK 100
Query: 339 GEVVAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXX 518 +V A+EN SPAEGAY+EG +NAKLTQDGCIVCP+T+STFDL+TGEIKEW+P+NPV Sbjct: 101 EQVYAVENRSPAEGAYTEGLLNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRAL 160
Query: 519 XXXXXXXXXYPVKIDSDYIYISTQSS-SSVDSAEIVFGGQ 635 YPVKID + IYIS + + +S SAEI+F G+ Sbjct: 161 TPALRKLFVYPVKIDGENIYISIKGAVTSGGSAEIIFSGK 200
>tr|A7PPZ6|A7PPZ6_VITVI Chromosome chr18 scaffold_24, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021852001 PE=4 SV=1 Length = 280
Score = 151 bits (382), Expect = 3e-35 Identities = 76/136 (55%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Frame = +3
Query: 231 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 410 G+G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAK Sbjct: 69 GDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYSEGLLNAK 128
Query: 411 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 590 LTQDGCIVCP+T+STFDL+TGEIK+W+P NPV YPVK D IYI Sbjct: 129 LTQDGCIVCPTTDSTFDLQTGEIKDWYPKNPVLRVLTPALRTLFIYPVKTDDKNIYIRMS 188
Query: 591 SSSSVD-SAEIVFGGQ 635 S D SAEIVF G+ Sbjct: 189 GGVSSDASAEIVFSGK 204
>tr|A2ZCZ7|A2ZCZ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35659 PE=4 SV=1 Length = 277
Score = 151 bits (382), Expect = 3e-35 Identities = 77/160 (48%), Positives = 100/160 (62%), Gaps = 1/160 (0%) Frame = +3
Query: 159 VVNCSAGDXXXXXXXXXXXQAEQNGEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYK 338 VV C A + +A +G +W V+P++ALP+GE WYK Sbjct: 44 VVGCRAAEVSGAEPSAAAGEASGDG---NWVPVVPLAALPRGERRVIVQDGEEILLLWYK 100
Query: 339 GEVVAIENTSPAEGAYSEGFVNAKLTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXX 518 +V A+EN SPAEGAY+EG +NAKLTQDGCIVCP+T+STFDL+TGEIKEW+P+NPV Sbjct: 101 EQVYAVENRSPAEGAYTEGLLNAKLTQDGCIVCPTTDSTFDLRTGEIKEWYPNNPVLRAL 160
Query: 519 XXXXXXXXXYPVKIDSDYIYISTQSS-SSVDSAEIVFGGQ 635 YPVKID + IYIS + + +S SAEI+F G+ Sbjct: 161 TPALRKLFVYPVKIDGENIYISIKGAVTSGGSAEIIFSGK 200
>tr|A5C791|A5C791_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018103 PE=4 SV=1 Length = 326
Score = 149 bits (376), Expect = 1e-34 Identities = 76/136 (55%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Frame = +3
Query: 231 GEGMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAK 410 G+G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAK Sbjct: 69 GDGGNWVPVVPLSALPKGERRVIIQDGETILLLWYKDQVYAIENRSPAEGAYSEGLLNAK 128
Query: 411 LTQDGCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQ 590 LTQDGCIVCP+T+STFDL+TG IK+W+P NPV YPVK D IYI Sbjct: 129 LTQDGCIVCPTTDSTFDLQTGXIKDWYPKNPVLRVLXPALRTLFIYPVKTDDKNIYIRMS 188
Query: 591 SSSSVD-SAEIVFGGQ 635 S D SAEIVF G+ Sbjct: 189 GGVSSDASAEIVFSGK 204
>tr|A9TN65|A9TN65_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_46753 PE=4 SV=1 Length = 222
Score = 142 bits (357), Expect = 2e-32 Identities = 68/130 (52%), Positives = 85/130 (65%) Frame = +3
Query: 243 SWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLTQD 422 +W VIP++ALP+GE WYK +V AIEN SPAEGAYSEG +NA+LT D Sbjct: 19 NWVPVIPLAALPRGERRLVRQDGETVLLLWYKNDVYAIENQSPAEGAYSEGLINARLTPD 78
Query: 423 GCIVCPSTESTFDLKTGEIKEWFPSNPVXXXXXXXXXXXXXYPVKIDSDYIYISTQSSSS 602 GCIVCPSTEST+DLK+G++KEW P+NPV YPVK++ + IYI+ + Sbjct: 79 GCIVCPSTESTYDLKSGKVKEWMPTNPVLRVLTPSLRDLVTYPVKVEDESIYINVRGGG- 137
Query: 603 VDSAEIVFGG 632 AEIVFGG Sbjct: 138 --YAEIVFGG 145
>tr|A7QHV1|A7QHV1_VITVI Chromosome undetermined scaffold_100, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013807001 PE=4 SV=1 Length = 149
Score = 110 bits (274), Expect = 9e-23 Identities = 60/139 (43%), Positives = 78/139 (56%) Frame = +3
Query: 57 SSPPMERRPHRQNVIRSLTSSFAGMVNTGQVGRIVVNCSAGDXXXXXXXXXXXQAEQNGE 236 SSP R+P ++ L + T + R + C A + ++ G+ Sbjct: 17 SSPLRRRKPLLHHLPPPLPRNDRSSALTLGLSRRRITCKATEVSVAE------ESSAAGD 70
Query: 237 GMSWAAVIPVSALPKGEXXXXXXXXXXXXXXWYKGEVVAIENTSPAEGAYSEGFVNAKLT 416 G +W V+P+SALPKGE WYK +V AIEN SPAEGAYSEG +NAKLT Sbjct: 71 GENWVPVVPLSALPKGERRVIIQDTETILLLWYKDQVYAIENRSPAEGAYSEGLLNAKLT 130
Query: 417 QDGCIVCPSTESTFDLKTG 473 QDGCIVCP+T+S FDL+TG Sbjct: 131 QDGCIVCPTTDSIFDLQTG 149
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