DK952124 |
Clone id |
TST38A01NGRL0013_D24 |
Library |
TST38 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_D24. 5' end sequence. |
Accession |
DK952124 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL72Contig2 |
Sequence |
CTTCGTTACCCTGTTTTTCGGCATCTTCAGAGTCGACCAAAAGGCTCAGAAGGAAGCGAG TCCAGTGTTTGCAAGACATCTTAATTCTCCTCCTTTGCCACTTAGCTCCATGGATTGCAC ATTTGCGGCGCAGGCCTCTCCGCAAACAGCTGCGGCTCCCCTAGCAGCCCTCTCACACAA GTCTTCTGTTCAGATCCCGCGGGGGGCTCTCCGCTCAAACTTCTGTGTGCAGACAGGTCT TTTAAAGTTGGATATTCAGAGAGGGATAAAGTCAAGGTTGAGGAGAAACAGGGGCAGTGT CAAGTTGGCAGTTGTTAGAGCAAGTGGTGATACTCAAGATAGTGGGTCTCCGATAGCTCC GTTCCAGCCAGAGTCTCCTACCGGTCAGTACTTGGCACAGCTTCTTCAAAGCCATCCCCA TCTTGTTCCTGCTGCTGTTGAGCAAGAGCTTGAGAAGCTTGCTGAGAATCGTACTTTGCA GGATTCTTCCACTGAGCCTAGCTCAAAGGGTTCCGAGCTTGTCCTCTACAGACGGATTGC TGAGCTCAAAGAGCAGGAAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8BI22 |
Definition |
sp|Q8BI22|CN145_MOUSE Uncharacterized protein C14orf145 homolog OS=Mus musculus |
Align length |
112 |
Score (bit) |
31.2 |
E-value |
3.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPW2 |
Definition |
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
95 |
Score (bit) |
101.0 |
E-value |
3.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952124|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_D24, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 101 3e-20 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 101 3e-20 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 94 7e-18 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 92 2e-17 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 92 2e-17 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 92 2e-17 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 91 6e-17 tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 89 1e-16 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 89 1e-16 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 87 8e-16 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 84 5e-15 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 82 2e-14 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 82 3e-14 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 80 6e-14 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 79 2e-13 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 78 3e-13 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 78 3e-13 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A5BZ18|A5BZ18_VITVI Putative uncharacterized protein OS=Vitis... 76 1e-12 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 75 3e-12 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 74 4e-12 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 74 4e-12 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 74 4e-12 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 70 8e-11 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 70 1e-10 tr|A8IKK2|A8IKK2_CHLRE Predicted protein OS=Chlamydomonas reinha... 55 3e-06 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 55 3e-06 tr|B6TD75|B6TD75_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05 tr|Q010E1|Q010E1_OSTTA Homology to unknown gene (Fragment) OS=Os... 52 3e-05
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 101 bits (251), Expect = 3e-20 Identities = 54/95 (56%), Positives = 66/95 (69%) Frame = +2
Query: 275 RLRRNRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELE 454 R RRN G VRA+G+ +S PIAP Q ESPTGQ+L+QLL+ HPHL+PAAVEQ+LE Sbjct: 74 RSRRNFG------VRAAGNYDESSKPIAPLQLESPTGQFLSQLLKDHPHLLPAAVEQQLE 127
Query: 455 KLAENRTLQDSSTEPSSKGSELVLYRRIAELKEQE 559 +L +R PSS +ELVLYRRIAE+K E Sbjct: 128 RLVADRDAAAQQDPPSSTSTELVLYRRIAEVKAAE 162
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 101 bits (251), Expect = 3e-20 Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 2/91 (2%) Frame = +2
Query: 293 GSVKLAVVRASGDTQDSGS--PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 466 G K +VRAS SGS PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 4 GCKKCTIVRASASADSSGSAAPIAPLQLESPIGQFLSQILISHPHLVPAAVEQQLEQLQT 63
Query: 467 NRTLQDSSTEPSSKGSELVLYRRIAELKEQE 559 +R ++ E S+ G+ELVLYRRIAE+K E Sbjct: 64 DRDAEEHKEESSASGTELVLYRRIAEVKANE 94
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 93.6 bits (231), Expect = 7e-18 Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 4/93 (4%) Frame = +2
Query: 293 GSVKLAVVRASGDTQDSGS----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKL 460 GS + VRAS + S PIAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L Sbjct: 59 GSRRCMAVRASSSSSSDSSGSIVPIAPLQLESPIGQFLSQILVSHPHLVPAAVEQQLEQL 118
Query: 461 AENRTLQDSSTEPSSKGSELVLYRRIAELKEQE 559 +R + +PS+ G++LVLYRRIAE K + Sbjct: 119 QTDRDSEKQKEDPSATGTDLVLYRRIAEAKAND 151
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 91.7 bits (226), Expect = 2e-17 Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 6/89 (6%) Frame = +2
Query: 311 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 475 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 476 LQDSSTEPSS-KGSELVLYRRIAELKEQE 559 Q + + +S G+++VLYRRIAELKE E Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENE 161
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 91.7 bits (226), Expect = 2e-17 Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 6/89 (6%) Frame = +2
Query: 311 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 475 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 476 LQDSSTEPSS-KGSELVLYRRIAELKEQE 559 Q + + +S G+++VLYRRIAELKE E Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENE 161
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 91.7 bits (226), Expect = 2e-17 Identities = 50/89 (56%), Positives = 65/89 (73%), Gaps = 6/89 (6%) Frame = +2
Query: 311 VVRASGDTQDSGS-----PIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRT 475 VVRAS + D+ S PIAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R Sbjct: 73 VVRASSASNDASSGSSPKPIAPLQLQSPAGQFLSQILVSHPHLVPAAVEQQLEQLQTDRD 132
Query: 476 LQDSSTEPSS-KGSELVLYRRIAELKEQE 559 Q + + +S G+++VLYRRIAELKE E Sbjct: 133 SQGQNKDSASVPGTDIVLYRRIAELKENE 161
>tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 401
Score = 90.5 bits (223), Expect = 6e-17 Identities = 45/84 (53%), Positives = 61/84 (72%) Frame = +2
Query: 308 AVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDS 487 A + +S D+ S + IAP Q ESP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R + Sbjct: 68 ASLSSSSDSSGSIASIAPLQLESPVGQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEKQ 127
Query: 488 STEPSSKGSELVLYRRIAELKEQE 559 EPS+ ++LVLYR+IAE+K E Sbjct: 128 KEEPSATSTDLVLYRKIAEVKANE 151
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 89.4 bits (220), Expect = 1e-16 Identities = 47/84 (55%), Positives = 63/84 (75%), Gaps = 1/84 (1%) Frame = +2
Query: 311 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 490 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 491 TEPSS-KGSELVLYRRIAELKEQE 559 + SS G+++VLYRRIAE+KE+E Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKE 152
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 89.4 bits (220), Expect = 1e-16 Identities = 47/84 (55%), Positives = 63/84 (75%), Gaps = 1/84 (1%) Frame = +2
Query: 311 VVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAENRTLQDSS 490 VV+AS S IAP Q +SP GQ+L+Q+L SHPHLVPAAVEQ+LE+L +R ++ S Sbjct: 69 VVKASASGDASTESIAPLQLKSPVGQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQS 128
Query: 491 TEPSS-KGSELVLYRRIAELKEQE 559 + SS G+++VLYRRIAE+KE+E Sbjct: 129 KDASSVLGTDIVLYRRIAEVKEKE 152
>tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia PE=2 SV=1 Length = 176
Score = 86.7 bits (213), Expect = 8e-16 Identities = 44/83 (53%), Positives = 56/83 (67%) Frame = +2
Query: 287 NRGSVKLAVVRASGDTQDSGSPIAPFQPESPTGQYLAQLLQSHPHLVPAAVEQELEKLAE 466 NR +L + A S +P+AP PESP+GQ+L +LLQSHPHLVPAA EQ+LE LAE Sbjct: 94 NRRKTRLTI-NAEMTASASTTPLAPLIPESPSGQFLTELLQSHPHLVPAAAEQQLETLAE 152
Query: 467 NRTLQDSSTEPSSKGSELVLYRR 535 R S +P+ G+ELVLY+R Sbjct: 153 AREAASSQEQPTPDGNELVLYKR 175
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