DK952128
Clone id TST38A01NGRL0013_E05
Library
Length 133
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_E05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
GTTTGTCATCTCATTTTGTGGACACTCAAAAAAGTAGCTATGCAGTTTTGGCATTCGAGT
GAAAAACGGCCCTCCTTTTCCTCCCGGGGACTGCCAGCCAAAGACTGGCCGTCATTTTCC
ACCTTCGAACATG
■■Homology search results ■■ -
sp_hit_id A5PMU4
Definition sp|A5PMU4|ANS1B_DANRE Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Danio rerio
Align length 42
Score (bit) 29.6
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952128|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_E05, 5'
(133 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A5PMU4|ANS1B_DANRE Ankyrin repeat and sterile alpha motif dom... 30 4.9
sp|Q8BIZ1|ANS1B_MOUSE Ankyrin repeat and sterile alpha motif dom... 29 6.3
sp|P0C6S7|ANS1B_RAT Ankyrin repeat and sterile alpha motif domai... 29 8.3

>sp|A5PMU4|ANS1B_DANRE Ankyrin repeat and sterile alpha motif
domain-containing protein 1B OS=Danio rerio GN=anks1b
PE=3 SV=1
Length = 1280

Score = 29.6 bits (65), Expect = 4.9
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2

Query: 8 ISFCGHSKK*LCSFGIRVKNGPPFPPG---DCQPKTGRHFPP 124
I+ GH K+ L S G R+ PP P + TG H PP
Sbjct: 944 INLIGHRKRILASLGDRLHEDPPQKPPRAISLREPTGNHTPP 985


>sp|Q8BIZ1|ANS1B_MOUSE Ankyrin repeat and sterile alpha motif
domain-containing protein 1B OS=Mus musculus GN=Anks1b
PE=1 SV=2
Length = 1259

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2

Query: 8 ISFCGHSKK*LCSFGIRVKNGPPFPPG---DCQPKTGRHFPP 124
IS GH K+ L S G R+ + PP P + +G H PP
Sbjct: 929 ISLIGHRKRILASLGDRLHDDPPQKPPRSITLREPSGNHTPP 970


>sp|P0C6S7|ANS1B_RAT Ankyrin repeat and sterile alpha motif
domain-containing protein 1B OS=Rattus norvegicus
GN=Anks1b PE=1 SV=1
Length = 1260

Score = 28.9 bits (63), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +2

Query: 8 ISFCGHSKK*LCSFGIRVKNGPPFPPG---DCQPKTGRHFPP 124
IS GH K+ L S G R+ PP P + +G H PP
Sbjct: 930 ISLIGHRKRILASLGDRLHEDPPQKPPRSITLREPSGNHTPP 971


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952128|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_E05, 5'
(133 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******