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NBDC - LSDB Archive
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DK952140
Clone id TST38A01NGRL0013_E17
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_E17. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GAGCTTTTGTGTCCCAGCCACTTTGCATACATAATGAAACAACTTCCCAGTGGTGGCTTC
AAAAAAGTTTAGACAGAGGGCTTCTGGACAAGGAAGCCGGAGACCTGCACCTGCCTCTTA
GCGTCAAAGCCCAGCACGCGGATGAAGGCTTCAGGATACTCCTTGGCGCACTCTGCAATT
TCACGCAGCACAGCAACGGCATCTTGGCAGCCAAACATGGGCAGCTTCCACATCACCAAA
TACCCCCCATCGGAATATCCGCTGCCGTGGAACTGCTCTCCGTACACCCTCCCGATTTTG
TCCAACTCAATGCAGGGGGTCCAGCCTTTTCGGACCATGAAGTCCACCTGCTTCGCAATC
TGCTCACTTGACAAAGGCAGCAAGTAGGACAGAGTCTCGAACTTCTTGTTGTCATACGGC
TTCCACATGAGCATGGCGCTCACACTGCTGCCATTACAGATGGCGAACGGGTTGGGGCTC
TTGGGGGCAAAAAGG
■■Homology search results ■■ -
sp_hit_id O48550
Definition sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica
Align length 138
Score (bit) 152.0
E-value 8.0e-37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952140|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_E17, 5'
         (495 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   152   8e-37
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   151   1e-36
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   151   1e-36
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   151   2e-36
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   151   2e-36
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   151   2e-36
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   151   2e-36
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   151   2e-36
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   150   4e-36
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   148   1e-35
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   148   2e-35
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   147   3e-35
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   147   3e-35
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   147   3e-35
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   147   3e-35
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   146   6e-35
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   146   6e-35
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   145   8e-35
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   145   8e-35
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   145   8e-35
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   145   1e-34
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   145   1e-34
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   145   1e-34
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   145   1e-34
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   145   1e-34
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   145   1e-34
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   145   1e-34
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   144   2e-34
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   144   2e-34

>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  152 bits (384), Expect = 8e-37
 Identities = 73/138 (52%), Positives = 90/138 (65%)
 Frame = -2

Query: 491 FAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPC 312
           FA  S  P    NG  V  M +W P   KKFETLSYL PL+ EQ+ ++VD+++R GW PC
Sbjct: 41  FADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPC 97

Query: 311 IELDKIGRVYGEQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVL 132
           IE  K+G VY E  +  GY DG Y  MWKLPMFGC D+  VL+E+ EC+K YP+ F R++
Sbjct: 98  IEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRII 157

Query: 131 GFDAKRQVQVSGFLVQKP 78
           GFD  RQVQ   FL  KP
Sbjct: 158 GFDNTRQVQCISFLTYKP 175


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  151 bits (382), Expect = 1e-36
 Identities = 69/127 (54%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELD-KIGRVYG 279
           NG  V  M +W P   KK+ETLSYL PLS E ++K++D+++R  W PC+E + + G VY 
Sbjct: 51  NGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYR 110

Query: 278 EQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 99
           E  H  GY DG Y  MWKLPMFGC D+  V++E+ EC KEYP AFIRV+GFD  RQVQ  
Sbjct: 111 EHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCI 170

Query: 98  GFLVQKP 78
            F+V KP
Sbjct: 171 SFIVAKP 177


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  151 bits (382), Expect = 1e-36
 Identities = 71/127 (55%), Positives = 84/127 (66%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIGRVYGE 276
           NG  VS M +W P   KKFETLSYL PLS E +AK+VD+++R  W PCIE  K G VY E
Sbjct: 51  NGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRE 110

Query: 275 QFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSG 96
                GY DG Y  MWKLPMFGC DA  V+ E+ E  K YPE F+R++GFD KRQVQ   
Sbjct: 111 NHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCIS 170

Query: 95  FLVQKPS 75
           F+  KP+
Sbjct: 171 FIAYKPT 177


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  151 bits (381), Expect = 2e-36
 Identities = 72/129 (55%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIGRVYGE 276
           NGS VS M +W+PY+N KFETLSYL PLS + +AKQ+D++++ GW PCIE D  G V  E
Sbjct: 52  NGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQGTVTRE 111

Query: 275 QFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEY-PEAFIRVLGFDAKRQVQVS 99
                GY DG Y  MWKLPMFGC D+ +VLREI EC K Y  + +IR LGFD  RQVQ +
Sbjct: 112 GSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCA 171

Query: 98  GFLVQKPSV 72
            F+V +P++
Sbjct: 172 SFIVHQPTL 180


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  151 bits (381), Expect = 2e-36
 Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELD-KIGRVYG 279
           NG  V  M +W P   KKFETLSYL PLSSEQ+AK+VD+++RK   PC+E + + G VY 
Sbjct: 53  NGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYR 112

Query: 278 EQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 99
           E     GY DG Y  MWKLPMFGC D+  VL+E+ EC K YP AFIR++GFD KRQVQ+ 
Sbjct: 113 EHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQII 172

Query: 98  GFLVQKP 78
            F+  KP
Sbjct: 173 SFIAYKP 179


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  151 bits (381), Expect = 2e-36
 Identities = 71/127 (55%), Positives = 84/127 (66%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIGRVYGE 276
           NG  VS M +W P   KKFETLSYL PLS E +AK+VD+++R  W PCIE  K G VY E
Sbjct: 51  NGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRE 110

Query: 275 QFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSG 96
                GY DG Y  MWKLPMFGC DA  V+ E+ E  K YPE F+R++GFD KRQVQ   
Sbjct: 111 NHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCIS 170

Query: 95  FLVQKPS 75
           F+  KP+
Sbjct: 171 FIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  151 bits (381), Expect = 2e-36
 Identities = 71/127 (55%), Positives = 84/127 (66%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIGRVYGE 276
           NG  VS M +W P   KKFETLSYL PLS E +AK+VD+++R  W PCIE  K G VY E
Sbjct: 51  NGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRE 110

Query: 275 QFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSG 96
                GY DG Y  MWKLPMFGC DA  V+ E+ E  K YPE F+R++GFD KRQVQ   
Sbjct: 111 NHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCIS 170

Query: 95  FLVQKPS 75
           F+  KP+
Sbjct: 171 FIAYKPT 177


>sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1
          Length = 177

 Score =  151 bits (381), Expect = 2e-36
 Identities = 71/127 (55%), Positives = 84/127 (66%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIGRVYGE 276
           NG  VS M +W P   KKFETLSYL PLS E +AK+VD+++R  W PCIE  K G VY E
Sbjct: 51  NGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRE 110

Query: 275 QFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSG 96
                GY DG Y  MWKLPMFGC DA  V+ E+ E  K YPE F+R++GFD KRQVQ   
Sbjct: 111 NHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCIS 170

Query: 95  FLVQKPS 75
           F+  KP+
Sbjct: 171 FIAYKPT 177


>sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU40A, chloroplastic OS=Lemna gibba GN=SSU40A PE=3 SV=1
          Length = 177

 Score =  151 bits (381), Expect = 2e-36
 Identities = 71/127 (55%), Positives = 84/127 (66%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIGRVYGE 276
           NG  VS M +W P   KKFETLSYL PLS E +AK+VD+++R  W PCIE  K G VY E
Sbjct: 51  NGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRE 110

Query: 275 QFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSG 96
                GY DG Y  MWKLPMFGC DA  V+ E+ E  K YPE F+R++GFD KRQVQ   
Sbjct: 111 NHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCIS 170

Query: 95  FLVQKPS 75
           F+  KP+
Sbjct: 171 FIAYKPT 177


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  150 bits (378), Expect = 4e-36
 Identities = 73/129 (56%), Positives = 90/129 (69%), Gaps = 3/129 (2%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIG---RV 285
           NGS V  M +W PY NKKFETLSYL  L+ EQ+ K+V+++++  W PC+E ++ G   RV
Sbjct: 61  NGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKRV 120

Query: 284 YGEQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQ 105
           YG   +  GY DG Y VMWKLPMFGC +A  VL E+ ECAK YP AFIRV+GFD  RQVQ
Sbjct: 121 YG---NSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQ 177

Query: 104 VSGFLVQKP 78
              F+V KP
Sbjct: 178 CISFIVHKP 186
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 140
Score (bit) 236.0
E-value 4.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952140|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_E17, 5'
         (495 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   236   4e-61
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   160   4e-38
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   159   9e-38
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   159   9e-38
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   157   2e-37
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   157   3e-37
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   155   1e-36
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   154   3e-36
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   153   4e-36
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   152   8e-36
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   151   2e-35
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   151   2e-35
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   151   2e-35
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   149   7e-35
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   149   9e-35
tr|A9NXP2|A9NXP2_PICSI Ribulose bisphosphate carboxylase small c...   149   9e-35
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9NNZ8|A9NNZ8_PICSI Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9NML5|A9NML5_PICSI Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9NMJ1|A9NMJ1_PICSI Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9NL36|A9NL36_PICSI Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   147   2e-34
tr|Q2QTJ7|Q2QTJ7_ORYSJ Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9NM29|A9NM29_PICSI Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9NLD6|A9NLD6_PICSI Ribulose bisphosphate carboxylase small c...   147   3e-34
tr|A9NKU8|A9NKU8_PICSI Ribulose bisphosphate carboxylase small c...   147   3e-34

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  236 bits (602), Expect = 4e-61
 Identities = 111/140 (79%), Positives = 123/140 (87%)
 Frame = -2

Query: 494 LFAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTP 315
           LFAPK  NP AI NGS +SAML+WKPYDNKKFETLSYL PL+++QIAKQV++MVRKGWTP
Sbjct: 34  LFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTP 93

Query: 314 CIELDKIGRVYGEQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRV 135
           CIE D IG VY E FHGSGY DG Y +MWKLPMFGC D+ +VLREIAECAKEYP AFIRV
Sbjct: 94  CIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRV 153

Query: 134 LGFDAKRQVQVSGFLVQKPS 75
           LGFDAKRQVQV+GFLV+KPS
Sbjct: 154 LGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  160 bits (404), Expect = 4e-38
 Identities = 77/143 (53%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
 Frame = -2

Query: 494 LFAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTP 315
           LFA K+    ++ NGS V  M +W P    KFET SYL PL+ +QIAKQVDFM+++   P
Sbjct: 37  LFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIP 96

Query: 314 CIELDKIGRVYGEQFHG---SGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAF 144
           CIE D +G V    F G   SGY DG Y  MWKLPMFGC D+  VLREI EC + +P  +
Sbjct: 97  CIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCW 156

Query: 143 IRVLGFDAKRQVQVSGFLVQKPS 75
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 157 VRVLGFDSKKQVQICGFLVARPN 179


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  159 bits (401), Expect = 9e-38
 Identities = 77/143 (53%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
 Frame = -2

Query: 494 LFAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTP 315
           LF  KS    ++ NGS V  M +W P    KFET SYL PLS +QIA+QVD+M+++   P
Sbjct: 42  LFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQVDYMIQQNLIP 101

Query: 314 CIELDKIGRVYGEQFHGSG---YSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAF 144
           CIE D +G V    F GSG   Y DG Y  MWKLPMFGC D+  VLREI EC   YP  +
Sbjct: 102 CIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCW 161

Query: 143 IRVLGFDAKRQVQVSGFLVQKPS 75
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 162 VRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  159 bits (401), Expect = 9e-38
 Identities = 76/143 (53%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
 Frame = -2

Query: 494 LFAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTP 315
           LF+ K+    A+ NGS V  M +W P    KFET SYL PL+ +QIAKQVD+M+++   P
Sbjct: 42  LFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIP 101

Query: 314 CIELDKIGRVYGEQFHG---SGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAF 144
           CIE D +G V    F G   SGY DG Y  MWKLPMFGC D+  VLREI EC  ++P  +
Sbjct: 102 CIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCW 161

Query: 143 IRVLGFDAKRQVQVSGFLVQKPS 75
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 162 VRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  157 bits (398), Expect = 2e-37
 Identities = 75/143 (52%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
 Frame = -2

Query: 494 LFAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTP 315
           LF+ K+    ++ NGS V  M +W P    KFET SYL PL+ +QIAKQVD+M+++   P
Sbjct: 72  LFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIP 131

Query: 314 CIELDKIGRVYGEQFHG---SGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAF 144
           CIE D +G V    F G   SGY DG Y  MWKLPMFGC D+  VLREI EC  ++P  +
Sbjct: 132 CIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCW 191

Query: 143 IRVLGFDAKRQVQVSGFLVQKPS 75
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 192 VRVLGFDSKKQVQICGFLVSRPN 214


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  157 bits (396), Expect = 3e-37
 Identities = 76/143 (53%), Positives = 96/143 (67%), Gaps = 3/143 (2%)
 Frame = -2

Query: 494 LFAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTP 315
           L A K+    ++ NGS V  M +W P    KFET SYL PL+ +QIAKQVDFM+++   P
Sbjct: 37  LSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIP 96

Query: 314 CIELDKIGRVYGEQFHG---SGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAF 144
           CIE D +G V    F G   SGY DG Y  MWKLPMFGC D+  VLREI EC + +P  +
Sbjct: 97  CIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCW 156

Query: 143 IRVLGFDAKRQVQVSGFLVQKPS 75
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 157 VRVLGFDSKKQVQICGFLVARPN 179


>tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small
           chain OS=Ammopiptanthus mongolicus PE=2 SV=1
          Length = 174

 Score =  155 bits (392), Expect = 1e-36
 Identities = 71/127 (55%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELD-KIGRVYG 279
           NG  V  ML+W P   KKFETLSYL PLS E + K+V++++RKGW PC+E + + G VY 
Sbjct: 43  NGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEFELEHGFVYR 102

Query: 278 EQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 99
           E     GY DG Y  MWKLPMFGC DA  V++E+ EC KEYP AF+R++GFD KRQVQ  
Sbjct: 103 ENNRSPGYYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQVQCI 162

Query: 98  GFLVQKP 78
            F+  KP
Sbjct: 163 SFIAYKP 169


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  155 bits (391), Expect = 1e-36
 Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
 Frame = -2

Query: 494 LFAPKSPNPFAICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTP 315
           LF+ ++    ++ NGS V  M +W P    KFET SYL PL+ ++IAKQVD+M+++   P
Sbjct: 41  LFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIP 100

Query: 314 CIELDKIGRVYGEQFHG---SGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAF 144
           CIE D +G V    F G   SGY DG Y  MWKLPMFGC D+  VLREI EC  ++P  +
Sbjct: 101 CIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCW 160

Query: 143 IRVLGFDAKRQVQVSGFLVQKPS 75
           +RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 161 VRVLGFDSKKQVQICGFLVSRPN 183


>tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small
           chain OS=Vitis vinifera GN=GSVIVT00031354001 PE=3 SV=1
          Length = 169

 Score =  155 bits (391), Expect = 1e-36
 Identities = 69/129 (53%), Positives = 88/129 (68%)
 Frame = -2

Query: 461 ICNGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELDKIGRVY 282
           + NGS    M  W P +NKKFETLSYL PLS + IAK++D+M++KGW PC+E D++G V+
Sbjct: 39  VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98

Query: 281 GEQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 102
            +     GY DG Y  +WKLPMFGC DA  VL EI EC K YP A+IR L FD + Q Q 
Sbjct: 99  RKNSQIPGYYDGRYWTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIRCLAFDNEHQGQC 158

Query: 101 SGFLVQKPS 75
             F++QKP+
Sbjct: 159 MAFVIQKPT 167


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  154 bits (388), Expect = 3e-36
 Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = -2

Query: 455 NGSSVSAMLMWKPYDNKKFETLSYLLPLSSEQIAKQVDFMVRKGWTPCIELD-KIGRVYG 279
           NG  V  M +W P   KK+ETLSYL PLS E ++K++D+++R  W PC+E + + G VY 
Sbjct: 51  NGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHGFVYR 110

Query: 278 EQFHGSGYSDGGYLVMWKLPMFGCQDAVAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 99
           E  H  GY DG Y  MWKLPMFGC D+  V++E+ EC KEYP AFIRV+GFD+ RQVQ  
Sbjct: 111 EHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQVQCI 170

Query: 98  GFLVQKP 78
            F+V KP
Sbjct: 171 SFIVSKP 177