DK952150 |
Clone id |
TST38A01NGRL0013_F04 |
Library |
TST38 |
Length |
599 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_F04. 5' end sequence. |
Accession |
DK952150 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL126Contig1 |
Sequence |
CGCAGATTCTCCCGTTCCAAGCCTTCAAGCCAGACCAGATCCAGCACAGGAAAATCTGTA ATTTCAAATGGCTGACGGAGAGGAAGTTCAACCACTTGTGTGCGACAATGGATCTGGGAT GGTCAAGGCTGGTTTCGCTGGCGATGATGCACCTCGGGCTGTATTTCCGAGTATAGTGGG TCGTCCTCGGCATACTGGTGTCATGGTGGGGATGGGTCAGAAAGATGCTTATGTTGGTGA TGAGGCTCAGTCTAAGCGAGGAATATTGACCTTGAAGTATCCTATTGAGCATGGTATCGT CACCAACTGGGATGACATGGAGAAAATCTGGCACCATACCTTCTATAATGAGCTGCGTGT TGCCCCGGAAGAACACCCAGTACTGCTTACTGAAGCTCCACTCAATCCAAAGGCAAACAG AGAAAAGATGACCCAAATCATGTTTGATACATTCAATGCACCAGCAATGTATGTTGCAAT TCAAGCAGTGCTATCTTTATATGCTAGTGGAAGGACGACAGGTATTGTACTCGATTCTGG TGATGGTGTCACACATACTGTGCCTATCTATGAGGGCTATGCACTGCCACATGCCATTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10AZ4 |
Definition |
sp|Q10AZ4|ACT3_ORYSJ Actin-3 OS=Oryza sativa subsp. japonica |
Align length |
177 |
Score (bit) |
359.0 |
E-value |
5.0e-99 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TYG3 |
Definition |
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
177 |
Score (bit) |
362.0 |
E-value |
7.0e-99 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952150|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_F04, 5' (599 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella paten... 362 7e-99 tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 362 9e-99 tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 ... 361 2e-98 tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella paten... 361 2e-98 tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella paten... 361 2e-98 tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea m... 360 4e-98 tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza... 359 6e-98 tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert seque... 359 6e-98 tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid... 358 2e-97 tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=... 358 2e-97 tr|O82565|O82565_ANEPH Actin 3 OS=Anemia phyllitidis PE=2 SV=1 358 2e-97 tr|B8AWW7|B8AWW7_ORYSI Putative uncharacterized protein OS=Oryza... 358 2e-97 tr|A3AZ49|A3AZ49_ORYSJ Putative uncharacterized protein OS=Oryza... 358 2e-97 tr|A8W4W6|A8W4W6_9FABA Actin OS=Glycyrrhiza uralensis PE=2 SV=1 357 2e-97 tr|A5BXV1|A5BXV1_VITVI Chromosome chr13 scaffold_17, whole genom... 357 2e-97 tr|Q9FUS4|Q9FUS4_SETIT Actin OS=Setaria italica PE=2 SV=1 357 3e-97 tr|Q94G12|Q94G12_MUSPR Actin OS=Musa ABB Group GN=ACT1 PE=3 SV=1 357 3e-97 tr|Q94DL4|Q94DL4_ORYSJ cDNA, clone: J100088I07, full insert sequ... 357 3e-97 tr|Q947D0|Q947D0_TRIMO Actin (Fragment) OS=Triticum monococcum G... 357 3e-97 tr|Q8H1L9|Q8H1L9_HORVU Actin OS=Hordeum vulgare PE=2 SV=1 357 3e-97 tr|Q7XZK0|Q7XZK0_GOSHI Actin OS=Gossypium hirsutum GN=ACT2 PE=2 ... 357 3e-97 tr|Q7XZJ1|Q7XZJ1_GOSHI Actin OS=Gossypium hirsutum GN=ACT14 PE=2... 357 3e-97 tr|Q6F4H4|Q6F4H4_TOBAC Actin OS=Nicotiana tabacum PE=2 SV=1 357 3e-97 tr|Q67G20|Q67G20_ORYSJ Actin-7, putative, expressed OS=Oryza sat... 357 3e-97 tr|Q65XH8|Q65XH8_ORYSJ Os05g0106600 protein OS=Oryza sativa subs... 357 3e-97 tr|Q5XPX5|Q5XPX5_SACOF Actin OS=Saccharum officinarum PE=2 SV=1 357 3e-97 tr|Q5EWZ5|Q5EWZ5_TRITU Actin OS=Triticum turgidum GN=ACT-1 PE=3 ... 357 3e-97 tr|Q5EWZ1|Q5EWZ1_WHEAT Actin OS=Triticum aestivum GN=ACT-1 PE=3 ... 357 3e-97 tr|Q541W9|Q541W9_ARATH Putative uncharacterized protein At3g1211... 357 3e-97 tr|B8BJ82|B8BJ82_ORYSI Putative uncharacterized protein OS=Oryza... 357 3e-97
>tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226658 PE=3 SV=1 Length = 377
Score = 362 bits (930), Expect = 7e-99 Identities = 174/177 (98%), Positives = 176/177 (99%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 Length = 377
Score = 362 bits (929), Expect = 9e-99 Identities = 175/177 (98%), Positives = 175/177 (98%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 M D EEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MGDAEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 PE=3 SV=1 Length = 377
Score = 361 bits (927), Expect = 2e-98 Identities = 173/177 (97%), Positives = 176/177 (99%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MADGEEVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225906 PE=3 SV=1 Length = 377
Score = 361 bits (927), Expect = 2e-98 Identities = 173/177 (97%), Positives = 176/177 (99%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MADGE+VQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_198730 PE=3 SV=1 Length = 377
Score = 361 bits (927), Expect = 2e-98 Identities = 173/177 (97%), Positives = 176/177 (99%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MADGEEVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 377
Score = 360 bits (923), Expect = 4e-98 Identities = 172/177 (97%), Positives = 176/177 (99%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14218 PE=4 SV=1 Length = 377
Score = 359 bits (922), Expect = 6e-98 Identities = 171/177 (96%), Positives = 176/177 (99%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 377
Score = 359 bits (922), Expect = 6e-98 Identities = 171/177 (96%), Positives = 176/177 (99%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MADGE++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 177
>tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid cultivar GN=ACT1 PE=2 SV=1 Length = 377
Score = 358 bits (918), Expect = 2e-97 Identities = 170/177 (96%), Positives = 177/177 (100%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MA+GEE+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
>tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=PACT4 PE=2 SV=1 Length = 377
Score = 358 bits (918), Expect = 2e-97 Identities = 170/177 (96%), Positives = 177/177 (100%) Frame = +2
Query: 68 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 247 MA+GEE+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 248 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 427 QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 428 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 598 MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 177
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