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NBDC - LSDB Archive
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DK952156
Clone id TST38A01NGRL0013_F11
Library
Length 665
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_F11. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
GCAGGTTCTTCCTCCCTGCTGGCCAGGCCCGAGCTCTTGGGACAGGCCATTACCGCCTCC
ACCACGTCTTCCTCTTCCCCCGTCTCCTCCCCATCCCCCGCCGTTGTGGCTATCTTAGGC
AAAAAGAAGGCCAAGCCTTCCCCCAAGGCCGCCAAAGCCGCCCCCGCCAACGAGGAGCTC
GCGAAGTGGTACGGTCCATCCCGGAGAATCTACCTTCCTGAGGGTTTGTTAGACAGATCT
GAGGTGCCTGCCTACCTCACAGGAGAAGTTCCAGGAGACTATGGATTTGATCCCTTCGGG
CTCAGCAAGAAACCTGCTGACTTTGACAAGTACCAAGCCTATGAACTCATTCATGCGAGG
TGGGCAATGTTGGGAGCAGCTGGTTTTGTCCTTCCTGAGGCCTTTAACAAGTATGGAGCC
ATCTGTGGACCAGAGGCAGTCTGGTTCAAGACTGGTGCGCTTCTTCTTGATGGGGGCTCC
CTTGAGTATTTTGGAGCTACTGTTCCTGTCAACCTTGCATTTGCTGTAATCGCAGAGGTG
GTCCTTGTTGGGGGAGCTGAATACTACAGAGCTTCCAATCTCCAGGGATTTGACAAGTTG
CATCCCGGAGGTCCCTTTGATCCTTTGGGTCTTGCAAAGGACCCAGATCAGTTTGCCCTC
CTGAA
■■Homology search results ■■ -
sp_hit_id Q9XF89
Definition sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana
Align length 166
Score (bit) 276.0
E-value 7.0e-74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952156|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_F11, 5'
         (665 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...   276   7e-74
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...   148   2e-35
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...   144   4e-34
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   141   4e-33
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   141   4e-33
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...   140   8e-33
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   139   1e-32
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   137   4e-32
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   137   4e-32
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   137   4e-32
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   137   5e-32
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   137   5e-32
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   137   7e-32
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   137   7e-32
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   136   9e-32
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   136   9e-32
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   136   1e-31
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   135   1e-31
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   135   1e-31
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   135   1e-31
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   135   2e-31
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   135   2e-31
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   135   3e-31
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   135   3e-31
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   135   3e-31
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   135   3e-31
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   135   3e-31
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   135   3e-31
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   134   3e-31
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   134   3e-31

>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
          Length = 280

 Score =  276 bits (706), Expect = 7e-74
 Identities = 128/166 (77%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
 Frame = +1

Query: 169 NEELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 348
           ++ELAKWYGP RRI+LP+GLLDRSE+P YL GEV GDYG+DPFGL KKP +F KYQA+EL
Sbjct: 56  SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFEL 115

Query: 349 IHARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAV 528
           IHARWAMLGAAGF++PEA NKYGA CGPEAVWFKTGALLLDG +L YFG  +P+NL  AV
Sbjct: 116 IHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAV 175

Query: 529 IAEVVLVGGAEYYRASNLQGF-DKLHPGGPFDPLGLAKDPDQFALL 663
           +AEVVL+GGAEYYR +N   F DKLHPGGPFDPLGLAKDP+Q ALL
Sbjct: 176 VAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALL 221


>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1
          Length = 253

 Score =  148 bits (374), Expect = 2e-35
 Identities = 81/168 (48%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
 Frame = +1

Query: 184 KWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARW 363
           ++YGP R  +L  G    ++ P YLTGE PGDYG+D  GLS  P  F +Y+  ELIHARW
Sbjct: 32  EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARW 89

Query: 364 AMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFG--ATVPVNLAFAVIA- 534
           A+LGA G + PE  ++Y  +   E VWFK GA +   G L Y G  + +      A +A 
Sbjct: 90  ALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAV 149

Query: 535 EVVLVGGAEYYRASN-----LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +VVL+G AE YRA+      L   D L+PGGPFDPLGLA DPD FA L
Sbjct: 150 QVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAEL 197


>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1
          Length = 256

 Score =  144 bits (363), Expect = 4e-34
 Identities = 77/166 (46%), Positives = 98/166 (59%), Gaps = 6/166 (3%)
 Frame = +1

Query: 184 KWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARW 363
           +WYGP R  +L       +  PAYLTGE PGDYG+D  GLS  P  F KY+  E+IHARW
Sbjct: 38  EWYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARW 94

Query: 364 AMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPV---NLAFAVIA 534
           A+LGA G + PE  + Y  +   E VWFK GA +   G L+Y G+   +   N+   +  
Sbjct: 95  ALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAV 154

Query: 535 EVVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +VVL+G  E YR +     +G D L+PG  FDPLGLA DPD FA L
Sbjct: 155 QVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAEL 200


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  141 bits (355), Expect = 4e-33
 Identities = 82/166 (49%), Positives = 101/166 (60%), Gaps = 7/166 (4%)
 Frame = +1

Query: 187 WYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 366
           WYGP R  YL        + P+YLTGE PGDYG+D  GLS  P  F + +  E+IH+RWA
Sbjct: 47  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103

Query: 367 MLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVIA---- 534
           MLGA G V PE  +K G   G EAVWFK GA +   G L+Y G    V+ A +++A    
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVH-AQSILAIWAV 161

Query: 535 EVVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +VVL+G  E YR       +G DK++PGG FDPLGLA DPD FA L
Sbjct: 162 QVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAEL 207


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  141 bits (355), Expect = 4e-33
 Identities = 82/166 (49%), Positives = 101/166 (60%), Gaps = 7/166 (4%)
 Frame = +1

Query: 187 WYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 366
           WYGP R  YL        + P+YLTGE PGDYG+D  GLS  P  F + +  E+IH+RWA
Sbjct: 47  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103

Query: 367 MLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVIA---- 534
           MLGA G V PE  +K G   G EAVWFK GA +   G L+Y G    V+ A +++A    
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVH-AQSILAIWAV 161

Query: 535 EVVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +VVL+G  E YR       +G DK++PGG FDPLGLA DPD FA L
Sbjct: 162 QVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAEL 207


>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1
           PE=3 SV=1
          Length = 253

 Score =  140 bits (352), Expect = 8e-33
 Identities = 81/166 (48%), Positives = 98/166 (59%), Gaps = 6/166 (3%)
 Frame = +1

Query: 184 KWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARW 363
           ++YGP+R  +L  G    +  PAYLTGE PGDYG+D  GLS  P  F +Y+  ELIHARW
Sbjct: 35  EFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARW 92

Query: 364 AMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPV---NLAFAVIA 534
           AMLGA G   PE   K G   G EAVWFK GA +   G L+Y G    V   N+      
Sbjct: 93  AMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAV 151

Query: 535 EVVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +V+L+G  E YR +     +G D L+PG  FDPLGLA DPD FA L
Sbjct: 152 QVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAEL 197


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  139 bits (351), Expect = 1e-32
 Identities = 80/166 (48%), Positives = 100/166 (60%), Gaps = 7/166 (4%)
 Frame = +1

Query: 187 WYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 366
           WYGP R  YL        ++P+YLTGE PGDYG+D  GLS  P  F K +  E+IH RWA
Sbjct: 49  WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 367 MLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVIA---- 534
           MLGA G V PE  +K G   G EAVWFK G+ +   G L+Y G    ++ A +++A    
Sbjct: 106 MLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIH-AQSILAIWAC 163

Query: 535 EVVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +VVL+G  E YR       +G D ++PGG FDPLGLA DPD FA L
Sbjct: 164 QVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAEL 209


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  137 bits (346), Expect = 4e-32
 Identities = 81/165 (49%), Positives = 97/165 (58%), Gaps = 6/165 (3%)
 Frame = +1

Query: 187 WYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 366
           WYGP R  YL        E P+YLTGE PGDYG+D  GLS  P  F K +  E+IH RWA
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 106

Query: 367 MLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFG--ATVPVNLAFAVIA-E 537
           MLGA G V PE F + G   G EAVWFK G+ +   G L+Y G  + V      A+ A +
Sbjct: 107 MLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 165

Query: 538 VVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           VVL+G  E YR +     +  D L+PGG FDPLGLA DP+ FA L
Sbjct: 166 VVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAEL 210


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  137 bits (346), Expect = 4e-32
 Identities = 79/163 (48%), Positives = 98/163 (60%), Gaps = 7/163 (4%)
 Frame = +1

Query: 187 WYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 366
           WYGP R  YL        + P+YLTGE PGDYG+D  GLS  P  F K +  E+IH RWA
Sbjct: 48  WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104

Query: 367 MLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVIA---- 534
           MLGA G V PE   K G   G EAVWFK G+ +   G L+Y G    V+ A +++A    
Sbjct: 105 MLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNPNLVH-AQSILAIWAC 162

Query: 535 EVVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQF 654
           +VVL+G  E YR       +G D+L+PGG FDPLGLA+DP+ F
Sbjct: 163 QVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205


>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13,
           chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1
          Length = 266

 Score =  137 bits (346), Expect = 4e-32
 Identities = 81/165 (49%), Positives = 97/165 (58%), Gaps = 6/165 (3%)
 Frame = +1

Query: 187 WYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIHARWA 366
           WYGP R  YL        E P+YLTGE PGDYG+D  GLS  PA F K +  E+IH RW 
Sbjct: 50  WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWT 106

Query: 367 MLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFG--ATVPVNLAFAVIA-E 537
           MLGA G V PE F + G   G EAVWFK G+ +   G L+Y G  + V      A+ A +
Sbjct: 107 MLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQ 165

Query: 538 VVLVGGAEYYRASN---LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           VVL+G  E YR +     +  D L+PGG FDPLGLA DP+ FA L
Sbjct: 166 VVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAEL 210
tr_hit_id A9U5B1
Definition tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 170
Score (bit) 301.0
E-value 3.0e-80
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952156|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_F11, 5'
         (665 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella paten...   301   3e-80
tr|A9NKM0|A9NKM0_PICSI Putative uncharacterized protein OS=Picea...   298   2e-79
tr|A9NR97|A9NR97_PICSI Putative uncharacterized protein OS=Picea...   296   1e-78
tr|Q41040|Q41040_PINSY Lhcb5 protein OS=Pinus sylvestris GN=Lhcb...   295   1e-78
tr|A9NSH6|A9NSH6_PICSI Putative uncharacterized protein OS=Picea...   295   2e-78
tr|A5B523|A5B523_VITVI Putative uncharacterized protein (Chromos...   292   1e-77
tr|A9RFL7|A9RFL7_PHYPA Predicted protein (Fragment) OS=Physcomit...   292   1e-77
tr|A9PJY2|A9PJY2_POPJC Putative uncharacterized protein OS=Popul...   289   9e-77
tr|A9PGZ3|A9PGZ3_POPTR Putative uncharacterized protein OS=Popul...   289   9e-77
tr|Q0PWS5|Q0PWS5_TOBAC Chloroplast pigment-binding protein CP26 ...   286   6e-76
tr|Q00321|Q00321_SOLLC Type I (26 kD) CP29 polypeptide OS=Solanu...   285   2e-75
tr|Q40039|Q40039_HORVU Precursor of CP29, core chlorophyll a/b b...   281   2e-74
tr|Q41747|Q41747_MAIZE Chlorophyll a/b-binding apoprotein CP26 O...   281   3e-74
tr|B4FL55|B4FL55_MAIZE Putative uncharacterized protein OS=Zea m...   281   3e-74
tr|A2ZD01|A2ZD01_ORYSI Putative uncharacterized protein OS=Oryza...   281   3e-74
tr|Q53N83|Q53N83_ORYSJ Chlorophyll A-B binding protein, expresse...   280   4e-74
tr|Q41746|Q41746_MAIZE Chlorophyll a/b-binding apoprotein CP26 O...   280   6e-74
tr|B7SAW2|B7SAW2_9POAL Chloroplast chlorophyll a/b binding prote...   276   6e-73
tr|Q39286|Q39286_BRAJU Chlorophyll a/b-binding protein CP26 in P...   271   3e-71
tr|B7SB29|B7SB29_9POAL LHCB5 OS=Phyllostachys edulis PE=2 SV=1        268   3e-70
tr|Q53N81|Q53N81_ORYSJ Chlorophyll A-B binding protein, expresse...   240   7e-62
tr|A6MZY2|A6MZY2_ORYSI Chloroplast chlorophyll a-b binding prote...   237   4e-61
tr|Q946F1|Q946F1_9ASTR ASCAB9 (Fragment) OS=Centromadia pungens ...   191   3e-47
tr|Q946G0|Q946G0_9ASTR ASCAB9-A (Fragment) OS=Dubautia laxa GN=A...   190   8e-47
tr|Q946F8|Q946F8_9ASTR ASCAB9-A (Fragment) OS=Dubautia sherffian...   190   8e-47
tr|Q946F7|Q946F7_ARGSA ASCAB9-B (Fragment) OS=Argyroxiphium sand...   190   8e-47
tr|Q946F5|Q946F5_9ASTR ASCAB9-C (Fragment) OS=Dubautia latifolia...   190   8e-47
tr|Q946F3|Q946F3_9ASTR ASCAB9-C (Fragment) OS=Dubautia scabra GN...   190   8e-47
tr|Q946F2|Q946F2_WILGY ASCAB9-C (Fragment) OS=Wilkesia gymnoxiph...   190   8e-47
tr|Q946F0|Q946F0_9ASTR ASCAB9 (Fragment) OS=Deinandra lobbii GN=...   190   8e-47

>tr|A9U5B1|A9U5B1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_156993 PE=4 SV=1
          Length = 270

 Score =  301 bits (770), Expect = 3e-80
 Identities = 141/170 (82%), Positives = 156/170 (91%), Gaps = 5/170 (2%)
 Frame = +1

Query: 169 NEELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 348
           NEELAKWYGP RRIYLPEGLL + E+PAYLTGEVPGDYG+DPFGLSKKP DFD+YQAYEL
Sbjct: 42  NEELAKWYGPDRRIYLPEGLLAKDEIPAYLTGEVPGDYGYDPFGLSKKPEDFDRYQAYEL 101

Query: 349 IHARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAV 528
           IHARWAMLGAAGFVLPEAFNK+GA+CGPEAVW+KTGALLL+G S++YFGATVP+NLA AV
Sbjct: 102 IHARWAMLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPINLAAAV 161

Query: 529 IAEVVLVGGAEYYRASN-----LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           IAEV+LVGGAEYYR++N     LQ  D+LHPGG FDPLGLAKDPDQFALL
Sbjct: 162 IAEVILVGGAEYYRSTNKDVYGLQDLDRLHPGGAFDPLGLAKDPDQFALL 211


>tr|A9NKM0|A9NKM0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 303

 Score =  298 bits (763), Expect = 2e-79
 Identities = 137/166 (82%), Positives = 154/166 (92%), Gaps = 1/166 (0%)
 Frame = +1

Query: 169 NEELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 348
           +EELAKWYGP RRI+LPEGLLDR+++P YL GEVPGDYG+DPFGLSKKP +FDKYQAYEL
Sbjct: 79  SEELAKWYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYEL 138

Query: 349 IHARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAV 528
           IHARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDGG+L YFGA++P+NL  AV
Sbjct: 139 IHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPINLIAAV 198

Query: 529 IAEVVLVGGAEYYRASNLQGF-DKLHPGGPFDPLGLAKDPDQFALL 663
           +AEV+LVGGAEYYRA+N   F DKLHPGGPFDPLGLAKDPDQFALL
Sbjct: 199 VAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALL 244


>tr|A9NR97|A9NR97_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 303

 Score =  296 bits (757), Expect = 1e-78
 Identities = 136/166 (81%), Positives = 153/166 (92%), Gaps = 1/166 (0%)
 Frame = +1

Query: 169 NEELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 348
           +EELAKWYGP RRI+LPEGLLDR+++P YL GEVPGDYG+DPFGL KKP +FDKYQAYEL
Sbjct: 79  SEELAKWYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLIKKPENFDKYQAYEL 138

Query: 349 IHARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAV 528
           IHARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDGG+L YFGA++P+NL  AV
Sbjct: 139 IHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPINLIAAV 198

Query: 529 IAEVVLVGGAEYYRASNLQGF-DKLHPGGPFDPLGLAKDPDQFALL 663
           +AEV+LVGGAEYYRA+N   F DKLHPGGPFDPLGLAKDPDQFALL
Sbjct: 199 VAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALL 244


>tr|Q41040|Q41040_PINSY Lhcb5 protein OS=Pinus sylvestris GN=Lhcb5*1
           PE=2 SV=1
          Length = 302

 Score =  295 bits (756), Expect = 1e-78
 Identities = 136/165 (82%), Positives = 151/165 (91%), Gaps = 1/165 (0%)
 Frame = +1

Query: 172 EELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELI 351
           EELAKWYGP RRI+LPEGLLDR ++P YL GEVPGDYG+DPFGL +KP +FDKYQAYELI
Sbjct: 79  EELAKWYGPDRRIFLPEGLLDRDDIPEYLNGEVPGDYGYDPFGLGRKPENFDKYQAYELI 138

Query: 352 HARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVI 531
           HARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDGG+L YFGA++P+NL  AV+
Sbjct: 139 HARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIPINLIAAVV 198

Query: 532 AEVVLVGGAEYYRASNLQGF-DKLHPGGPFDPLGLAKDPDQFALL 663
           AEVVLVGGAEYYRA+N   F DKLHPGGPFDPLGLAKDPDQFALL
Sbjct: 199 AEVVLVGGAEYYRATNGLNFDDKLHPGGPFDPLGLAKDPDQFALL 243


>tr|A9NSH6|A9NSH6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 303

 Score =  295 bits (754), Expect = 2e-78
 Identities = 136/166 (81%), Positives = 153/166 (92%), Gaps = 1/166 (0%)
 Frame = +1

Query: 169 NEELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 348
           +EELAKWYGP RRI+LPEGLLDR+++P YL GEVPGDYG+DPFGLSKKP +FDKYQAYEL
Sbjct: 79  SEELAKWYGPDRRIFLPEGLLDRADIPEYLNGEVPGDYGYDPFGLSKKPENFDKYQAYEL 138

Query: 349 IHARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAV 528
           IHARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDGG+L YFGA++ +NL  AV
Sbjct: 139 IHARWAMLGAAGFIIPEAFNKFGAYCGPEAVWFKTGALLLDGGTLSYFGASIHINLIAAV 198

Query: 529 IAEVVLVGGAEYYRASNLQGF-DKLHPGGPFDPLGLAKDPDQFALL 663
           +AEV+LVGGAEYYRA+N   F DKLHPGGPFDPLGLAKDPDQFALL
Sbjct: 199 VAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALL 244


>tr|A5B523|A5B523_VITVI Putative uncharacterized protein (Chromosome
           chr18 scaffold_61, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00031964001 PE=4 SV=1
          Length = 290

 Score =  292 bits (748), Expect = 1e-77
 Identities = 138/166 (83%), Positives = 149/166 (89%), Gaps = 1/166 (0%)
 Frame = +1

Query: 169 NEELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 348
           +EELAKWYGP RRI+LPEGLLDRSE+PAYLTGEVPGDYG+DPFGLSKKP DF KYQAYEL
Sbjct: 66  DEELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYEL 125

Query: 349 IHARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAV 528
           IHARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDG +L YFG  +P+NL FAV
Sbjct: 126 IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAV 185

Query: 529 IAEVVLVGGAEYYRASN-LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +AEVVLVGGAEYYR  N L   DKLHPGGPFDPLGLA DPDQ ALL
Sbjct: 186 VAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALL 231


>tr|A9RFL7|A9RFL7_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_52279 PE=4 SV=1
          Length = 227

 Score =  292 bits (747), Expect = 1e-77
 Identities = 137/168 (81%), Positives = 152/168 (90%), Gaps = 4/168 (2%)
 Frame = +1

Query: 172 EELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELI 351
           EELAKWYGP RRIYLPEGLL + E+P YLTGEVPGDYG+DPFGLSKKP DFD+YQAYELI
Sbjct: 1   EELAKWYGPDRRIYLPEGLLAKDEIPEYLTGEVPGDYGYDPFGLSKKPEDFDRYQAYELI 60

Query: 352 HARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVI 531
           HARWAMLGAAGFVLPEAFNK+GA+CGPEAVW+KTGALLL+G S++YFGATVP+NLA AVI
Sbjct: 61  HARWAMLGAAGFVLPEAFNKFGAVCGPEAVWWKTGALLLEGDSIKYFGATVPLNLAAAVI 120

Query: 532 AEVVLVGGAEYYRASNL----QGFDKLHPGGPFDPLGLAKDPDQFALL 663
           AEV+LVGGAEYYR++N        D+LHPGG FDPLGLAKDPDQFALL
Sbjct: 121 AEVILVGGAEYYRSTNKSPLGSDLDRLHPGGAFDPLGLAKDPDQFALL 168


>tr|A9PJY2|A9PJY2_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 302

 Score =  289 bits (740), Expect = 9e-77
 Identities = 133/164 (81%), Positives = 149/164 (90%), Gaps = 1/164 (0%)
 Frame = +1

Query: 175 ELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIH 354
           ELAKWYGP RRI+LP+GLLDRSE+P YLTGEVPGDYG+DPFGLSKKP DF+KYQA+ELIH
Sbjct: 68  ELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIH 127

Query: 355 ARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVIA 534
           ARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDG +L YFG  +P+NL  AV+A
Sbjct: 128 ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVA 187

Query: 535 EVVLVGGAEYYRASNLQGF-DKLHPGGPFDPLGLAKDPDQFALL 663
           EV+LVGGAEY+R +N  GF DKLHPGGPFDPLGLAKDPDQ ALL
Sbjct: 188 EVILVGGAEYFRITNGLGFDDKLHPGGPFDPLGLAKDPDQAALL 231


>tr|A9PGZ3|A9PGZ3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 290

 Score =  289 bits (740), Expect = 9e-77
 Identities = 133/164 (81%), Positives = 149/164 (90%), Gaps = 1/164 (0%)
 Frame = +1

Query: 175 ELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYELIH 354
           ELAKWYGP RRI+LP+GLLDRSE+P YLTGEVPGDYG+DPFGLSKKP DF+KYQA+ELIH
Sbjct: 68  ELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFEKYQAFELIH 127

Query: 355 ARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAVIA 534
           ARWAMLGAAGF++PEAFNK+GA CGPEAVWFKTGALLLDG +L YFG  +P+NL  AV+A
Sbjct: 128 ARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVA 187

Query: 535 EVVLVGGAEYYRASNLQGF-DKLHPGGPFDPLGLAKDPDQFALL 663
           EV+LVGGAEY+R +N  GF DKLHPGGPFDPLGLAKDPDQ ALL
Sbjct: 188 EVILVGGAEYFRITNGLGFDDKLHPGGPFDPLGLAKDPDQAALL 231


>tr|Q0PWS5|Q0PWS5_TOBAC Chloroplast pigment-binding protein CP26
           OS=Nicotiana tabacum GN=Lhcb5 PE=2 SV=1
          Length = 285

 Score =  286 bits (733), Expect = 6e-76
 Identities = 134/166 (80%), Positives = 148/166 (89%), Gaps = 1/166 (0%)
 Frame = +1

Query: 169 NEELAKWYGPSRRIYLPEGLLDRSEVPAYLTGEVPGDYGFDPFGLSKKPADFDKYQAYEL 348
           +EELAKWYGP RRI+LP+GLLDRSE+P YL GEVPGDYG+DPFGLSKKP DF KYQAYEL
Sbjct: 61  DEELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFAKYQAYEL 120

Query: 349 IHARWAMLGAAGFVLPEAFNKYGAICGPEAVWFKTGALLLDGGSLEYFGATVPVNLAFAV 528
           IHARWAMLGAAGFV+PEAFNK+GA CGPEAVWFKTGALLLDG +L YFG  +P+NL  AV
Sbjct: 121 IHARWAMLGAAGFVIPEAFNKFGADCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVVAV 180

Query: 529 IAEVVLVGGAEYYRASN-LQGFDKLHPGGPFDPLGLAKDPDQFALL 663
           +AEVVL+GGAEYYR +N L   DKLHPGGPFDPLGLAKDPDQ A+L
Sbjct: 181 VAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQAAIL 226