DK952174
Clone id TST38A01NGRL0013_G05
Library
Length 625
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_G05. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence
CCAACCCATAGACACACACACACACACACTCTTCGCAAGTCGCAAGCCCGCGTGCGCGCG
CACAGGCGCACACAGACACACACACACACACACACACAGGCGCGCAGACATTTCGATCCC
GTGCGGCGCTCACAGGGTTTGTTGAACATCGCATTCGCGCCTCGTTCTTGGTGGCCCAAT
TTGCGCTGTCCATGGAAGCTGTCGCCCATGCTTCGCCCCGCTCATTGAGTCCTGCGTCCA
GCCATGGCTTGCCTTCCCCTAGGCCAACGACAGCTACTCCCGCAGGGCTGTGGGTACAGT
CTCTGGGTTCGAAGCTCTCGTCCGCATCCCTCCCCTTGAAGAAGCCCTGTGCGTGGGGTC
AAAAGAGCAGGAGAGGACTCTGTATGGAAGTGAATGCATCTCTTATTGCCGATGATCTGG
ATGTAGTGCCTATGACGAGTAAGGACCCTGTCGATCAGCAGCAAGGGGATTCCGTCCTCA
TGGGAATTGAGAGCGTAGAGGAGCAGTCACCCTTGGCCTCCTCTCCTGGTGGCTTCTCAC
CCGAATCTCCCTTCGCTTTTGATCTCAGCTCAATGGCAGCCTCTGGAGCTTCAAATGAGG
CCCAGGTGCTTGTGGCTTCTGTGTC
■■Homology search results ■■ -
sp_hit_id Q9T1X0
Definition sp|Q9T1X0|VG24_BPMU Uncharacterized protein gp24 OS=Enterobacteria phage Mu
Align length 27
Score (bit) 33.9
E-value 0.67
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952174|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_G05, 5'
(611 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9T1X0|VG24_BPMU Uncharacterized protein gp24 OS=Enterobacter... 34 0.67
sp|P07287|ERME_SACEN rRNA adenine N-6-methyltransferase OS=Sacch... 32 3.3
sp|Q9BZ71|PITM3_HUMAN Membrane-associated phosphatidylinositol t... 31 5.7
sp|Q5N517|TILS_SYNP6 tRNA(Ile)-lysidine synthase OS=Synechococcu... 30 7.5
sp|A0AFI3|RHAD_LISW6 Rhamnulose-1-phosphate aldolase OS=Listeria... 30 7.5
sp|Q3UHE1|PITM3_MOUSE Membrane-associated phosphatidylinositol t... 30 7.5
sp|Q24UI6|IF2_DESHY Translation initiation factor IF-2 OS=Desulf... 30 9.7

>sp|Q9T1X0|VG24_BPMU Uncharacterized protein gp24 OS=Enterobacteria
phage Mu GN=24 PE=4 SV=1
Length = 64

Score = 33.9 bits (76), Expect = 0.67
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1

Query: 329 GCGRELRTQRLYPQPCGSSCRWPRGRQ 249
GCGRELR L QP + C W RG +
Sbjct: 38 GCGRELRPDVLRQQPMANYCHWCRGAE 64


>sp|P07287|ERME_SACEN rRNA adenine N-6-methyltransferase
OS=Saccharopolyspora erythraea (strain NRRL 23338)
GN=ermE PE=3 SV=2
Length = 381

Score = 31.6 bits (70), Expect = 3.3
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -1

Query: 263 PRGRQAMAGRRTQ*AGRSMGDSFHGQRKLGHQERGANAMFNKPCERRTGSK 111
PRG Q GRRT G HG R+ G Q+RG +RRTG +
Sbjct: 289 PRGGQPQRGRRT-------GGRDHGDRRTGGQDRG---------DRRTGGR 323


>sp|Q9BZ71|PITM3_HUMAN Membrane-associated phosphatidylinositol
transfer protein 3 OS=Homo sapiens GN=PITPNM3 PE=1 SV=2
Length = 974

Score = 30.8 bits (68), Expect = 5.7
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -2

Query: 550 GDSGEKPPGEEAKGDCSSTLSIPMRTESPCC*STGSLLVIGTTSRSSAIRD 398
G SG+ P KG SST P+ E C ++ L SS + D
Sbjct: 281 GPSGDSPASSSRKGSISSTQDTPVAVEEDCSLASSKRLSKSNIDISSGLED 331


>sp|Q5N517|TILS_SYNP6 tRNA(Ile)-lysidine synthase OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tilS
PE=3 SV=2
Length = 325

Score = 30.4 bits (67), Expect = 7.5
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = -3

Query: 270 SLA*GKASHGWTQDSMSGAKHGR------QLPWTAQIGPPRTRRE 154
SLA HGW DS + A+H R QLP+ Q P R E
Sbjct: 56 SLAIAHCDHGWRSDSTANAEHLRQLADQWQLPFYCQRSPEPPRSE 100


>sp|A0AFI3|RHAD_LISW6 Rhamnulose-1-phosphate aldolase OS=Listeria
welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 /
SLCC5334) GN=rhaD PE=3 SV=1
Length = 278

Score = 30.4 bits (67), Expect = 7.5
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = -2

Query: 286 PAGVAVVGLGEGKPWLDAGLNERGEAWATASMDS 185
P GVAVV PW+ AG NE GEA A DS
Sbjct: 175 PDGVAVV------PWMVAGTNELGEASAAKMNDS 202


>sp|Q3UHE1|PITM3_MOUSE Membrane-associated phosphatidylinositol
transfer protein 3 OS=Mus musculus GN=Pitpnm3 PE=1 SV=2
Length = 974

Score = 30.4 bits (67), Expect = 7.5
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -2

Query: 550 GDSGEKPPGEEAKGDCSSTLSIPMRTESPCC*STGSLLVIGTTSRSSAIRD 398
G SG+ P KG SST P+ E C ++ L SS + D
Sbjct: 281 GPSGDSPGSSSRKGSISSTQDTPVVVEEDCSLASSKRLSKSNVDVSSGVED 331


>sp|Q24UI6|IF2_DESHY Translation initiation factor IF-2
OS=Desulfitobacterium hafniense (strain Y51) GN=infB
PE=3 SV=1
Length = 971

Score = 30.0 bits (66), Expect = 9.7
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = -1

Query: 341 LQGEGCGRELRTQRLYPQPCGSSCRWPRGRQAMAGRRTQ*AGRSMGDSFHGQRKLGHQER 162
++GEG + R PQ P+G++ M G R Q R MGD GQR +G + +
Sbjct: 95 VEGEGRPQGQRPMGDRPQGQRPMGDRPQGQRPM-GDRPQ-GQRPMGDRPQGQRPMGDRPQ 152

Query: 161 GANAMFNKPCERR 123
G M ++P +R
Sbjct: 153 GQRPMGDRPQGQR 165


tr_hit_id A0QFR8
Definition tr|A0QFR8|A0QFR8_MYCA1 Aldehyde dehydrogenase (NAD) family protein OS=Mycobacterium avium (strain 104)
Align length 75
Score (bit) 37.0
E-value 0.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK952174|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_G05, 5'
(611 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A0QFR8|A0QFR8_MYCA1 Aldehyde dehydrogenase (NAD) family prote... 37 0.90
tr|Q4DWC7|Q4DWC7_TRYCR Putative uncharacterized protein OS=Trypa... 36 2.0
tr|Q4DP71|Q4DP71_TRYCR Putative uncharacterized protein OS=Trypa... 36 2.0
tr|B6KUM6|B6KUM6_TOXGO Proline-rich protein OS=Toxoplasma gondii... 35 4.5
tr|B3WT76|B3WT76_ECOLX Putative uncharacterized protein OS=Esche... 34 7.6
tr|B2NA30|B2NA30_ECOLX Putative uncharacterized protein OS=Esche... 34 7.6
tr|O13814|O13814_SCHPO Mdm10/Mdm12/Mmm1 complex subunit Mdm10 (P... 34 7.6

>tr|A0QFR8|A0QFR8_MYCA1 Aldehyde dehydrogenase (NAD) family protein
OS=Mycobacterium avium (strain 104) GN=MAV_2564 PE=4
SV=1
Length = 497

Score = 37.0 bits (84), Expect = 0.90
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -2

Query: 364 F*PHAQGFFKGRDADESFEPRDCTHSPAGVAVVGLGEGKPWLDAGLNERGEAWATA--SM 191
F P A+ F GR D S +PA V+GL DA + EA A A +
Sbjct: 13 FNPEARLFIDGRLRDSSTGKTVDNINPANEEVLGLAT-----DASAEDMEEAIAAARRAF 67

Query: 190 DSANWATKNEARMRC 146
DS +W+T +E R RC
Sbjct: 68 DSTDWSTNHEFRQRC 82


>tr|Q4DWC7|Q4DWC7_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053509733.70 PE=4 SV=1
Length = 503

Score = 35.8 bits (81), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3

Query: 240 WTQDSMSGAKHGRQLPWTAQIGPP 169
W +D++SG +HGR PW + IG P
Sbjct: 343 WRRDAVSGLRHGRMSPWRSSIGTP 366


>tr|Q4DP71|Q4DP71_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053509599.50 PE=4 SV=1
Length = 503

Score = 35.8 bits (81), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3

Query: 240 WTQDSMSGAKHGRQLPWTAQIGPP 169
W +D++SG +HGR PW + IG P
Sbjct: 343 WRKDAVSGLRHGRMSPWRSSIGTP 366


>tr|B6KUM6|B6KUM6_TOXGO Proline-rich protein OS=Toxoplasma gondii
ME49 GN=TGME49_020240 PE=4 SV=1
Length = 526

Score = 34.7 bits (78), Expect = 4.5
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Frame = -2

Query: 565 RSKAKGDSGEKPP-----GEEAKGDCSSTLSIPMRTESPCC*STGSLLVIGTTSRSSAIR 401
RS SG KP A G S T+ +P T+SPCC + GSL +S R
Sbjct: 210 RSPPSPASGGKPVEGPLHSTPATGSPSETVLVPADTQSPCCGAKGSL-----PKETSPTR 264

Query: 400 DAFTSI------QSPLLLF*PHAQGFFKGRDA 323
D T + SP L P FF G ++
Sbjct: 265 DIGTHVPGKRSPPSPSPLQGPRLASFFVGSES 296


>tr|B3WT76|B3WT76_ECOLX Putative uncharacterized protein
OS=Escherichia coli B171 GN=EcB171_5059 PE=4 SV=1
Length = 64

Score = 33.9 bits (76), Expect = 7.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1

Query: 329 GCGRELRTQRLYPQPCGSSCRWPRGRQ 249
GCGRELR L QP + C W RG +
Sbjct: 38 GCGRELRPDVLRQQPMANYCHWCRGAE 64


>tr|B2NA30|B2NA30_ECOLX Putative uncharacterized protein
OS=Escherichia coli 53638 GN=Ec53638_4330 PE=4 SV=1
Length = 64

Score = 33.9 bits (76), Expect = 7.6
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1

Query: 329 GCGRELRTQRLYPQPCGSSCRWPRGRQ 249
GCGRELR L QP + C W RG +
Sbjct: 38 GCGRELRPDVLRQQPMANYCHWCRGAE 64


>tr|O13814|O13814_SCHPO Mdm10/Mdm12/Mmm1 complex subunit Mdm10
(Predicted) OS=Schizosaccharomyces pombe GN=mdm10 PE=1
SV=1
Length = 370

Score = 33.9 bits (76), Expect = 7.6
Identities = 27/71 (38%), Positives = 34/71 (47%)
Frame = -1

Query: 404 KRCIHFHTESSPALLTPRTGLLQGEGCGRELRTQRLYPQPCGSSCRWPRGRQAMAGRRTQ 225
KRC+ F ESS A+L R GL REL T+ S+ RW G + G T+
Sbjct: 175 KRCLEFVYESSGAMLGVR-GLWNLNY--RELNTKINMENKAPSNMRWSLGFETYYGVLTK 231

Query: 224 *AGRSMGDSFH 192
AG S+G H
Sbjct: 232 CAGASLGMRLH 242