| DK952215 |
| Clone id |
TST38A01NGRL0013_H22 |
| Library |
TST38 |
| Length |
792 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_H22. 5' end sequence. |
| Accession |
DK952215 |
| Tissue type |
prothallia |
| Developmental stage |
gametophyte |
| Contig ID |
CL2776Contig1 |
| Sequence |
CGGAGAGGACCCACTTTATATTGAGGAAGATGATCCTAATTGGCTAGATGAGCCAGATGA TGGATGGGGCTACAAAGTCTCAGACATTTTCAAAGAAGATTTTGGAATTAAGAATCGCAA GAAGTACAACAATGATAGTGATGATGATGTCAATGACATTCCAGAAATGGACTGGGATCT CCAGCCTGAGACTTTTGCTGCAGTTGATGTGGATGCTGCGAGCTGGACGTCAACAGTTTT TGGTGATCCAAGCCCTTTGGTTGCCTTAATCTATGAAAGATATGGAAAAAAAGGTCGTGA GTGTTATCATGTGCTTCGAGAGCTGGAGGATGCTGCTAATCGTATGTGGGAAACCAAACG ATTGCCTCCCCGGCTTGTAAAAATACATGCATCTTTTGAGGAGGATCTTGTTGGCGCGAT AGGAATCAAAGAAATTCCAACACTTCTGTTTATCAAGGGACAAAAGTTGATACACTATCA GTCAGGATACTTAACTGCAGATGACCTTTTAAAAATTATTAGCTACTTTTATCATGGAGC TGCTAAGGCCAAAATGTTTGAAGGTCCCGCCGAAGGAAAAGGCACCCCCTAAGCTCCTAA AGAGTCGATAATCCTGGAAAATAAGCTTGGTAAAATGGCTGCTGGGCTTCCAAGGGGAAT TGCTCTGGTTTTTCCCTTGGACCAAAAAAGCGGGGGGGTTAAATTGCCCCCCGGGGTTTT AATAAGAGGGGGTTTTTTTCCTTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P66928 |
| Definition |
sp|P66928|THIO_HELPY Thioredoxin OS=Helicobacter pylori |
| Align length |
42 |
| Score (bit) |
34.7 |
| E-value |
0.57 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TWS6 |
| Definition |
tr|A9TWS6|A9TWS6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
182 |
| Score (bit) |
131.0 |
| E-value |
4.0e-29 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952215|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_H22, 5' (749 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TWS6|A9TWS6_PHYPA Predicted protein OS=Physcomitrella paten... 131 4e-29 tr|A7QB17|A7QB17_VITVI Chromosome chr5 scaffold_72, whole genome... 123 1e-26 tr|A5ALM5|A5ALM5_VITVI Putative uncharacterized protein OS=Vitis... 123 1e-26 tr|A7Q1P7|A7Q1P7_VITVI Chromosome chr7 scaffold_44, whole genome... 122 3e-26 tr|Q9SKB6|Q9SKB6_ARATH Putative uncharacterized protein At2g3184... 121 6e-26 tr|Q5QLS7|Q5QLS7_ORYSJ cDNA clone:J013002F09, full insert sequen... 121 6e-26 tr|Q67XP3|Q67XP3_ARATH Putative uncharacterized protein At4g2859... 119 2e-25 tr|Q84RF5|Q84RF5_ARATH Putative uncharacterized protein At2g3184... 119 3e-25 tr|B6TC88|B6TC88_MAIZE Thioredoxin family protein OS=Zea mays PE... 116 1e-24 tr|A2ZZ71|A2ZZ71_ORYSJ Putative uncharacterized protein OS=Oryza... 112 3e-23 tr|A2Z5H3|A2Z5H3_ORYSI Putative uncharacterized protein OS=Oryza... 112 3e-23 tr|Q9M0H2|Q9M0H2_ARATH Putative uncharacterized protein AT4g2859... 103 9e-21 tr|A9P058|A9P058_PICSI Putative uncharacterized protein OS=Picea... 103 1e-20 tr|Q6AT71|Q6AT71_ORYSJ cDNA clone:J013081M10, full insert sequen... 102 2e-20 tr|Q0DI48|Q0DI48_ORYSJ Os05g0417200 protein OS=Oryza sativa subs... 102 2e-20 tr|A2Y4Q4|A2Y4Q4_ORYSI Putative uncharacterized protein OS=Oryza... 102 2e-20 tr|B4FN47|B4FN47_MAIZE Putative uncharacterized protein OS=Zea m... 98 5e-19 tr|Q1PEX9|Q1PEX9_ARATH Putative uncharacterized protein OS=Arabi... 64 1e-08 tr|Q688K6|Q688K6_ORYSJ Putative uncharacterized protein P0579A05... 62 4e-08 tr|B6T6S0|B6T6S0_MAIZE Putative uncharacterized protein OS=Zea m... 47 0.001 tr|A9DPC4|A9DPC4_9FLAO Thioredoxin C-2 OS=Kordia algicida OT-1 G... 41 0.097 tr|Q2KZZ7|Q2KZZ7_BORA1 Thioredoxin 2 OS=Bordetella avium (strain... 40 0.13 tr|A9IP21|A9IP21_BORPD Thioredoxin OS=Bordetella petrii (strain ... 40 0.13 tr|A3J6S1|A3J6S1_9FLAO Thioredoxin C-2 OS=Flavobacteria bacteriu... 40 0.13 tr|Q03JC0|Q03JC0_STRTD N-(5'-phosphoribosyl)anthranilate isomera... 40 0.17 tr|Q9GPH2|Q9GPH2_BOMMO Protein disulfide isomerase OS=Bombyx mor... 40 0.22 tr|Q7WI31|Q7WI31_BORBR Thioredoxin 2 OS=Bordetella bronchiseptic... 39 0.28 tr|Q7VXN6|Q7VXN6_BORPE Thioredoxin 2 OS=Bordetella pertussis GN=... 39 0.28 tr|Q5LYI6|Q5LYI6_STRT1 N-(5'-phosphoribosyl)anthranilate isomera... 39 0.37 tr|Q9X0M6|Q9X0M6_THEMA Putative uncharacterized protein OS=Therm... 38 0.63
>tr|A9TWS6|A9TWS6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172419 PE=4 SV=1 Length = 428
Score = 131 bits (330), Expect = 4e-29 Identities = 68/182 (37%), Positives = 109/182 (59%), Gaps = 3/182 (1%) Frame = +2
Query: 5 EDPLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDLQ 184 E PL++EE+DP+W DE DDGWG++ S F + IKN ++ +DDV+D ++DW+ + Sbjct: 230 ETPLWMEEEDPSWPDEADDGWGFRTSQFF-DKVTIKNNS--TDEDNDDVDDEDKIDWEAE 286
Query: 185 PETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETKRL 364 + ++ A W VF PSPLV ++ RYG + + + L EL+ A +WE+ + Sbjct: 287 MDDGIIKEIITAEWEMHVFATPSPLVVYVFARYGPRSLDSWKTLAELQKAVTSIWESAKA 346
Query: 365 PPRLVKIHASFEEDLVGAIGIK--EIPTLLFIKGQKLIHYQSGYLTADDLLKIISY-FYH 535 P R VKI E DL A+ IK + P +LFIK K ++ T+++L+++I++ FY+ Sbjct: 347 PLRAVKIDVGLEVDLGTALNIKPDDCPQILFIKNGKGLYKLEEKRTSEELVQLITHLFYN 406
Query: 536 GA 541 GA Sbjct: 407 GA 408
>tr|A7QB17|A7QB17_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034767001 PE=4 SV=1 Length = 239
Score = 123 bits (309), Expect = 1e-26 Identities = 71/190 (37%), Positives = 102/190 (53%) Frame = +2
Query: 11 PLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDLQPE 190 PL +EEDDPNW E DG G+ + F + IKN KK D DD+ + E+ W Sbjct: 44 PLVVEEDDPNW-PEDADGRGFNLDQFF-DKITIKNVKKDKGD-DDNYDSEDEIVWQDDNY 100
Query: 191 TFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETKRLPP 370 D+ A W TV D SPL+ L++ RY K+ +E + ELE A + +W + P Sbjct: 101 IRPIKDIKTAEWEETVLKDISPLIVLVHNRY-KRPKENQKIREELEKAVHIIWNCRLPSP 159
Query: 371 RLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHGAAKA 550 R V I A E DLV A+ + P ++F K K++H + TAD+L KI+++FY+GAAK Sbjct: 160 RCVAIDAVVEVDLVSALQVSVFPEVIFTKAGKILHREKVIQTADELSKIMAFFYYGAAKP 219
Query: 551 KMFEGPAEGK 580 G + + Sbjct: 220 PCLNGTGDSQ 229
>tr|A5ALM5|A5ALM5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004630 PE=4 SV=1 Length = 324
Score = 123 bits (309), Expect = 1e-26 Identities = 71/190 (37%), Positives = 102/190 (53%) Frame = +2
Query: 11 PLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDLQPE 190 PL +EEDDPNW E DG G+ + F + IKN KK D DD+ + E+ W Sbjct: 129 PLVVEEDDPNW-PEDADGRGFNLDQFF-DKITIKNVKKDKGD-DDNYDSEDEIVWQDDNY 185
Query: 191 TFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETKRLPP 370 D+ A W TV D SPL+ L++ RY K+ +E + ELE A + +W + P Sbjct: 186 IRPIKDIKTAEWEETVLKDISPLIVLVHNRY-KRPKENQKIREELEKAVHIIWNCRLPSP 244
Query: 371 RLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHGAAKA 550 R V I A E DLV A+ + P ++F K K++H + TAD+L KI+++FY+GAAK Sbjct: 245 RCVAIDAVVEVDLVSALQVSVFPEVIFTKAGKILHREKVIQTADELSKIMAFFYYGAAKP 304
Query: 551 KMFEGPAEGK 580 G + + Sbjct: 305 PCLNGTGDSQ 314
>tr|A7Q1P7|A7Q1P7_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028550001 PE=4 SV=1 Length = 326
Score = 122 bits (306), Expect = 3e-26 Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 1/183 (0%) Frame = +2
Query: 2 GEDPLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDL 181 G D + +EE+ NW + + GWG + S+ F E IKN +D V E+DW+ Sbjct: 144 GGDKVVVEEESSNWPLDAEVGWGIRASEYF-EQHPIKNVV-----GEDGV----EIDWEG 193
Query: 182 QPETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETK- 358 + ET +++ W S F PSPL+ L++ERY + + + VL+ELE AA W K Sbjct: 194 ELETGWVKEINCLEWESFAF-HPSPLIVLVFERYNRAS-DNWKVLKELEKAAKVYWSAKD 251
Query: 359 RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHG 538 RLPPR VKI + E D+ A+ KE P +LF++G ++++ + + TAD+L+ +I+YFY+ Sbjct: 252 RLPPRTVKIDINIERDMAYALQAKECPQILFLRGNRILYREKDFRTADELVHMIAYFYYN 311
Query: 539 AAK 547 A K Sbjct: 312 AKK 314
>tr|Q9SKB6|Q9SKB6_ARATH Putative uncharacterized protein At2g31840 OS=Arabidopsis thaliana GN=At2g31840 PE=2 SV=1 Length = 350
Score = 121 bits (303), Expect = 6e-26 Identities = 69/188 (36%), Positives = 98/188 (52%), Gaps = 3/188 (1%) Frame = +2
Query: 11 PLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDV---NDIPEMDWDL 181 PL + E+DPNW E DGWG+ + F + IKN KK D D+D + E+ W Sbjct: 150 PLVVNEEDPNW-PEDADGWGFSFNQFFNK-ITIKNEKKEEEDDDEDSEGDDSEKEIVWQD 207
Query: 182 QPETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETKR 361 D+ A W VF D SPL+ L++ RY K+ +E ELE A +W Sbjct: 208 DNYIRPIKDLTTAEWEEAVFKDISPLMVLVHNRY-KRPKENEKFREELEKAIQVIWNCGL 266
Query: 362 LPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHGA 541 PR V + A E DLV A+ + P ++F K K+++ + G TAD+L KI+++FY+GA Sbjct: 267 PSPRCVAVDAVVETDLVSALKVSVFPEIIFTKAGKILYREKGIRTADELSKIMAFFYYGA 326
Query: 542 AKAKMFEG 565 AK G Sbjct: 327 AKPPCLNG 334
>tr|Q5QLS7|Q5QLS7_ORYSJ cDNA clone:J013002F09, full insert sequence OS=Oryza sativa subsp. japonica GN=B1088C09.28 PE=2 SV=1 Length = 317
Score = 121 bits (303), Expect = 6e-26 Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 1/183 (0%) Frame = +2
Query: 2 GEDPLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDL 181 GE +EE+DP+W + D GWG + S+ F ++ N + D V E+DW+ Sbjct: 135 GELKAVVEEEDPSWPLDADIGWGIRASEYF-------DKHSIKNVTVDGV----EIDWER 183
Query: 182 QPETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETK- 358 + E +++ W S F PSPL+ L++ERY + + + L+ELE AA W +K Sbjct: 184 EVEEGWVKEINCLEWESFAF-HPSPLIVLVFERYNRAA-DNWKFLQELEKAAKVYWNSKD 241
Query: 359 RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHG 538 RLPPR VK+ + E DL A+ +KE P LLF++G K+++ + TAD+L+++I++FY+ Sbjct: 242 RLPPRTVKVDMNIERDLAFALQVKECPQLLFLRGNKILYREKELRTADELVQMIAHFYYN 301
Query: 539 AAK 547 A + Sbjct: 302 AKR 304
>tr|Q67XP3|Q67XP3_ARATH Putative uncharacterized protein At4g28590 (Fragment) OS=Arabidopsis thaliana GN=At4g28590 PE=2 SV=1 Length = 327
Score = 119 bits (299), Expect = 2e-25 Identities = 66/182 (36%), Positives = 107/182 (58%), Gaps = 1/182 (0%) Frame = +2
Query: 5 EDPLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDLQ 184 E+ + +EE+DP+W + D GWG K S+ F + IKN +D E+DW+ + Sbjct: 145 EEEMVVEEEDPDWPVDTDVGWGIKASEYF-DTHPIKNVVG---------DDGSEIDWEGE 194
Query: 185 PETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETK-R 361 + +++ W S F PSPLV L++ERY K+ + + L+ELE A W+ K R Sbjct: 195 IDDSWVKEINCLEWESFAF-HPSPLVVLVFERY-KRASDNWKTLKELEKAIKVYWDAKDR 252
Query: 362 LPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHGA 541 LPPR VKI + E DL A+ KE P +LF++G ++++ + + TAD+L+ +I++FY+ A Sbjct: 253 LPPRAVKIDLNIETDLAYALKAKECPQILFLRGNRILYREKDFRTADELVHMIAHFYYKA 312
Query: 542 AK 547 + Sbjct: 313 KR 314
>tr|Q84RF5|Q84RF5_ARATH Putative uncharacterized protein At2g31840/F20M17.12 OS=Arabidopsis thaliana GN=At2g31840/F20M17.12 PE=2 SV=1 Length = 350
Score = 119 bits (297), Expect = 3e-25 Identities = 68/188 (36%), Positives = 97/188 (51%), Gaps = 3/188 (1%) Frame = +2
Query: 11 PLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDV---NDIPEMDWDL 181 PL + E+DPNW E DGWG+ + F + IKN KK D D+D + E+ W Sbjct: 150 PLVVNEEDPNW-PEDADGWGFSFNQFFNK-ITIKNEKKEEEDDDEDSEGDDSEKEIVWQD 207
Query: 182 QPETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETKR 361 D+ A W VF D SPL+ L++ RY K+ +E ELE A +W Sbjct: 208 DNYIRPIKDLTTAEWEEAVFKDISPLMVLVHNRY-KRPKENEKFREELEKAIQVIWNCGL 266
Query: 362 LPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHGA 541 PR V + A E DLV A+ + P ++F K +++ + G TAD+L KI+++FY+GA Sbjct: 267 PSPRCVAVDAVVETDLVSALKVSVFPEIIFTKAGXILYREKGIRTADELSKIMAFFYYGA 326
Query: 542 AKAKMFEG 565 AK G Sbjct: 327 AKPPCLNG 334
>tr|B6TC88|B6TC88_MAIZE Thioredoxin family protein OS=Zea mays PE=2 SV=1 Length = 327
Score = 116 bits (291), Expect = 1e-24 Identities = 65/183 (35%), Positives = 104/183 (56%), Gaps = 1/183 (0%) Frame = +2
Query: 2 GEDPLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDL 181 GE +EE+DP+W + D GWG + S+ F ++ N + D V E+DW+ Sbjct: 146 GEQKPVVEEEDPSWPLDADVGWGIRASEYF-------DKHSIRNVTVDGV----EIDWEG 194
Query: 182 QPETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETK- 358 + +++ W S F PSPLV L++ERY + + + L+ELE AA W K Sbjct: 195 DVDEGWVKEINCLEWESFAF-HPSPLVVLVFERYNRAA-DNWKFLQELEKAAKVYWNAKD 252
Query: 359 RLPPRLVKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYLTADDLLKIISYFYHG 538 RLPPR VK+ + E DL A+ +E P LLF++G K+++ + TAD+L+++I++FY+ Sbjct: 253 RLPPRTVKVDINIERDLAYALQARECPQLLFLRGNKILYREKEIRTADELVQMIAHFYYN 312
Query: 539 AAK 547 A + Sbjct: 313 AKR 315
>tr|A2ZZ71|A2ZZ71_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003843 PE=4 SV=1 Length = 332
Score = 112 bits (279), Expect = 3e-23 Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 16/198 (8%) Frame = +2
Query: 2 GEDPLYIEEDDPNWLDEPDDGWGYKVSDIFKEDFGIKNRKKYNNDSDDDVNDIPEMDWDL 181 GE +EE+DP+W + D GWG + S+ F ++ N + D V E+DW+ Sbjct: 135 GELKAVVEEEDPSWPLDADIGWGIRASEYF-------DKHSIKNVTVDGV----EIDWER 183
Query: 182 QPETFAAVDVDAASWTSTVFGDPSPLVALIYERYGKKGRECYHVLRELEDAANRMWETK- 358 + E +++ W S F PSPL+ L++ERY + + + L+ELE AA W +K Sbjct: 184 EVEEGWVKEINCLEWESFAF-HPSPLIVLVFERYNRAA-DNWKFLQELEKAAKVYWNSKD 241
Query: 359 RLPPRL---------------VKIHASFEEDLVGAIGIKEIPTLLFIKGQKLIHYQSGYL 493 RLPPR+ VK+ + E DL A+ +KE P LLF++G K+++ + Sbjct: 242 RLPPRVIEVVGHMLNLIEFQTVKVDMNIERDLAFALQVKECPQLLFLRGNKILYREKELR 301
Query: 494 TADDLLKIISYFYHGAAK 547 TAD+L+++I++FY+ A + Sbjct: 302 TADELVQMIAHFYYNAKR 319
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