DK952230 |
Clone id |
TST38A01NGRL0013_I13 |
Library |
TST38 |
Length |
518 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_I13. 5' end sequence. |
Accession |
DK952230 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL110Contig2 |
Sequence |
AGGCGAGATGCTGCACATGGGGGGTCATCGCAAAGAAGAAGAGCACCCAGCTCACCCACC ACCGCAATATGCAGGAGACTATGATCCTGGCCATCACGGTGGTGGTGGCGAGCATCATGG TGGGGTGCCCCCCCATGTGGCCGCGGCCTCCTATGATCAGCATGAGCACCCGGGACAGAT GCATGCAGGACCACCCCCTGTTCATGCAGGTTACGGTGGGCTGGAGCAGCAGCAGCACCA CCATGGTGGGGCTCCACCTGCCCATGCCCATGAGCCGCCCCCACCCCACCATGAAGGCCC CATTGAGAAGATGAAACACAAGATGAAGGGTGGCGACGATGACAGCAGCTCCAGCAGCAG CGAAAGTGATGGGGAAGGAGGGCGCAGGAAGAAGAAACATGGCCTCTTCTAAGCAACTTG CTCCTTGCTTGTTTTTGACATGATCTTGTGTTTGTATGTAATGTCGCTTTTCATCTCGGC TATATGAGATGGGTTCAAAATGTGGCTGCATATCGACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q69ZH9 |
Definition |
sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus musculus |
Align length |
33 |
Score (bit) |
31.2 |
E-value |
3.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q941N0 |
Definition |
tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam |
Align length |
26 |
Score (bit) |
36.2 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952230|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_I13, 5' (518 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam ... 36 1.0 tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus... 34 5.0 tr|Q9VYV7|Q9VYV7_DROME Phosphorylase kinase gamma OS=Drosophila ... 33 6.5 tr|Q9I7D0|Q9I7D0_DROME Phosphorylase kinase gamma, isoform A OS=... 33 6.5 tr|Q961E7|Q961E7_DROME Phosphorylase kinase gamma, isoform B OS=... 33 6.5 tr|Q7K4Y9|Q7K4Y9_DROME GH22314p OS=Drosophila melanogaster GN=Ph... 33 6.5 tr|Q29JA5|Q29JA5_DROPS GA14880 OS=Drosophila pseudoobscura pseud... 33 6.5 tr|B4R361|B4R361_DROSI GD17041 OS=Drosophila simulans GN=GD17041... 33 6.5 tr|B4Q1S3|B4Q1S3_DROYA GE15660 OS=Drosophila yakuba GN=GE15660 P... 33 6.5 tr|B4MT15|B4MT15_DROWI GK20076 OS=Drosophila willistoni GN=GK200... 33 6.5 tr|B4MAI4|B4MAI4_DROVI GJ15921 OS=Drosophila virilis GN=GJ15921 ... 33 6.5 tr|B4L681|B4L681_DROMO GI16230 OS=Drosophila mojavensis GN=GI162... 33 6.5 tr|B4JM18|B4JM18_DROGR GH24413 OS=Drosophila grimshawi GN=GH2441... 33 6.5 tr|B4IK49|B4IK49_DROSE GM13103 OS=Drosophila sechellia GN=GM1310... 33 6.5 tr|B4H3T7|B4H3T7_DROPE GL15144 OS=Drosophila persimilis GN=GL151... 33 6.5 tr|B3NUA3|B3NUA3_DROER GG18438 OS=Drosophila erecta GN=GG18438 P... 33 6.5 tr|B3MSC4|B3MSC4_DROAN GF20823 OS=Drosophila ananassae GN=GF2082... 33 6.5 tr|Q47KJ5|Q47KJ5_THEFY Putative transport protein OS=Thermobifid... 33 8.5 tr|A9XE62|A9XE62_SOYBN KS-type dehydrin SLTI629 OS=Glycine max P... 33 8.5 tr|Q5KDR8|Q5KDR8_CRYNE Glutaryl-CoA dehydrogenase, mitochondrial... 33 8.5 tr|Q2U3F4|Q2U3F4_ASPOR Predicted protein OS=Aspergillus oryzae G... 33 8.5
>tr|Q941N0|Q941N0_9FABA Drought-induced protein OS=Retama raetam GN=DIP PE=4 SV=1 Length = 113
Score = 36.2 bits (82), Expect = 1.0 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2
Query: 2 GEMLHMGGHRKEEEHPAHPPPQYAGD 79 GE LH+GGH+KEEEH +Y G+ Sbjct: 9 GETLHVGGHKKEEEHKGEVHGEYKGE 34
>tr|Q6QDC8|Q6QDC8_MOUSE Putative cyclooxygenase 3 OS=Mus musculus GN=Ptgs1 PE=2 SV=1 Length = 127
Score = 33.9 bits (76), Expect = 5.0 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -1
Query: 365 FRCCWSCCHRRHPSSC 318 F CC SCC RRHP SC Sbjct: 43 FPCCCSCCCRRHPRSC 58
>tr|Q9VYV7|Q9VYV7_DROME Phosphorylase kinase gamma OS=Drosophila melanogaster GN=PhKgamma PE=2 SV=2 Length = 560
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242
>tr|Q9I7D0|Q9I7D0_DROME Phosphorylase kinase gamma, isoform A OS=Drosophila melanogaster GN=PhKgamma PE=2 SV=2 Length = 502
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242
>tr|Q961E7|Q961E7_DROME Phosphorylase kinase gamma, isoform B OS=Drosophila melanogaster GN=PhKgamma PE=2 SV=1 Length = 419
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242
>tr|Q7K4Y9|Q7K4Y9_DROME GH22314p OS=Drosophila melanogaster GN=PhKgamma PE=2 SV=1 Length = 560
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242
>tr|Q29JA5|Q29JA5_DROPS GA14880 OS=Drosophila pseudoobscura pseudoobscura GN=GA14880 PE=4 SV=2 Length = 571
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242
>tr|B4R361|B4R361_DROSI GD17041 OS=Drosophila simulans GN=GD17041 PE=4 SV=1 Length = 593
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 224 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 254
>tr|B4Q1S3|B4Q1S3_DROYA GE15660 OS=Drosophila yakuba GN=GE15660 PE=4 SV=1 Length = 606
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242
>tr|B4MT15|B4MT15_DROWI GK20076 OS=Drosophila willistoni GN=GK20076 PE=4 SV=1 Length = 419
Score = 33.5 bits (75), Expect = 6.5 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +3
Query: 72 QETMILAITVVVASIMVGCPPMWPRPPMISM 164 QE I A V++ +++VGCPP W R M+ + Sbjct: 212 QEVDIWACGVIMFTLLVGCPPFWHRKQMVML 242
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