DK952270 |
Clone id |
TST38A01NGRL0013_K08 |
Library |
TST38 |
Length |
599 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_K08. 5' end sequence. |
Accession |
DK952270 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL133Contig1 |
Sequence |
GAGCTTCGGCTCTCTTCTTTCTGCTCCACCTCCGGAGCATATCCCCTTCCATTGCCGTAT CAGTCTCAGCATGGAGAGGGATCTTGCTCTTGGGTGTTCCCAAACTTTGAACACAGCGGT AGTGAGGGCATCTCACCTTCAGAATGCAAGTCGACAGGCTGTTCCATCTCGGCTTCAGTG GAAGCAGAGTTCAATTGGAAATGCTTTCCAGAAGTCACGGTGGCTGATGCCCAGAGTAGG GAAGACGAGTCTCCGGCACTGTGTTGTGAAATCGGACATGACAGCTAGTGCTGCTACAGC ACCTGCTGCCCCACTGTTACTCGAAACACCAAGCGGGCAATTTCTAGCGGAGTTGTTGCA AAGTCATCCTTACCTTGTGTGTGCAGCAGCAGAGCAGCAGCTCGAAACGTTAGCGGAGGC TAGAGACGCAGCAGCCACAAGTCAAGAGCAATCGAGTCCCATGGGCACTGAGATGATTCT TTACAAACGTATAGCAGAGCTTAAAGCACAGGANAGGTGCAAGGCATTAGAGGATATTAT GTATGCTCTCATTTGCGAAAAGTTTGTGGAGGCTGGGATATCCTTTGTTCCACAAATAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8TER5 |
Definition |
sp|Q8TER5|SOLO_HUMAN Protein SOLO OS=Homo sapiens |
Align length |
76 |
Score (bit) |
37.0 |
E-value |
0.076 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LP80 |
Definition |
tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana |
Align length |
88 |
Score (bit) |
82.0 |
E-value |
2.0e-14 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952270|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_K08, 5' (599 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein... 82 2e-14 tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Ar... 82 2e-14 tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, who... 82 3e-14 tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea... 80 7e-14 tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized p... 79 2e-13 tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g1780... 79 2e-13 tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g1780... 79 2e-13 tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Popul... 77 1e-12 tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subs... 74 5e-12 tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert seque... 74 5e-12 tr|A3AM41|A3AM41_ORYSJ Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|A2XLF0|A2XLF0_ORYSI Putative uncharacterized protein OS=Oryza... 74 5e-12 tr|A7PSL3|A7PSL3_VITVI Chromosome chr6 scaffold_28, whole genome... 73 1e-11 tr|A5BNG8|A5BNG8_VITVI Putative uncharacterized protein OS=Vitis... 73 1e-11 tr|B7FJF5|B7FJF5_MEDTR Putative uncharacterized protein OS=Medic... 72 2e-11 tr|A9PF86|A9PF86_POPTR Putative uncharacterized protein OS=Popul... 72 3e-11 tr|B4G0A9|B4G0A9_MAIZE Putative uncharacterized protein OS=Zea m... 71 4e-11 tr|B6TEU7|B6TEU7_MAIZE Putative uncharacterized protein OS=Zea m... 70 7e-11 tr|A7PC12|A7PC12_VITVI Chromosome chr2 scaffold_11, whole genome... 62 2e-08 tr|Q7X6P4|Q7X6P4_ORYSA OSJNBa0006A01.21 protein (OSJNba0093F12.3... 62 3e-08 tr|Q0JAJ2|Q0JAJ2_ORYSJ Os04g0595100 protein OS=Oryza sativa subs... 62 3e-08 tr|Q7X9D6|Q7X9D6_MARQU ABRH7 (Fragment) OS=Marsilea quadrifolia ... 59 2e-07 tr|Q9FVR1|Q9FVR1_ARATH Putative uncharacterized protein F3C3.6 (... 57 1e-06 tr|B8ATK2|B8ATK2_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|B8LKC1|B8LKC1_PICSI Putative uncharacterized protein OS=Picea... 54 5e-06 tr|B6UFZ7|B6UFZ7_MAIZE Putative uncharacterized protein OS=Zea m... 51 6e-05 tr|A4S3L6|A4S3L6_OSTLU Predicted protein OS=Ostreococcus lucimar... 48 4e-04 tr|Q14K79|Q14K79_PLAAC Putative uncharacterized protein (Fragmen... 47 6e-04 tr|Q010E1|Q010E1_OSTTA Homology to unknown gene (Fragment) OS=Os... 46 0.001 tr|A8IKK2|A8IKK2_CHLRE Predicted protein OS=Chlamydomonas reinha... 46 0.002
>tr|Q9LP80|Q9LP80_ARATH T1N15.6 (Putative uncharacterized protein At1g48450) (At1g48450/T1N15_5) OS=Arabidopsis thaliana GN=At1g48450 PE=2 SV=1 Length = 423
Score = 82.0 bits (201), Expect = 2e-14 Identities = 39/88 (44%), Positives = 61/88 (69%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K + Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R +ALE+I+YAL+ +KF++A ++ VP I Sbjct: 153 RRRALEEILYALVVQKFMDANVTLVPSI 180
>tr|Q2V4I1|Q2V4I1_ARATH Uncharacterized protein At1g48450.2 OS=Arabidopsis thaliana GN=At1g48450 PE=4 SV=1 Length = 342
Score = 82.0 bits (201), Expect = 2e-14 Identities = 39/88 (44%), Positives = 61/88 (69%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL+++L SHP+LV RDA S++ SS +GT+++LY+RIAE+K + Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQIDRDAEEQSKDASSVLGTDIVLYRRIAEVKEKE 152
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R +ALE+I+YAL+ +KF++A ++ VP I Sbjct: 153 RRRALEEILYALVVQKFMDANVTLVPSI 180
>tr|A7QTZ7|A7QTZ7_VITVI Chromosome undetermined scaffold_174, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006608001 PE=4 SV=1 Length = 362
Score = 81.6 bits (200), Expect = 3e-14 Identities = 42/88 (47%), Positives = 60/88 (68%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL+++L SHP+LV RDA +E+SS GTE++LY+RIAE+KA Sbjct: 36 GQFLSQILISHPHLVPAAVEQQLEQLQTDRDAEE-HKEESSASGTELVLYRRIAEVKANE 94
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R KALE+I+YAL+ +KF++A +S +P I Sbjct: 95 RKKALEEILYALVVQKFMDANVSLIPTI 122
>tr|B8LPW2|B8LPW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 434
Score = 80.5 bits (197), Expect = 7e-14 Identities = 44/88 (50%), Positives = 59/88 (67%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL++LL+ HP+L+ RDAAA Q+ S TE++LY+RIAE+KA Sbjct: 104 GQFLSQLLKDHPHLLPAAVEQQLERLVADRDAAA-QQDPPSSTSTELVLYRRIAEVKAAE 162
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R KALE+IMYALI +KF++A IS +P I Sbjct: 163 RRKALEEIMYALIVQKFMDARISLIPCI 190
>tr|Q9LVJ0|Q9LVJ0_ARATH Gb|AAF02142.1 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 79.0 bits (193), Expect = 2e-13 Identities = 37/88 (42%), Positives = 58/88 (65%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R + LE+I+YAL+ +KF+EA +S VP + Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSV 189
>tr|Q8W4L9|Q8W4L9_ARATH Putative uncharacterized protein At3g17800; MEB5.2 (Putative uncharacterized protein At3g17800) OS=Arabidopsis thaliana GN=At3g17800/MEB5.2 PE=2 SV=1 Length = 421
Score = 79.0 bits (193), Expect = 2e-13 Identities = 37/88 (42%), Positives = 58/88 (65%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R + LE+I+YAL+ +KF+EA +S VP + Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSV 189
>tr|Q0WNF6|Q0WNF6_ARATH Putative uncharacterized protein At3g17800 OS=Arabidopsis thaliana GN=At3g17800 PE=2 SV=1 Length = 421
Score = 79.0 bits (193), Expect = 2e-13 Identities = 37/88 (42%), Positives = 58/88 (65%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL+++L SHP+LV RD+ +++ +S GT+++LY+RIAELK Sbjct: 102 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSQGQNKDSASVPGTDIVLYRRIAELKENE 161
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R + LE+I+YAL+ +KF+EA +S VP + Sbjct: 162 RRRTLEEILYALVVQKFMEANVSLVPSV 189
>tr|A9PIE4|A9PIE4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 417
Score = 76.6 bits (187), Expect = 1e-12 Identities = 39/88 (44%), Positives = 57/88 (64%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQEQSSPMGTEMILYKRIAELKAQX 514 GQFL+++L SHP+LV RD+ +E S GT+++LY+RIAE KA Sbjct: 93 GQFLSQILVSHPHLVPAAVEQQLEQLQTDRDSEK-QKEDPSATGTDLVLYRRIAEAKAND 151
Query: 515 RCKALEDIMYALICEKFVEAGISFVPQI 598 R KALE+I+YAL+ +KF++A +S +P I Sbjct: 152 RRKALEEILYALVVQKFMDANVSLIPTI 179
>tr|Q10DW0|Q10DW0_ORYSJ Os03g0717900 protein OS=Oryza sativa subsp. japonica GN=Os03g0717900 PE=2 SV=1 Length = 455
Score = 74.3 bits (181), Expect = 5e-12 Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 1/89 (1%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQ-EQSSPMGTEMILYKRIAELKAQ 511 GQFL+++L +HP+L+ RDAA + ++ +P +++LY+RIAE+K + Sbjct: 133 GQFLSQILATHPHLLPAAAEQQLEQLQTDRDAAKDNGGDKPAPSDGDIVLYRRIAEVKEK 192
Query: 512 XRCKALEDIMYALICEKFVEAGISFVPQI 598 R +ALE+I+YAL+ +KFVEAG+S VP + Sbjct: 193 ERKRALEEILYALVVQKFVEAGVSLVPAL 221
>tr|Q10DV9|Q10DV9_ORYSJ cDNA clone:001-023-C09, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os03g50870 PE=2 SV=1 Length = 328
Score = 74.3 bits (181), Expect = 5e-12 Identities = 37/89 (41%), Positives = 60/89 (67%), Gaps = 1/89 (1%) Frame = +2
Query: 335 GQFLAELLQSHPYLVCXXXXXXXXXXXXXRDAAATSQ-EQSSPMGTEMILYKRIAELKAQ 511 GQFL+++L +HP+L+ RDAA + ++ +P +++LY+RIAE+K + Sbjct: 6 GQFLSQILATHPHLLPAAAEQQLEQLQTDRDAAKDNGGDKPAPSDGDIVLYRRIAEVKEK 65
Query: 512 XRCKALEDIMYALICEKFVEAGISFVPQI 598 R +ALE+I+YAL+ +KFVEAG+S VP + Sbjct: 66 ERKRALEEILYALVVQKFVEAGVSLVPAL 94
|