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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK952272
Clone id TST38A01NGRL0013_K10
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_K10. 5' end sequence.
Accession
Tissue type prothallia
Developmental stage gametophyte
Contig ID
Sequence 
AGGAGGCTCCAAAGGAAACCTTGGCGCTCATGCAGGGTTTAAGATTTGAGAGAAATGTTA
CGAGGTTGGCTGCGCGCGACGGCGGTTTGCAGCAAGCATGGTCGAAGGTTCTGTGACAAT
GCGGCAGGAGCGACTGCCAAAGGCGACGTTGATTCAAAGTCCTTCAAGTCTCCACAGAAA
CCTCGCCTTTGGGCAATGGAGAGGGTCTCTAAAACCAAGGCTCAGCGCGTTGCCTCCATG
AAAGCTTGGCGCATCCCTGCCTGCATCGACTTCATGGTTGATTGGCTACCTGAAGGTGTC
GGTTCCCTCCTTTACCTCGATAAGCTGCAAGTGCATCAATTTTACTGGAAACTTGGAGAC
CCTGGTTTCATCTGCACGCCCTTTCAATTGGACATCTATGAGCGGGCTTGGGAAGAACAC
TATGAAAAGGCAAAAGTTCTCGCTTCTGTGGAGCTCTATCCACATCTGATAAATATAAAT
GAAGACGAGGACATTATCAATATCACTCTAGTTAGTCCTAAACATTGGG
■■Homology search results ■■ -
sp_hit_id P05671
Definition sp|P05671|Y113_ADE07 Uncharacterized 11.3 kDa early protein OS=Human adenovirus B serotype 7
Align length 85
Score (bit) 33.1
E-value 0.85
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952272|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_K10, 5'
         (529 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P05671|Y113_ADE07 Uncharacterized 11.3 kDa early protein OS=H...    33   0.85 
sp|Q6FJ28|PALB_CANGA Calpain-like protease palB/RIM13 OS=Candida...    32   1.4  
sp|A5GEW5|ENO_GEOUR Enolase OS=Geobacter uraniireducens (strain ...    32   1.4  
sp|O94565|YGD8_SCHPO Uncharacterized mannosyltransferase C1773.0...    31   4.2  

>sp|P05671|Y113_ADE07 Uncharacterized 11.3 kDa early protein
           OS=Human adenovirus B serotype 7 PE=4 SV=1
          Length = 104

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
 Frame = +1

Query: 1   RRLQRKPWR-SCRV*-----DLREMLRGWLRATAVCSKHGRRFCDNAAGATAKGDVDSKS 162
           R  ++ PW  SC+       D+R ML GWL A A      + +C +   A  K  +   S
Sbjct: 4   RAKKKCPWNDSCKTTIKIWPDVRMMLGGWLIACASNKPDPKTWCSSPPSAVLKLPILISS 63

Query: 163 FKSPQKPRLWAMERVSKTKAQRVAS 237
             +   PR    E+  +T  +R+A+
Sbjct: 64  PAASSHPRKRGKEKKERTPTERLAA 88


>sp|Q6FJ28|PALB_CANGA Calpain-like protease palB/RIM13 OS=Candida
           glabrata GN=RIM13 PE=3 SV=1
          Length = 713

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -2

Query: 330 LQLIEVKEGTDTFR*PINHEVDAGRDAPSFHGGNA-LSLGFRDPLHCPKARFLWRLEGL 157
           L+LI ++E  +T +  I+H VD   +       NA L LG +    CPKAR +W+   +
Sbjct: 14  LKLIYLEENKETCQREIDHLVDTAIELKEKTYSNAVLDLGRQFREVCPKARIMWKTSSI 72


>sp|A5GEW5|ENO_GEOUR Enolase OS=Geobacter uraniireducens (strain
           Rf4) GN=eno PE=3 SV=1
          Length = 429

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -1

Query: 409 KPAHRCPIERACR*NQGLQVSSKIDALAAYRGK 311
           K    C  +R C+ NQ L++  ++DA+A +RGK
Sbjct: 389 KTGSLCRTDRVCKYNQLLRIEDELDAVALFRGK 421


>sp|O94565|YGD8_SCHPO Uncharacterized mannosyltransferase C1773.08c
           OS=Schizosaccharomyces pombe GN=SPBC1773.08c PE=2 SV=1
          Length = 391

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -2

Query: 372 DETRVSKFPVKLMHLQLIEVKEGT---DTFR*PINHEVDAGRDAPSFHGGNALSLGFRDP 202
           DE    KF   ++ L    V+ GT   DTF  P N +VDA R+A +  G   +  G  + 
Sbjct: 83  DEPFDEKFKETILKLTSANVEFGTLEKDTFGFPGNVDVDAAREAIASQGDRGIMYGDTES 142

Query: 201 LH 196
            H
Sbjct: 143 YH 144
tr_hit_id B0DGZ5
Definition tr|B0DGZ5|B0DGZ5_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82)
Align length 95
Score (bit) 34.3
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK952272|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0013_K10, 5'
         (529 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0DGZ5|B0DGZ5_LACBS Predicted protein OS=Laccaria bicolor (st...    34   4.0  
tr|B1G2S2|B1G2S2_9BURK Putative uncharacterized protein OS=Burkh...    34   5.3  
tr|B2T6C9|B2T6C9_BURPP Putative uncharacterized protein OS=Burkh...    33   6.9  
tr|B6KL24|B6KL24_TOXGO EF hand domain-containing protein OS=Toxo...    33   6.9  
tr|Q63RP9|Q63RP9_BURPS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|Q62HV9|Q62HV9_BURMA Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|Q3JPN2|Q3JPN2_BURP1 Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A3NY81|A3NY81_BURP0 Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A3NCF2|A3NCF2_BURP6 Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A3MMQ6|A3MMQ6_BURM7 Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A2S9E1|A2S9E1_BURM9 Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A1V1L2|A1V1L2_BURMS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|B7CKH2|B7CKH2_BURPS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|B2GZ28|B2GZ28_BURPS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|B1HE56|B1HE56_BURPS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A9K1U4|A9K1U4_BURMA Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A8KWZ1|A8KWZ1_BURPS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A8EHA1|A8EHA1_BURPS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A5XU49|A5XU49_BURMA Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A5TF41|A5TF41_BURMA Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A5J867|A5J867_BURMA Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|A4ME11|A4ME11_BURPS Putative uncharacterized protein OS=Burkh...    33   9.0  
tr|Q7S9E7|Q7S9E7_NEUCR Predicted protein OS=Neurospora crassa GN...    33   9.0  

>tr|B0DGZ5|B0DGZ5_LACBS Predicted protein OS=Laccaria bicolor (strain
            S238N-H82) GN=LACBIDRAFT_300533 PE=4 SV=1
          Length = 1829

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
 Frame = +2

Query: 68   GCARRRFAASMVEGSVTMRQER------LPKATLIQSPSSLHRNLAFGQWRGSLKPRLSA 229
            G A ++  A +V+GS T+  +       LP A     PSS+H +L   Q+   L P  SA
Sbjct: 1605 GAAIQQDQAIIVQGSPTLGHQSRSIDAPLPLANCNAPPSSMHSDLPSPQFGTLLPPTDSA 1664

Query: 230  LPP*KLGASLPASTSWL--IGYLKVSVPSFTSISC 328
              P + GA LP+    +     L  S PS  S+ C
Sbjct: 1665 PLPAEFGAPLPSVDLGVPAPAELDTSPPSARSLPC 1699


>tr|B1G2S2|B1G2S2_9BURK Putative uncharacterized protein
           OS=Burkholderia graminis C4D1M GN=BgramDRAFT_3600 PE=4
           SV=1
          Length = 195

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +1

Query: 232 ASMKAWRIPACIDFMVDWLPEGVGSLLY-LDKLQVHQF---YWKLGDPGFICTPFQLDIY 399
           A+ + +R+  CIDF+ DWL +   +++   D L+VH F    W     G +  P      
Sbjct: 78  ATKRGYRL--CIDFVYDWLVDAHQNVVIPRDMLRVHPFSVQTWDAQSSGTVIKPIAEGAL 135

Query: 400 ERAWEEHYEKAK 435
           E+ W E   K K
Sbjct: 136 EKRWAELTGKRK 147


>tr|B2T6C9|B2T6C9_BURPP Putative uncharacterized protein
           OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
           GN=Bphyt_3097 PE=4 SV=1
          Length = 161

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +1

Query: 232 ASMKAWRIPACIDFMVDWLPEG-VGSLLYLDKLQVHQF---YWKLGDPGFICTPFQLDIY 399
           A+ + +R+  CIDF+ DWL +   G ++  + L+ H+F    W     G +  P      
Sbjct: 78  ATKRGYRL--CIDFVYDWLVDAHEGVVIPREMLRTHRFSVQTWDAQSSGTVIKPMAEGAL 135

Query: 400 ERAWEEHYEKAK 435
           E+ W E   K K
Sbjct: 136 EKRWAELTGKRK 147


>tr|B6KL24|B6KL24_TOXGO EF hand domain-containing protein
           OS=Toxoplasma gondii ME49 GN=TGME49_092050 PE=4 SV=1
          Length = 817

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 115 DNAAGATAKGDVDSKSFKSPQKPRLWAMERVSKTKAQRVASMKAWRIP-ACID 270
           D  AG+T +GD   K+  SPQ  R+     V++     VAS  +  +P AC++
Sbjct: 219 DRRAGSTERGDAGLKTGSSPQASRISPPREVTRDPCSTVASSTSPSVPSACVE 271


>tr|Q63RP9|Q63RP9_BURPS Putative uncharacterized protein
           OS=Burkholderia pseudomallei GN=BPSL2622 PE=4 SV=1
          Length = 152

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 262 CIDFMVDWLPEGVGSLLY-LDKLQVHQF---YWKLGDPGFICTPFQLDIYERAWEEHYEK 429
           CIDF+ DWL +G   ++   D L+VH F    W     G    P      E+ W E   K
Sbjct: 86  CIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGK 145

Query: 430 AK 435
            K
Sbjct: 146 RK 147


>tr|Q62HV9|Q62HV9_BURMA Putative uncharacterized protein
           OS=Burkholderia mallei GN=BMA2141 PE=4 SV=1
          Length = 152

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 262 CIDFMVDWLPEGVGSLLY-LDKLQVHQF---YWKLGDPGFICTPFQLDIYERAWEEHYEK 429
           CIDF+ DWL +G   ++   D L+VH F    W     G    P      E+ W E   K
Sbjct: 86  CIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGK 145

Query: 430 AK 435
            K
Sbjct: 146 RK 147


>tr|Q3JPN2|Q3JPN2_BURP1 Putative uncharacterized protein
           OS=Burkholderia pseudomallei (strain 1710b)
           GN=BURPS1710b_3098 PE=4 SV=1
          Length = 152

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 262 CIDFMVDWLPEGVGSLLY-LDKLQVHQF---YWKLGDPGFICTPFQLDIYERAWEEHYEK 429
           CIDF+ DWL +G   ++   D L+VH F    W     G    P      E+ W E   K
Sbjct: 86  CIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGK 145

Query: 430 AK 435
            K
Sbjct: 146 RK 147


>tr|A3NY81|A3NY81_BURP0 Putative uncharacterized protein
           OS=Burkholderia pseudomallei (strain 1106a)
           GN=BURPS1106A_3063 PE=4 SV=1
          Length = 152

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 262 CIDFMVDWLPEGVGSLLY-LDKLQVHQF---YWKLGDPGFICTPFQLDIYERAWEEHYEK 429
           CIDF+ DWL +G   ++   D L+VH F    W     G    P      E+ W E   K
Sbjct: 86  CIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGK 145

Query: 430 AK 435
            K
Sbjct: 146 RK 147


>tr|A3NCF2|A3NCF2_BURP6 Putative uncharacterized protein
           OS=Burkholderia pseudomallei (strain 668)
           GN=BURPS668_3010 PE=4 SV=1
          Length = 152

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 262 CIDFMVDWLPEGVGSLLY-LDKLQVHQF---YWKLGDPGFICTPFQLDIYERAWEEHYEK 429
           CIDF+ DWL +G   ++   D L+VH F    W     G    P      E+ W E   K
Sbjct: 86  CIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGK 145

Query: 430 AK 435
            K
Sbjct: 146 RK 147


>tr|A3MMQ6|A3MMQ6_BURM7 Putative uncharacterized protein
           OS=Burkholderia mallei (strain NCTC 10247)
           GN=BMA10247_2011 PE=4 SV=1
          Length = 152

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 262 CIDFMVDWLPEGVGSLLY-LDKLQVHQF---YWKLGDPGFICTPFQLDIYERAWEEHYEK 429
           CIDF+ DWL +G   ++   D L+VH F    W     G    P      E+ W E   K
Sbjct: 86  CIDFVYDWLVDGHSEVVIPRDALRVHPFSVQTWDAQTSGTSIKPVAEGALEKRWAELTGK 145

Query: 430 AK 435
            K
Sbjct: 146 RK 147