DK952288 |
Clone id |
TST38A01NGRL0013_L02 |
Library |
TST38 |
Length |
582 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST38A01NGRL0013_L02. 5' end sequence. |
Accession |
DK952288 |
Tissue type |
prothallia |
Developmental stage |
gametophyte |
Contig ID |
CL36Contig1 |
Sequence |
CTGCTGCGGAATACTCGTCGGCGACAGCCATGGGTCGAAGACCTGCAAGGTGCTACCGGC AGATTAAAAACAAGCCATATCCAAAATCTCGTTACTGTAGGGGTGTACCCGACCCAAAAA TTCGTATATATGATGTTGGCATGAAGAAAAAGGGTGTTGATGAGTTTCCCTTTTGTGTGC ACCTTGTGAGTTGGGAGAAAGAAAATGTCTCCAGTGAAGGCCTGGAGGCAGCTCGTATTG CTTGCAACAAATACATGACAAAATTTGCTGGAAAGGATGCTTTTCATCTACGAGTTCGCG TGCACCCTTTCCATGTTCTTCGTATCAACAAGATGCTTTCATGTGCCGGAGCTGATAGGC TCCAGACAGGAATGAGGGGTGCTTTTGGAAAGCCCCAGGGCACTTGTGCGCGAGTTGACA TTGGGCAGGTCCTATTGAGCGTCCGCTGCAAGGACAATAATGGTATACATGCCCAGGAGG CCTTGCGTCGCGCTAAGTTCAAATTTCCTGGAAGGCAGAAGATTATTGTGAGCCGAAAAT GGGGATTCACCAAATTTTCTCGAACTGACTACTTGAAGTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SPB3 |
Definition |
sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia |
Align length |
184 |
Score (bit) |
371.0 |
E-value |
1.0e-102 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QTC5 |
Definition |
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
184 |
Score (bit) |
376.0 |
E-value |
1.0e-103 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK952288|Adiantum capillus-veneris mRNA, clone: TST38A01NGRL0013_L02, 5' (582 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genom... 376 e-103 tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var.... 371 e-101 tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella paten... 370 e-101 tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella paten... 370 e-101 tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella paten... 370 e-101 tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=Q... 370 e-101 tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var.... 369 e-101 tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2... 369 e-101 tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 367 e-100 tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 367 e-100 tr|B4FPT8|B4FPT8_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 367 e-100 tr|B6TD86|B6TD86_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 366 e-100 tr|Q3SC85|Q3SC85_SOLLC 60S ribosomal protein L10 OS=Solanum lyco... 365 e-100 tr|A7NXZ2|A7NXZ2_VITVI Chromosome chr6 scaffold_3, whole genome ... 365 e-99 tr|Q38HS5|Q38HS5_SOLTU 60S ribosomal protein L10-like protein OS... 364 2e-99 tr|B6UGR9|B6UGR9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays P... 364 2e-99 tr|A9P8W6|A9P8W6_POPTR Putative uncharacterized protein OS=Popul... 364 2e-99 tr|A9PGG5|A9PGG5_POPTR Putative uncharacterized protein OS=Popul... 362 6e-99 tr|B7FGF8|B7FGF8_MEDTR Putative uncharacterized protein OS=Medic... 362 8e-99 tr|A9RCU9|A9RCU9_PHYPA Predicted protein (Fragment) OS=Physcomit... 362 8e-99 tr|B7E5G0|B7E5G0_ORYSJ cDNA clone:001-035-D11, full insert seque... 358 9e-98 tr|A9NPP8|A9NPP8_PICSI Putative uncharacterized protein OS=Picea... 357 3e-97 tr|B7EBT7|B7EBT7_ORYSJ cDNA clone:002-188-A02, full insert seque... 356 6e-97 tr|A3B0D3|A3B0D3_ORYSJ Putative uncharacterized protein OS=Oryza... 356 6e-97 tr|A9NPT9|A9NPT9_PICSI Putative uncharacterized protein OS=Picea... 353 3e-96 tr|Q2HIH6|Q2HIH6_ARATH At1g26910 OS=Arabidopsis thaliana PE=2 SV=1 350 3e-95 tr|A2XGB9|A2XGB9_ORYSI Putative uncharacterized protein OS=Oryza... 334 2e-90 tr|Q10LW7|Q10LW7_ORYSJ 60S ribosomal protein L10, putative, expr... 332 1e-89 tr|B8AYH0|B8AYH0_ORYSI Putative uncharacterized protein OS=Oryza... 325 9e-88 tr|Q0DS57|Q0DS57_ORYSJ Os03g0332500 protein OS=Oryza sativa subs... 323 3e-87
>tr|A7QTC5|A7QTC5_VITVI Chromosome chr1 scaffold_166, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006249001 PE=4 SV=1 Length = 224
Score = 376 bits (965), Expect = e-103 Identities = 178/184 (96%), Positives = 180/184 (97%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQGTCARV+IGQVLLSVRCKD NG HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
Query: 570 YLKW 581 Y+KW Sbjct: 181 YVKW 184
>tr|B3TLM0|B3TLM0_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 371 bits (953), Expect = e-101 Identities = 176/184 (95%), Positives = 179/184 (97%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYM K+AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRMRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQGTCARV IGQVLLSVRCKD+N HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDSNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180
Query: 570 YLKW 581 YLKW Sbjct: 181 YLKW 184
>tr|A9U2S2|A9U2S2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227764 PE=4 SV=1 Length = 223
Score = 370 bits (950), Expect = e-101 Identities = 173/184 (94%), Positives = 179/184 (97%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 570 YLKW 581 Y+KW Sbjct: 181 YVKW 184
>tr|A9TWJ0|A9TWJ0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172372 PE=4 SV=1 Length = 223
Score = 370 bits (950), Expect = e-101 Identities = 173/184 (94%), Positives = 179/184 (97%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 570 YLKW 581 Y+KW Sbjct: 181 YVKW 184
>tr|A9RQA3|A9RQA3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177230 PE=4 SV=1 Length = 223
Score = 370 bits (950), Expect = e-101 Identities = 173/184 (94%), Positives = 179/184 (97%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQG CARV IGQVLLSVRCKD NG+HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+R D Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDQNGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFARVD 180
Query: 570 YLKW 581 Y+KW Sbjct: 181 YVKW 184
>tr|Q6DV76|Q6DV76_9FABA QM family protein OS=Caragana jubata GN=QM PE=2 SV=1 Length = 216
Score = 370 bits (949), Expect = e-101 Identities = 174/184 (94%), Positives = 179/184 (97%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKY+TKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYLTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTK++RTD Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKYNRTD 180
Query: 570 YLKW 581 YL+W Sbjct: 181 YLRW 184
>tr|Q9FUN3|Q9FUN3_ELAGV QM-like protein OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 224
Score = 369 bits (948), Expect = e-101 Identities = 174/184 (94%), Positives = 178/184 (96%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKII+SRKWGFTKF+RTD Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIISRKWGFTKFNRTD 180
Query: 570 YLKW 581 YL+W Sbjct: 181 YLRW 184
>tr|Q6DV42|Q6DV42_CAMSI QM-like protein OS=Camellia sinensis PE=2 SV=1 Length = 216
Score = 369 bits (946), Expect = e-101 Identities = 174/184 (94%), Positives = 178/184 (96%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRIN MLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINTMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQGTCARV IGQVLLSVRCKD N HAQEALRRAKFKFPGRQKIIVSRKWGFTK++RTD Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKYNRTD 180
Query: 570 YLKW 581 YL+W Sbjct: 181 YLRW 184
>tr|B6TAQ2|B6TAQ2_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 367 bits (942), Expect = e-100 Identities = 174/184 (94%), Positives = 178/184 (96%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWGFTKFSR+D Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGFTKFSRSD 180
Query: 570 YLKW 581 YLK+ Sbjct: 181 YLKY 184
>tr|B6T5B9|B6T5B9_MAIZE 60S ribosomal protein L10-3 OS=Zea mays PE=2 SV=1 Length = 220
Score = 367 bits (941), Expect = e-100 Identities = 174/184 (94%), Positives = 177/184 (96%) Frame = +3
Query: 30 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 209 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 210 SSEGLEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 389 SSE LEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 390 KPQGTCARVDIGQVLLSVRCKDNNGIHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 569 KPQGTCARVDIGQVLLSVRCKDNN HA EALRRAKFKFPGRQKII SRKWGFTKFSR D Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPGRQKIIESRKWGFTKFSRAD 180
Query: 570 YLKW 581 YLK+ Sbjct: 181 YLKY 184
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